BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021287
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   197   2e-69
emb|CBI15329.3| unnamed protein product [Vitis vinifera]              196   9e-65
ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   196   9e-65
ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   192   1e-63
ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   190   8e-63

>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score =  197 bits (502), Expect(3) = 2e-69
 Identities = 90/113 (79%), Positives = 104/113 (92%)
 Frame = +2

Query: 602 TSASFTKDQRFILSSGKDSTVKLWEVRNGRLVKQYLGVTHTQLRCQAVFNKTEEFVLSIV 781
           TSA+FTKDQRF+LS GKDS++KLWEV +GRLVKQY+G THTQLRCQAVFN+TEEFV+SI 
Sbjct: 320 TSATFTKDQRFVLSCGKDSSIKLWEVGSGRLVKQYIGATHTQLRCQAVFNETEEFVISID 379

Query: 782 EPNNEIVIWGALTSEKVARFPSNHIGAPRWLEHSPTEATFISCGMDRSVRYWK 940
           EP+NEI+IW ALT+EKVAR+PSNH GAPRW+EHSP EA FISCG DRSVR+WK
Sbjct: 380 EPSNEIIIWDALTAEKVARWPSNHNGAPRWIEHSPVEAAFISCGTDRSVRFWK 432



 Score = 79.7 bits (195), Expect(3) = 2e-69
 Identities = 36/45 (80%), Positives = 39/45 (86%)
 Frame = +1

Query: 415 GTDHHIAHL*DINTLQCYLTANDPEIGVNGVINQVRYSSIGGMYV 549
           GTDH IAHL D+NT QCYL+AN PEIG+NG INQVRYSS GGMYV
Sbjct: 244 GTDHQIAHLYDVNTFQCYLSANVPEIGMNGAINQVRYSSTGGMYV 288



 Score = 33.9 bits (76), Expect(3) = 2e-69
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +3

Query: 549 IRVWDGVTAQCVHSIVG 599
           IR+WDGVTA C+ SIVG
Sbjct: 296 IRLWDGVTANCIRSIVG 312


>emb|CBI15329.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  196 bits (497), Expect(3) = 9e-65
 Identities = 91/113 (80%), Positives = 102/113 (90%)
 Frame = +2

Query: 602 TSASFTKDQRFILSSGKDSTVKLWEVRNGRLVKQYLGVTHTQLRCQAVFNKTEEFVLSIV 781
           TSASFTKDQRF+LS GKDS+VKLWE+ +G+LVKQYLG  HTQLRCQAVFN+TEEFVLSI 
Sbjct: 369 TSASFTKDQRFVLSCGKDSSVKLWEIGSGKLVKQYLGAAHTQLRCQAVFNETEEFVLSID 428

Query: 782 EPNNEIVIWGALTSEKVARFPSNHIGAPRWLEHSPTEATFISCGMDRSVRYWK 940
           E +NEIV+W ALT+E VAR PSNHIGAPRWLEHSPTEA F+SCG DRSVR+WK
Sbjct: 429 EQSNEIVVWDALTAEIVARLPSNHIGAPRWLEHSPTEAAFVSCGTDRSVRFWK 481



 Score = 65.9 bits (159), Expect(3) = 9e-65
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +1

Query: 415 GTDHHIAHL*DINTLQCYLTANDPEIGVNGVINQVRYSSIGGMYV 549
           GTDH +AHL D+NT QCYL+AN  ++G++  INQVRYSS G MYV
Sbjct: 293 GTDHPVAHLYDVNTFQCYLSANVQDLGISASINQVRYSSNGDMYV 337



 Score = 34.3 bits (77), Expect(3) = 9e-65
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +3

Query: 549 IRVWDGVTAQCVHSIVG 599
           IR+WDGVTA CV SIVG
Sbjct: 345 IRLWDGVTANCVRSIVG 361


>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
           vinifera]
          Length = 440

 Score =  196 bits (497), Expect(3) = 9e-65
 Identities = 91/113 (80%), Positives = 102/113 (90%)
 Frame = +2

Query: 602 TSASFTKDQRFILSSGKDSTVKLWEVRNGRLVKQYLGVTHTQLRCQAVFNKTEEFVLSIV 781
           TSASFTKDQRF+LS GKDS+VKLWE+ +G+LVKQYLG  HTQLRCQAVFN+TEEFVLSI 
Sbjct: 325 TSASFTKDQRFVLSCGKDSSVKLWEIGSGKLVKQYLGAAHTQLRCQAVFNETEEFVLSID 384

Query: 782 EPNNEIVIWGALTSEKVARFPSNHIGAPRWLEHSPTEATFISCGMDRSVRYWK 940
           E +NEIV+W ALT+E VAR PSNHIGAPRWLEHSPTEA F+SCG DRSVR+WK
Sbjct: 385 EQSNEIVVWDALTAEIVARLPSNHIGAPRWLEHSPTEAAFVSCGTDRSVRFWK 437



 Score = 65.9 bits (159), Expect(3) = 9e-65
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +1

Query: 415 GTDHHIAHL*DINTLQCYLTANDPEIGVNGVINQVRYSSIGGMYV 549
           GTDH +AHL D+NT QCYL+AN  ++G++  INQVRYSS G MYV
Sbjct: 249 GTDHPVAHLYDVNTFQCYLSANVQDLGISASINQVRYSSNGDMYV 293



 Score = 34.3 bits (77), Expect(3) = 9e-65
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +3

Query: 549 IRVWDGVTAQCVHSIVG 599
           IR+WDGVTA CV SIVG
Sbjct: 301 IRLWDGVTANCVRSIVG 317


>ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 435

 Score =  192 bits (489), Expect(3) = 1e-63
 Identities = 87/113 (76%), Positives = 102/113 (90%)
 Frame = +2

Query: 602 TSASFTKDQRFILSSGKDSTVKLWEVRNGRLVKQYLGVTHTQLRCQAVFNKTEEFVLSIV 781
           TSA FTKD+R++LS GKDS+VKLW+V  GRLVKQY+G TH QLRCQAVFN TEEFVLSI 
Sbjct: 320 TSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGATHIQLRCQAVFNDTEEFVLSID 379

Query: 782 EPNNEIVIWGALTSEKVARFPSNHIGAPRWLEHSPTEATFISCGMDRSVRYWK 940
           EP+NEIVIW ALT+E+VAR+PSNH+GAPRWLEHSPTE+ FISCG D+S+R+WK
Sbjct: 380 EPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFISCGTDKSIRFWK 432



 Score = 70.9 bits (172), Expect(3) = 1e-63
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = +1

Query: 415 GTDHHIAHL*DINTLQCYLTANDPEIGVNGVINQVRYSSIGGMYV 549
           GTDH I HL D+NT QC+L+AN PEIG NG INQ+RYS+ G MYV
Sbjct: 244 GTDHQIPHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYV 288



 Score = 28.5 bits (62), Expect(3) = 1e-63
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +3

Query: 549 IRVWDGVTAQCVHSIV 596
           +R+WDG+ A+C+ SIV
Sbjct: 296 VRLWDGIGAKCIRSIV 311


>ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 437

 Score =  190 bits (482), Expect(3) = 8e-63
 Identities = 86/113 (76%), Positives = 101/113 (89%)
 Frame = +2

Query: 602 TSASFTKDQRFILSSGKDSTVKLWEVRNGRLVKQYLGVTHTQLRCQAVFNKTEEFVLSIV 781
           TSA FTKD+R++LS  KDS+VKLW+V  GRLVKQY+G TH QLRCQAVFN TEEFVLSI 
Sbjct: 322 TSAKFTKDERYVLSCXKDSSVKLWDVGTGRLVKQYVGATHIQLRCQAVFNDTEEFVLSID 381

Query: 782 EPNNEIVIWGALTSEKVARFPSNHIGAPRWLEHSPTEATFISCGMDRSVRYWK 940
           EP+NEIVIW ALT+E+VAR+PSNH+GAPRWLEHSPTE+ FISCG D+S+R+WK
Sbjct: 382 EPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFISCGTDKSIRFWK 434



 Score = 70.9 bits (172), Expect(3) = 8e-63
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = +1

Query: 415 GTDHHIAHL*DINTLQCYLTANDPEIGVNGVINQVRYSSIGGMYV 549
           GTDH I HL D+NT QC+L+AN PEIG NG INQ+RYS+ G MYV
Sbjct: 246 GTDHQIPHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYV 290



 Score = 28.5 bits (62), Expect(3) = 8e-63
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +3

Query: 549 IRVWDGVTAQCVHSIV 596
           +R+WDG+ A+C+ SIV
Sbjct: 298 VRLWDGIGAKCIRSIV 313