BLASTX nr result

ID: Coptis25_contig00021298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021298
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34509.3| unnamed protein product [Vitis vinifera]              481   e-134
ref|XP_002265207.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   481   e-134
ref|XP_002299456.1| predicted protein [Populus trichocarpa] gi|2...   476   e-132
ref|XP_002303661.1| predicted protein [Populus trichocarpa] gi|2...   476   e-132
ref|XP_002518849.1| 3-oxoacyl-[acyl-carrier-protein] synthase, p...   471   e-131

>emb|CBI34509.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  481 bits (1238), Expect = e-134
 Identities = 234/285 (82%), Positives = 264/285 (92%), Gaps = 1/285 (0%)
 Frame = +3

Query: 3   GFLCSSTRRARPVRVINS-TTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGE 179
           G + S  R+ R +R + S T SAPKREKDPKKR+VITGMGLVSVFG+D+ TFYD+LL G 
Sbjct: 45  GSISSPARKCRTIRAVASPTVSAPKREKDPKKRIVITGMGLVSVFGSDIDTFYDKLLQGV 104

Query: 180 SGISPIDRFDASTFSVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKKALEDASLG 359
           SGIS IDRFDAS FSVRF GQIRDFSS+GYIDGKNDRRLDDCWRYC+VAG++AL++ASLG
Sbjct: 105 SGISLIDRFDASNFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALDNASLG 164

Query: 360 PGVLDTMDKSKIGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAI 539
             VL+TMD+S+IGVLVG+GMGGL+AFS+GVE+L  KG+KKI+PFFIPYSITNMGSALLAI
Sbjct: 165 TEVLETMDRSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAI 224

Query: 540 DTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATGVGGFIACRAL 719
           DTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMV GGTEAA++ATGVGGFIACRAL
Sbjct: 225 DTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIMATGVGGFIACRAL 284

Query: 720 SQRNDEPQRASRPWDKDRDGFVIGEGAGVLIMESLEHAMKRGANI 854
           SQRN++PQ+ASRPWDKDRDGFV+GEG+GVLIMESLEHAMKRGANI
Sbjct: 285 SQRNEDPQKASRPWDKDRDGFVMGEGSGVLIMESLEHAMKRGANI 329


>ref|XP_002265207.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I,
           chloroplastic-like [Vitis vinifera]
          Length = 453

 Score =  481 bits (1238), Expect = e-134
 Identities = 234/285 (82%), Positives = 264/285 (92%), Gaps = 1/285 (0%)
 Frame = +3

Query: 3   GFLCSSTRRARPVRVINS-TTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGE 179
           G + S  R+ R +R + S T SAPKREKDPKKR+VITGMGLVSVFG+D+ TFYD+LL G 
Sbjct: 10  GSISSPARKCRTIRAVASPTVSAPKREKDPKKRIVITGMGLVSVFGSDIDTFYDKLLQGV 69

Query: 180 SGISPIDRFDASTFSVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKKALEDASLG 359
           SGIS IDRFDAS FSVRF GQIRDFSS+GYIDGKNDRRLDDCWRYC+VAG++AL++ASLG
Sbjct: 70  SGISLIDRFDASNFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALDNASLG 129

Query: 360 PGVLDTMDKSKIGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAI 539
             VL+TMD+S+IGVLVG+GMGGL+AFS+GVE+L  KG+KKI+PFFIPYSITNMGSALLAI
Sbjct: 130 TEVLETMDRSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAI 189

Query: 540 DTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATGVGGFIACRAL 719
           DTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMV GGTEAA++ATGVGGFIACRAL
Sbjct: 190 DTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIMATGVGGFIACRAL 249

Query: 720 SQRNDEPQRASRPWDKDRDGFVIGEGAGVLIMESLEHAMKRGANI 854
           SQRN++PQ+ASRPWDKDRDGFV+GEG+GVLIMESLEHAMKRGANI
Sbjct: 250 SQRNEDPQKASRPWDKDRDGFVMGEGSGVLIMESLEHAMKRGANI 294


>ref|XP_002299456.1| predicted protein [Populus trichocarpa] gi|222846714|gb|EEE84261.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  476 bits (1225), Expect = e-132
 Identities = 231/279 (82%), Positives = 262/279 (93%), Gaps = 1/279 (0%)
 Frame = +3

Query: 21  TRRARPVR-VINSTTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGESGISPI 197
           T ++R +R +++ T SAPKREKDPKKRVVITGMGLVSVFG+ + TFYD+LL GESGIS I
Sbjct: 58  TSKSRTIRAMVSQTVSAPKREKDPKKRVVITGMGLVSVFGSGIDTFYDKLLEGESGISLI 117

Query: 198 DRFDASTFSVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKKALEDASLGPGVLDT 377
           DRFDAS+FSVRFAGQIRDFSS+GYIDGKNDRRLDDCWRYC+VAGK+ALEDA+LG  VL+ 
Sbjct: 118 DRFDASSFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALEDANLGSEVLEN 177

Query: 378 MDKSKIGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAIDTGLMG 557
           MD+++IGVLVGTGMGGL+AFS+GVESL  KG+KK+SPFFIPYSITNMGSALLAIDTGLMG
Sbjct: 178 MDRTRIGVLVGTGMGGLTAFSNGVESLVQKGYKKMSPFFIPYSITNMGSALLAIDTGLMG 237

Query: 558 PNYSISTACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATGVGGFIACRALSQRNDE 737
           PNYSISTACATANYCFY+AANHIRRGEADIMV GGTEA+VI  GVGGFIACRALSQRN++
Sbjct: 238 PNYSISTACATANYCFYSAANHIRRGEADIMVAGGTEASVIPAGVGGFIACRALSQRNED 297

Query: 738 PQRASRPWDKDRDGFVIGEGAGVLIMESLEHAMKRGANI 854
           P++ASRPWDKDRDGFV+GEG+GVLIMESL+HAMKRGANI
Sbjct: 298 PKKASRPWDKDRDGFVMGEGSGVLIMESLDHAMKRGANI 336


>ref|XP_002303661.1| predicted protein [Populus trichocarpa] gi|222841093|gb|EEE78640.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  476 bits (1224), Expect = e-132
 Identities = 230/270 (85%), Positives = 257/270 (95%)
 Frame = +3

Query: 45  VINSTTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGESGISPIDRFDASTFS 224
           +++ T SAPKREKDPKKRVVITGMGLVSVFG+D+ TFY++LL GESGIS IDRFDAS+FS
Sbjct: 1   MVSQTVSAPKREKDPKKRVVITGMGLVSVFGSDIDTFYNKLLEGESGISLIDRFDASSFS 60

Query: 225 VRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKKALEDASLGPGVLDTMDKSKIGVL 404
           VRFAGQIRDFSS+GYIDGKNDRRLDDCWRYC+VAGK+AL DA+LG  +L+ MD+++IGVL
Sbjct: 61  VRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALVDANLGSELLENMDRTRIGVL 120

Query: 405 VGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAIDTGLMGPNYSISTAC 584
           VGTGMGGL+AFS+GVESL  KG+KKISPFFIPYSITNMGSALLAIDTGLMGPNYSISTAC
Sbjct: 121 VGTGMGGLTAFSNGVESLVQKGYKKISPFFIPYSITNMGSALLAIDTGLMGPNYSISTAC 180

Query: 585 ATANYCFYAAANHIRRGEADIMVTGGTEAAVIATGVGGFIACRALSQRNDEPQRASRPWD 764
           ATANYCFYAAANHIRRGEADIMV GGTEAAV+ TGVGGFIACRALSQRN++P++ASRPWD
Sbjct: 181 ATANYCFYAAANHIRRGEADIMVAGGTEAAVMPTGVGGFIACRALSQRNEDPKKASRPWD 240

Query: 765 KDRDGFVIGEGAGVLIMESLEHAMKRGANI 854
           KDRDGFV+GEG+GVLIMESLEHAMKRGANI
Sbjct: 241 KDRDGFVMGEGSGVLIMESLEHAMKRGANI 270


>ref|XP_002518849.1| 3-oxoacyl-[acyl-carrier-protein] synthase, putative [Ricinus
           communis] gi|223541836|gb|EEF43382.1|
           3-oxoacyl-[acyl-carrier-protein] synthase, putative
           [Ricinus communis]
          Length = 485

 Score =  471 bits (1212), Expect = e-131
 Identities = 231/285 (81%), Positives = 263/285 (92%), Gaps = 1/285 (0%)
 Frame = +3

Query: 3   GFLCSSTRRARPVRVINSTT-SAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGE 179
           GFL +   ++  ++ + S   SAPKRE+DPKKRVVITGMGLVSVFG+D+ TFY++LL GE
Sbjct: 42  GFLFTLAPKSGIIKAMASPNISAPKRERDPKKRVVITGMGLVSVFGSDIDTFYNKLLEGE 101

Query: 180 SGISPIDRFDASTFSVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKKALEDASLG 359
           SGIS IDRFDAS FSVRFAGQIRDFSS+GYIDGKNDRRLDDCWRYC+VAGK+AL+DA+LG
Sbjct: 102 SGISLIDRFDASGFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALDDANLG 161

Query: 360 PGVLDTMDKSKIGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAI 539
             VL+ MD++KIGVL+GTGMGGL+AFS+GVE+L  KG+KKI+PFFIPYSITNMGSALLAI
Sbjct: 162 SQVLEDMDRTKIGVLIGTGMGGLTAFSNGVEALVQKGYKKITPFFIPYSITNMGSALLAI 221

Query: 540 DTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATGVGGFIACRAL 719
           DTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMV GGTEAAV+ TGVGGFIACRAL
Sbjct: 222 DTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVVGGTEAAVMPTGVGGFIACRAL 281

Query: 720 SQRNDEPQRASRPWDKDRDGFVIGEGAGVLIMESLEHAMKRGANI 854
           SQRN++P+RASRPWDK+RDGFV+GEGAGVLIMESL+HAMKRGANI
Sbjct: 282 SQRNEDPKRASRPWDKNRDGFVMGEGAGVLIMESLDHAMKRGANI 326


Top