BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021293
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]     82   6e-14
ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|...    79   4e-13
emb|CBI22267.3| unnamed protein product [Vitis vinifera]               78   6e-13
gb|AFK48969.1| unknown [Lotus japonicus]                               77   1e-12
gb|AFK36120.1| unknown [Lotus japonicus]                               77   1e-12

>ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]
          Length = 171

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/59 (61%), Positives = 47/59 (79%)
 Frame = -2

Query: 179 LFMILTCTLVLIIPEVSATRYIVGGSNGWNSNGKVNYTDWAKEHKFYLDDWLFFVYDRN 3
           L ++L C +VL++P+VSATR+ VGG+ GW++N  VNYT WAK+  FY  DWLFFVYDRN
Sbjct: 8   LAVVLMCAVVLMLPDVSATRWTVGGNQGWSTN--VNYTVWAKDKHFYNGDWLFFVYDRN 64


>ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|87240662|gb|ABD32520.1|
           Blue (type 1) copper domain [Medicago truncatula]
           gi|355493609|gb|AES74812.1| Lamin-like protein [Medicago
           truncatula] gi|388499076|gb|AFK37604.1| unknown
           [Medicago truncatula]
          Length = 179

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/80 (50%), Positives = 55/80 (68%)
 Frame = -2

Query: 242 EERKKKIMVNLRITSMPTLTLLFMILTCTLVLIIPEVSATRYIVGGSNGWNSNGKVNYTD 63
           E RKK++  +   T  PT+  +F++L   +++++P VSATR++VGG  GWN+N   NYT 
Sbjct: 2   EGRKKRVFAS---TISPTM--VFLLLGFAVLVMLPMVSATRFMVGGRMGWNTN--FNYTT 54

Query: 62  WAKEHKFYLDDWLFFVYDRN 3
           WAK   FY  DWLFFVYDRN
Sbjct: 55  WAKGKHFYNGDWLFFVYDRN 74


>emb|CBI22267.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 34/53 (64%), Positives = 43/53 (81%)
 Frame = -2

Query: 161 CTLVLIIPEVSATRYIVGGSNGWNSNGKVNYTDWAKEHKFYLDDWLFFVYDRN 3
           C +VL++P+VSATR+ VGG+ GW++N  VNYT WAK+  FY  DWLFFVYDRN
Sbjct: 2   CAVVLMLPDVSATRWTVGGNQGWSTN--VNYTVWAKDKHFYNGDWLFFVYDRN 52


>gb|AFK48969.1| unknown [Lotus japonicus]
          Length = 176

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/79 (51%), Positives = 52/79 (65%)
 Frame = -2

Query: 239 ERKKKIMVNLRITSMPTLTLLFMILTCTLVLIIPEVSATRYIVGGSNGWNSNGKVNYTDW 60
           ER KK M+       P + LLF  L   ++L++PEVSA R++VG    WN N  VNYT W
Sbjct: 2   ERVKKKMLG-----SPAMVLLF--LGFAVLLMVPEVSAKRWLVGDGKFWNPN--VNYTVW 52

Query: 59  AKEHKFYLDDWLFFVYDRN 3
           A++  FY+DDWLFFVYDRN
Sbjct: 53  ARDKHFYIDDWLFFVYDRN 71


>gb|AFK36120.1| unknown [Lotus japonicus]
          Length = 176

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/79 (51%), Positives = 52/79 (65%)
 Frame = -2

Query: 239 ERKKKIMVNLRITSMPTLTLLFMILTCTLVLIIPEVSATRYIVGGSNGWNSNGKVNYTDW 60
           ER KK M+       P + LLF  L   ++L++PEVSA R++VG    WN N  VNYT W
Sbjct: 2   ERVKKKMLG-----SPAMVLLF--LGFAVLLMVPEVSAKRWLVGDGKFWNPN--VNYTVW 52

Query: 59  AKEHKFYLDDWLFFVYDRN 3
           A++  FY+DDWLFFVYDRN
Sbjct: 53  ARDKHFYIDDWLFFVYDRN 71