BLASTX nr result

ID: Coptis25_contig00021301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021301
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36924.1| unknown [Lotus japonicus]                              159   1e-58
ref|XP_003523891.1| PREDICTED: transmembrane protein 147-like [G...   158   9e-58
ref|XP_003602965.1| Transmembrane protein [Medicago truncatula] ...   158   9e-58
ref|NP_001236446.1| uncharacterized protein LOC100500074 [Glycin...   158   9e-58
gb|ACU16691.1| unknown [Glycine max]                                  158   9e-58

>gb|AFK36924.1| unknown [Lotus japonicus]
          Length = 228

 Score =  159 bits (402), Expect(2) = 1e-58
 Identities = 75/82 (91%), Positives = 80/82 (97%)
 Frame = +3

Query: 222 LVCLATFLKVTETDSFDPYQELLKALIGFIDFAGLYYALTQLTHRNISQTHKFQAVGLGW 401
           L+CLATFLKV+E+DSFDPYQE+LKALIGFID AGLY+ALTQLTHRNISQ HKFQAVGLGW
Sbjct: 50  LICLATFLKVSESDSFDPYQEILKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGW 109

Query: 402 AFADSVLHRLAPLWVGARGLEF 467
           AFADSVLHRLAPLWVGARGLEF
Sbjct: 110 AFADSVLHRLAPLWVGARGLEF 131



 Score = 92.4 bits (228), Expect(2) = 1e-58
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = +2

Query: 2   MTVFHFFNCALLTFGPHAIYYSATPLSEYDTLGTCIKTAVVYLITA 139
           MTVFHFFNCA+LTFGPHA+YYSATPLSEYDTLGT IKTAVVYL TA
Sbjct: 1   MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSIKTAVVYLATA 46


>ref|XP_003523891.1| PREDICTED: transmembrane protein 147-like [Glycine max]
          Length = 228

 Score =  158 bits (400), Expect(2) = 9e-58
 Identities = 75/82 (91%), Positives = 79/82 (96%)
 Frame = +3

Query: 222 LVCLATFLKVTETDSFDPYQELLKALIGFIDFAGLYYALTQLTHRNISQTHKFQAVGLGW 401
           L+CLATFLKV+E+DSFDPYQE LKALIGFID AGLY+ALTQLTHRNISQ HKFQAVGLGW
Sbjct: 50  LICLATFLKVSESDSFDPYQEFLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGW 109

Query: 402 AFADSVLHRLAPLWVGARGLEF 467
           AFADSVLHRLAPLWVGARGLEF
Sbjct: 110 AFADSVLHRLAPLWVGARGLEF 131



 Score = 90.5 bits (223), Expect(2) = 9e-58
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = +2

Query: 2   MTVFHFFNCALLTFGPHAIYYSATPLSEYDTLGTCIKTAVVYLITA 139
           MTVFHFFNCA+LTFGPHA+YYSATPLSEYDTLGT IK AVVYL TA
Sbjct: 1   MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSIKAAVVYLATA 46


>ref|XP_003602965.1| Transmembrane protein [Medicago truncatula]
           gi|355492013|gb|AES73216.1| Transmembrane protein
           [Medicago truncatula] gi|388506726|gb|AFK41429.1|
           unknown [Medicago truncatula]
          Length = 228

 Score =  158 bits (400), Expect(2) = 9e-58
 Identities = 75/82 (91%), Positives = 79/82 (96%)
 Frame = +3

Query: 222 LVCLATFLKVTETDSFDPYQELLKALIGFIDFAGLYYALTQLTHRNISQTHKFQAVGLGW 401
           L+CLATFLKV+E+DSFDPYQE LKALIGFID AGLY+ALTQLTHRNISQ HKFQAVGLGW
Sbjct: 50  LICLATFLKVSESDSFDPYQEFLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGW 109

Query: 402 AFADSVLHRLAPLWVGARGLEF 467
           AFADSVLHRLAPLWVGARGLEF
Sbjct: 110 AFADSVLHRLAPLWVGARGLEF 131



 Score = 90.5 bits (223), Expect(2) = 9e-58
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = +2

Query: 2   MTVFHFFNCALLTFGPHAIYYSATPLSEYDTLGTCIKTAVVYLITA 139
           MTVFHFFNCA+LTFGPHA+YYSATPLSEYDTLGT IK AVVYL TA
Sbjct: 1   MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSIKAAVVYLATA 46


>ref|NP_001236446.1| uncharacterized protein LOC100500074 [Glycine max]
           gi|255628973|gb|ACU14831.1| unknown [Glycine max]
          Length = 228

 Score =  158 bits (400), Expect(2) = 9e-58
 Identities = 75/82 (91%), Positives = 79/82 (96%)
 Frame = +3

Query: 222 LVCLATFLKVTETDSFDPYQELLKALIGFIDFAGLYYALTQLTHRNISQTHKFQAVGLGW 401
           L+CLATFLKV+E+DSFDPYQE LKALIGFID AGLY+ALTQLTHRNISQ HKFQAVGLGW
Sbjct: 50  LICLATFLKVSESDSFDPYQEFLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGW 109

Query: 402 AFADSVLHRLAPLWVGARGLEF 467
           AFADSVLHRLAPLWVGARGLEF
Sbjct: 110 AFADSVLHRLAPLWVGARGLEF 131



 Score = 90.5 bits (223), Expect(2) = 9e-58
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = +2

Query: 2   MTVFHFFNCALLTFGPHAIYYSATPLSEYDTLGTCIKTAVVYLITA 139
           MTVFHFFNCA+LTFGPHA+YYSATPLSEYDTLGT IK AVVYL TA
Sbjct: 1   MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSIKAAVVYLATA 46


>gb|ACU16691.1| unknown [Glycine max]
          Length = 159

 Score =  158 bits (400), Expect(2) = 9e-58
 Identities = 75/82 (91%), Positives = 79/82 (96%)
 Frame = +3

Query: 222 LVCLATFLKVTETDSFDPYQELLKALIGFIDFAGLYYALTQLTHRNISQTHKFQAVGLGW 401
           L+CLATFLKV+E+DSFDPYQE LKALIGFID AGLY+ALTQLTHRNISQ HKFQAVGLGW
Sbjct: 50  LICLATFLKVSESDSFDPYQEFLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGW 109

Query: 402 AFADSVLHRLAPLWVGARGLEF 467
           AFADSVLHRLAPLWVGARGLEF
Sbjct: 110 AFADSVLHRLAPLWVGARGLEF 131



 Score = 90.5 bits (223), Expect(2) = 9e-58
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = +2

Query: 2   MTVFHFFNCALLTFGPHAIYYSATPLSEYDTLGTCIKTAVVYLITA 139
           MTVFHFFNCA+LTFGPHA+YYSATPLSEYDTLGT IK AVVYL TA
Sbjct: 1   MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSIKAAVVYLATA 46


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