BLASTX nr result
ID: Coptis25_contig00021281
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00021281
(430 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFN84621.1| ferritin [Glycine max] 55 7e-09
gb|AFO70136.1| ferritin Fer14;1 [Glycine max] 55 1e-08
ref|XP_003518424.1| PREDICTED: ferritin-4, chloroplastic-like [G... 54 1e-08
ref|NP_001237049.1| ferritin-4, chloroplastic [Glycine max] gi|2... 54 1e-08
pdb|3A68|A Chain A, Crystal Structure Of Plant Ferritin Reveals ... 54 1e-08
>gb|AFN84621.1| ferritin [Glycine max]
Length = 250
Score = 54.7 bits (130), Expect(2) = 7e-09
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -3
Query: 332 FCGTEYLTEQVESIKRISEYVAQLRRVGKGDGQ 234
F TEYL EQVE+IKRISEYVAQLRRVGKG G+
Sbjct: 202 FVETEYLGEQVEAIKRISEYVAQLRRVGKGHGK 234
Score = 30.0 bits (66), Expect(2) = 7e-09
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = -1
Query: 430 AMGLAXXXXXXXXXXXXXLHQVATRNNVVQLADFVE 323
AM LA LH VAT+N VQLADFVE
Sbjct: 169 AMELALSLEKLTNEKLLNLHSVATKNGEVQLADFVE 204
>gb|AFO70136.1| ferritin Fer14;1 [Glycine max]
Length = 247
Score = 54.7 bits (130), Expect(2) = 1e-08
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -3
Query: 332 FCGTEYLTEQVESIKRISEYVAQLRRVGKGDG 237
F TEYL EQVE+IKRISEYVAQLRRVGKG G
Sbjct: 200 FVETEYLREQVEAIKRISEYVAQLRRVGKGHG 231
Score = 29.6 bits (65), Expect(2) = 1e-08
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = -1
Query: 430 AMGLAXXXXXXXXXXXXXLHQVATRNNVVQLADFVE 323
AM LA LH VAT+N VQLADFVE
Sbjct: 167 AMELALSLEKLTNEQLLNLHSVATKNGDVQLADFVE 202
>ref|XP_003518424.1| PREDICTED: ferritin-4, chloroplastic-like [Glycine max]
Length = 356
Score = 54.3 bits (129), Expect(2) = 1e-08
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -3
Query: 332 FCGTEYLTEQVESIKRISEYVAQLRRVGKGDG 237
F TEYL EQVE+IKRISEYVAQLRRVGKG G
Sbjct: 309 FVETEYLGEQVEAIKRISEYVAQLRRVGKGHG 340
Score = 29.6 bits (65), Expect(2) = 1e-08
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = -1
Query: 430 AMGLAXXXXXXXXXXXXXLHQVATRNNVVQLADFVE 323
AM LA LH VAT+N VQLADFVE
Sbjct: 276 AMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVE 311
>ref|NP_001237049.1| ferritin-4, chloroplastic [Glycine max]
gi|259016233|sp|Q948P5.2|FRI4_SOYBN RecName:
Full=Ferritin-4, chloroplastic; AltName: Full=SFerH-4;
Flags: Precursor gi|251733308|dbj|BAB64537.2| ferritin
[Glycine max] gi|255647970|gb|ACU24442.1| unknown
[Glycine max]
Length = 247
Score = 54.3 bits (129), Expect(2) = 1e-08
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -3
Query: 332 FCGTEYLTEQVESIKRISEYVAQLRRVGKGDG 237
F TEYL EQVE+IKRISEYVAQLRRVGKG G
Sbjct: 200 FVETEYLGEQVEAIKRISEYVAQLRRVGKGHG 231
Score = 29.6 bits (65), Expect(2) = 1e-08
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = -1
Query: 430 AMGLAXXXXXXXXXXXXXLHQVATRNNVVQLADFVE 323
AM LA LH VAT+N VQLADFVE
Sbjct: 167 AMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVE 202
>pdb|3A68|A Chain A, Crystal Structure Of Plant Ferritin Reveals A Novel Metal
Binding Site That Functions As A Transit Site For Metal
Transfer In Ferritin gi|270346418|pdb|3A68|B Chain B,
Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346419|pdb|3A68|C Chain
C, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346420|pdb|3A68|D Chain
D, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346421|pdb|3A68|E Chain
E, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346422|pdb|3A68|F Chain
F, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346423|pdb|3A68|G Chain
G, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346424|pdb|3A68|H Chain
H, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346425|pdb|3A68|I Chain
I, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346426|pdb|3A68|J Chain
J, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346427|pdb|3A68|K Chain
K, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346428|pdb|3A68|L Chain
L, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346429|pdb|3A68|M Chain
M, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346430|pdb|3A68|N Chain
N, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346431|pdb|3A68|O Chain
O, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346432|pdb|3A68|P Chain
P, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346433|pdb|3A68|Q Chain
Q, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346434|pdb|3A68|R Chain
R, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346435|pdb|3A68|S Chain
S, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346436|pdb|3A68|T Chain
T, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346437|pdb|3A68|U Chain
U, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346438|pdb|3A68|V Chain
V, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346439|pdb|3A68|W Chain
W, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346440|pdb|3A68|X Chain
X, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin
Length = 212
Score = 54.3 bits (129), Expect(2) = 1e-08
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -3
Query: 332 FCGTEYLTEQVESIKRISEYVAQLRRVGKGDG 237
F TEYL EQVE+IKRISEYVAQLRRVGKG G
Sbjct: 165 FVETEYLGEQVEAIKRISEYVAQLRRVGKGHG 196
Score = 29.6 bits (65), Expect(2) = 1e-08
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = -1
Query: 430 AMGLAXXXXXXXXXXXXXLHQVATRNNVVQLADFVE 323
AM LA LH VAT+N VQLADFVE
Sbjct: 132 AMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVE 167