BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021286
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   602   e-173
ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   568   e-164
emb|CBI15329.3| unnamed protein product [Vitis vinifera]              557   e-161
ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   555   e-159
ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   540   e-155

>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
            communis] gi|223546234|gb|EEF47736.1| Cleavage
            stimulation factor 50 kDa subunit, putative [Ricinus
            communis]
          Length = 435

 Score =  602 bits (1551), Expect(2) = e-173
 Identities = 284/344 (82%), Positives = 320/344 (93%)
 Frame = +1

Query: 1    LLELVAKGLAVERDEASRGLSPATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSK 180
            LLELVAKGLA E+DE  RG++   M D G ++PA YGS+P P+A +VDFS  QD KGSSK
Sbjct: 53   LLELVAKGLAAEKDEMLRGVTSTAMYDLGTLLPAAYGSIPAPRAASVDFSAAQDTKGSSK 112

Query: 181  TFSKHETRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPDTREGPIR 360
             FSKHETRH+SEHKN+ARCARFSPDGR+VATGSADTSIKLFE+SKIKQMML D R+GP+R
Sbjct: 113  NFSKHETRHLSEHKNIARCARFSPDGRFVATGSADTSIKLFEISKIKQMMLSDARDGPVR 172

Query: 361  PVIRTFYDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSV 540
            PVIRTFYDH+QP+NDLDFHPQ+ VLISGAKDHTIKFFDFSKA AKKAFRVIQDTHNVRSV
Sbjct: 173  PVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFSKATAKKAFRVIQDTHNVRSV 232

Query: 541  SFHPSGEYLLAGTDHHIAHLYDINTFQCYLTANDPEIGVNGAINQVRYSSTGGMYVTASK 720
            SFHPSG++LLAGTDH IAHLYD+NTFQCYL+AN PEIG+NGAINQVRYSSTGGMYVTASK
Sbjct: 233  SFHPSGDFLLAGTDHQIAHLYDVNTFQCYLSANVPEIGMNGAINQVRYSSTGGMYVTASK 292

Query: 721  DGAIRVWDGVTAQCVRAIVGAHGSAEATSASFTKDQRFILSSGKDSTVKLWEVGSGRLVK 900
            DGAIR+WDGVTA C+R+IVGAHG+AE+TSA+FTKDQRF+LS GKDS++KLWEVGSGRLVK
Sbjct: 293  DGAIRLWDGVTANCIRSIVGAHGTAESTSATFTKDQRFVLSCGKDSSIKLWEVGSGRLVK 352

Query: 901  QYLGATHTQLRCQAVFNETEEFVLSIDEPNNEIVIWDALTSEKV 1032
            QY+GATHTQLRCQAVFNETEEFV+SIDEP+NEI+IWDALT+EKV
Sbjct: 353  QYIGATHTQLRCQAVFNETEEFVISIDEPSNEIIIWDALTAEKV 396



 Score = 36.6 bits (83), Expect(2) = e-173
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3

Query: 1107 ATFISCGTDRSVRYWKE 1157
            A FISCGTDRSVR+WK+
Sbjct: 417  AAFISCGTDRSVRFWKD 433


>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
            vinifera]
          Length = 440

 Score =  568 bits (1463), Expect(2) = e-164
 Identities = 276/347 (79%), Positives = 312/347 (89%), Gaps = 3/347 (0%)
 Frame = +1

Query: 1    LLELVAKGLAVERDEASRGLSP-ATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSS 177
            L++LVAKGLAVE+DE  +G  P A  LDSG V+P  YGS+P P+  AVDF  V D KGSS
Sbjct: 55   LIDLVAKGLAVEKDEMLKGGVPSAAFLDSGAVMPVTYGSIPAPRTVAVDFGAVHDTKGSS 114

Query: 178  KTFSKHETRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPD--TREG 351
            K+F KHETRHVSEHKN+ARCARFS DGR+VATGSAD SIKLFE+SKIKQMMLPD  TR+G
Sbjct: 115  KSFPKHETRHVSEHKNLARCARFSLDGRFVATGSADMSIKLFEISKIKQMMLPDANTRDG 174

Query: 352  PIRPVIRTFYDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNV 531
            P+RPVIRTFYDH+QP+NDLDFHPQS VLISGAKDHTIKFFDFSK VAK+AFRVIQDTHNV
Sbjct: 175  PVRPVIRTFYDHIQPINDLDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDTHNV 234

Query: 532  RSVSFHPSGEYLLAGTDHHIAHLYDINTFQCYLTANDPEIGVNGAINQVRYSSTGGMYVT 711
            RSVSFHPSG++LLAGTDH +AHLYD+NTFQCYL+AN  ++G++ +INQVRYSS G MYVT
Sbjct: 235  RSVSFHPSGDFLLAGTDHPVAHLYDVNTFQCYLSANVQDLGISASINQVRYSSNGDMYVT 294

Query: 712  ASKDGAIRVWDGVTAQCVRAIVGAHGSAEATSASFTKDQRFILSSGKDSTVKLWEVGSGR 891
            ASKDGAIR+WDGVTA CVR+IVGAHG+AEATSASFTKDQRF+LS GKDS+VKLWE+GSG+
Sbjct: 295  ASKDGAIRLWDGVTANCVRSIVGAHGTAEATSASFTKDQRFVLSCGKDSSVKLWEIGSGK 354

Query: 892  LVKQYLGATHTQLRCQAVFNETEEFVLSIDEPNNEIVIWDALTSEKV 1032
            LVKQYLGA HTQLRCQAVFNETEEFVLSIDE +NEIV+WDALT+E V
Sbjct: 355  LVKQYLGAAHTQLRCQAVFNETEEFVLSIDEQSNEIVVWDALTAEIV 401



 Score = 40.0 bits (92), Expect(2) = e-164
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +3

Query: 1107 ATFISCGTDRSVRYWKEVL 1163
            A F+SCGTDRSVR+WKE+L
Sbjct: 422  AAFVSCGTDRSVRFWKEIL 440


>emb|CBI15329.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  557 bits (1436), Expect(2) = e-161
 Identities = 274/347 (78%), Positives = 310/347 (89%), Gaps = 3/347 (0%)
 Frame = +1

Query: 1    LLELVAKGLAVERDEASRGLSP-ATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSS 177
            L++LVAKGLAVE+DE  +G  P A  LDSG V+P  YGS+P P+ T  D   V D KGSS
Sbjct: 100  LIDLVAKGLAVEKDEMLKGGVPSAAFLDSGAVMPVTYGSIPAPR-TGYDRFAVHDTKGSS 158

Query: 178  KTFSKHETRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPD--TREG 351
            K+F KHETRHVSEHKN+ARCARFS DGR+VATGSAD SIKLFE+SKIKQMMLPD  TR+G
Sbjct: 159  KSFPKHETRHVSEHKNLARCARFSLDGRFVATGSADMSIKLFEISKIKQMMLPDANTRDG 218

Query: 352  PIRPVIRTFYDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNV 531
            P+RPVIRTFYDH+QP+NDLDFHPQS VLISGAKDHTIKFFDFSK VAK+AFRVIQDTHNV
Sbjct: 219  PVRPVIRTFYDHIQPINDLDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDTHNV 278

Query: 532  RSVSFHPSGEYLLAGTDHHIAHLYDINTFQCYLTANDPEIGVNGAINQVRYSSTGGMYVT 711
            RSVSFHPSG++LLAGTDH +AHLYD+NTFQCYL+AN  ++G++ +INQVRYSS G MYVT
Sbjct: 279  RSVSFHPSGDFLLAGTDHPVAHLYDVNTFQCYLSANVQDLGISASINQVRYSSNGDMYVT 338

Query: 712  ASKDGAIRVWDGVTAQCVRAIVGAHGSAEATSASFTKDQRFILSSGKDSTVKLWEVGSGR 891
            ASKDGAIR+WDGVTA CVR+IVGAHG+AEATSASFTKDQRF+LS GKDS+VKLWE+GSG+
Sbjct: 339  ASKDGAIRLWDGVTANCVRSIVGAHGTAEATSASFTKDQRFVLSCGKDSSVKLWEIGSGK 398

Query: 892  LVKQYLGATHTQLRCQAVFNETEEFVLSIDEPNNEIVIWDALTSEKV 1032
            LVKQYLGA HTQLRCQAVFNETEEFVLSIDE +NEIV+WDALT+E V
Sbjct: 399  LVKQYLGAAHTQLRCQAVFNETEEFVLSIDEQSNEIVVWDALTAEIV 445



 Score = 40.0 bits (92), Expect(2) = e-161
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +3

Query: 1107 ATFISCGTDRSVRYWKEVL 1163
            A F+SCGTDRSVR+WKE+L
Sbjct: 466  AAFVSCGTDRSVRFWKEIL 484


>ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
            1-like [Cucumis sativus]
          Length = 437

 Score =  555 bits (1429), Expect(2) = e-159
 Identities = 260/344 (75%), Positives = 305/344 (88%)
 Frame = +1

Query: 1    LLELVAKGLAVERDEASRGLSPATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSK 180
            L+ELVAKGLAVE+DE  RG   + + + G  +P  +GS  P + +A+DFS  QD KGSSK
Sbjct: 55   LMELVAKGLAVEKDETLRGSPASALYEFGSSMPTTFGSAQPSRPSAIDFSTTQDTKGSSK 114

Query: 181  TFSKHETRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPDTREGPIR 360
             F KHETRH+SEHKNVARCARFS DGR+VATGSAD SIKLFEV+KIKQMMLPD ++GP+R
Sbjct: 115  NFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVR 174

Query: 361  PVIRTFYDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSV 540
            PVIRTFYDH+QP+NDLDFHPQ+ VL+SGAKDHTIKFFDFSK  AKKAFRVIQDTHNVRS+
Sbjct: 175  PVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSI 234

Query: 541  SFHPSGEYLLAGTDHHIAHLYDINTFQCYLTANDPEIGVNGAINQVRYSSTGGMYVTASK 720
            S HPSG+YLLAGTDH I HLYD+NTFQC+L+AN PEIG NGAINQ+RYS+TG MYVTASK
Sbjct: 235  SLHPSGDYLLAGTDHQIPHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASK 294

Query: 721  DGAIRVWDGVTAQCVRAIVGAHGSAEATSASFTKDQRFILSSGKDSTVKLWEVGSGRLVK 900
            DGA+R+WDG+ A+C+R+IV AHG+AEATSA FTKD+R++LS  KDS+VKLW+VG+GRLVK
Sbjct: 295  DGAVRLWDGIGAKCIRSIVSAHGTAEATSAKFTKDERYVLSCXKDSSVKLWDVGTGRLVK 354

Query: 901  QYLGATHTQLRCQAVFNETEEFVLSIDEPNNEIVIWDALTSEKV 1032
            QY+GATH QLRCQAVFN+TEEFVLSIDEP+NEIVIWDALT+E+V
Sbjct: 355  QYVGATHIQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERV 398



 Score = 35.8 bits (81), Expect(2) = e-159
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +3

Query: 1107 ATFISCGTDRSVRYWKEVL 1163
            + FISCGTD+S+R+WKE L
Sbjct: 419  SAFISCGTDKSIRFWKESL 437


>ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
            1-like [Cucumis sativus]
          Length = 435

 Score =  540 bits (1390), Expect(2) = e-155
 Identities = 254/344 (73%), Positives = 301/344 (87%)
 Frame = +1

Query: 1    LLELVAKGLAVERDEASRGLSPATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSK 180
            L+ELVAKGLAVE+DE  RG   + + + G  +P  +GS  P + +A+DFS  QD KGSSK
Sbjct: 55   LMELVAKGLAVEKDETLRGSPASALYEFGSSMPTTFGSAQPSRPSAIDFSTTQDTKGSSK 114

Query: 181  TFSKHETRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPDTREGPIR 360
             F KHETRH+SEHKNVARCARFS DGR+VATGSAD SIKLFEV  +  + +PD ++GP+R
Sbjct: 115  NFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEV--LIXLTIPDAKDGPVR 172

Query: 361  PVIRTFYDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSV 540
            PVIRTFYDH+QP+NDLDFHPQ+ VL+SGAKDHTIKFFDFSK  AKKAFRVIQDTHNVRS+
Sbjct: 173  PVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSI 232

Query: 541  SFHPSGEYLLAGTDHHIAHLYDINTFQCYLTANDPEIGVNGAINQVRYSSTGGMYVTASK 720
            S HPSG+YLLAGTDH I HLYD+NTFQC+L+AN PEIG NGAINQ+RYS+TG MYVTASK
Sbjct: 233  SLHPSGDYLLAGTDHQIPHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASK 292

Query: 721  DGAIRVWDGVTAQCVRAIVGAHGSAEATSASFTKDQRFILSSGKDSTVKLWEVGSGRLVK 900
            DGA+R+WDG+ A+C+R+IV AHG+AEATSA FTKD+R++LS GKDS+VKLW+VG+GRLVK
Sbjct: 293  DGAVRLWDGIGAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVK 352

Query: 901  QYLGATHTQLRCQAVFNETEEFVLSIDEPNNEIVIWDALTSEKV 1032
            QY+GATH QLRCQAVFN+TEEFVLSIDEP+NEIVIWDALT+E+V
Sbjct: 353  QYVGATHIQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERV 396



 Score = 35.8 bits (81), Expect(2) = e-155
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +3

Query: 1107 ATFISCGTDRSVRYWKEVL 1163
            + FISCGTD+S+R+WKE L
Sbjct: 417  SAFISCGTDKSIRFWKESL 435