BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021279
         (1366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|2...   239   1e-60
ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|2...   238   3e-60
ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-59
ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vit...   233   9e-59
ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vit...   227   5e-57

>ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|222853349|gb|EEE90896.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  239 bits (610), Expect = 1e-60
 Identities = 130/275 (47%), Positives = 168/275 (61%), Gaps = 17/275 (6%)
 Frame = +3

Query: 93  MASANKLH----LKNPTSSDTEDKKTSPNMNIESIALPPP-------PFTLDELQEDLIL 239
           M +ANK H     K P +  +  K T+P  N    + P         P  L    +D +L
Sbjct: 1   MTAANKNHHPSSSKPPKNHHSTPKATTPQTNTTQNSNPTTNPNPAANPSPLSPSLKDQVL 60

Query: 240 SKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWNYGKSPFKXXXXXX 419
           S++ ++TRQE+++RR  +LK   K ++DYYWALME+ +V +REYYW YG SPFK      
Sbjct: 61  SRATHITRQELLKRRSHKLKQLSKCFKDYYWALMEELKVLYREYYWKYGVSPFKEDHHNT 120

Query: 420 XXXXXXXXXXXXXXXXXXXKLGLG------LNENCSSGGSGIVKNRKCAFSGCKSKAMAL 581
                                G G      + EN ++  S +  N +C F GCK KAMAL
Sbjct: 121 LQKVEQHKQGGGFGVLEREN-GEGEANIEVIGEN-NNNFSDLKSNHRCLFVGCKLKAMAL 178

Query: 582 TNYCHLHILLDTKQKLYKACNYIVKSQHTGPVHCGKPILRSTEPSLCSVHFEKAQKHVTR 761
           T++CHLHIL D KQKLYK C Y++KS   GP+ CGKPILRST P+LC+VHF+KAQKHVT+
Sbjct: 179 TSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSTAPALCTVHFQKAQKHVTQ 238

Query: 762 ALKKAGLNISSASKLAPKFHVIVAESVRHINMKRR 866
           AL+KAGLN+SS+SKLAPKFHVIV E VR I  KR+
Sbjct: 239 ALRKAGLNVSSSSKLAPKFHVIVTEYVRQIQAKRK 273


>ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|222837262|gb|EEE75641.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  238 bits (607), Expect = 3e-60
 Identities = 132/295 (44%), Positives = 172/295 (58%), Gaps = 20/295 (6%)
 Frame = +3

Query: 93  MASANKLHL-------KNPTSSDTEDKKTSPNMNIESIALPPP-PFTLDELQEDLILSKS 248
           M +A K HL       KN  S+      T+P  NI     P   P  L    +D +LS++
Sbjct: 1   MTAATKKHLPSSSKPPKNHHSNPNTTTTTTPQPNITQNPNPTTNPSPLSPTLKDQVLSRA 60

Query: 249 EYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWNYGKSPFKXXXXXXXXX 428
            ++TRQE+++RR  +LK   K ++D+YWALME+ ++++REYYW YG SPFK         
Sbjct: 61  THITRQELLKRRSYKLKQLSKCFKDHYWALMEELKIQYREYYWEYGVSPFKEDQNTLQKQ 120

Query: 429 XXXXXXXXXXXXXXXXKLGLGLNENCSSGG------------SGIVKNRKCAFSGCKSKA 572
                            +G+   EN  SG             S +  N +C F GCK KA
Sbjct: 121 EQQKQGGG---------IGVLERENEESGANIEVIGENNTNVSDLKSNHRCLFVGCKLKA 171

Query: 573 MALTNYCHLHILLDTKQKLYKACNYIVKSQHTGPVHCGKPILRSTEPSLCSVHFEKAQKH 752
           MALT++CHLHIL D KQKLYK C Y++KS   GP+ CGKPILRST PSLC++H +KAQKH
Sbjct: 172 MALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSTAPSLCTIHVQKAQKH 231

Query: 753 VTRALKKAGLNISSASKLAPKFHVIVAESVRHINMKRREKGGTTVSTAVVKEENA 917
           VT+AL+KAGLN+SS+SKLAPKFHVIV E VR I  +R+       S  + KE  A
Sbjct: 232 VTQALRKAGLNVSSSSKLAPKFHVIVTEYVRQIQFRRKAAERGNRSKVMDKEVTA 286


>ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|222870384|gb|EEF07515.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  236 bits (601), Expect = 1e-59
 Identities = 122/250 (48%), Positives = 162/250 (64%), Gaps = 1/250 (0%)
 Frame = +3

Query: 120 KNPTSSDTEDKKTSPNMNIESIALPPP-PFTLDELQEDLILSKSEYLTRQEVIRRRYRRL 296
           KN  S+      T+P  NI     P   P  L    +D +LS++ ++TRQE+++RR  +L
Sbjct: 4   KNHHSTPNTTTTTTPQPNITQNPNPTTNPSPLSPTLKDQVLSRATHITRQELLKRRSYKL 63

Query: 297 KLEIKVYEDYYWALMEDYRVKHREYYWNYGKSPFKXXXXXXXXXXXXXXXXXXXXXXXXX 476
           K   K ++D+YWALME+ ++++REYYW YG SPFK                         
Sbjct: 64  KQLSKCFKDHYWALMEELKIQYREYYWEYGVSPFKEDHQNTLQKQEQQ------------ 111

Query: 477 KLGLGLNENCSSGGSGIVKNRKCAFSGCKSKAMALTNYCHLHILLDTKQKLYKACNYIVK 656
           K G+ + EN ++  S +  N +C F GCK KAMALT++CHLHIL D KQKLYK C Y++K
Sbjct: 112 KQGV-IGEN-NTNVSDLKSNHRCLFVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIK 169

Query: 657 SQHTGPVHCGKPILRSTEPSLCSVHFEKAQKHVTRALKKAGLNISSASKLAPKFHVIVAE 836
           S   GP+ CGKPILRST PSLC++H +KAQKHVT+AL+KAGLN+SS+SKLAPKFHVIV E
Sbjct: 170 SAQAGPITCGKPILRSTAPSLCTIHVQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTE 229

Query: 837 SVRHINMKRR 866
            VR I  +R+
Sbjct: 230 YVRQIQFRRK 239


>ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 237

 Score =  233 bits (594), Expect = 9e-59
 Identities = 120/228 (52%), Positives = 151/228 (66%)
 Frame = +3

Query: 228 DLILSKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWNYGKSPFKXX 407
           D +LS S YLTRQEVIRRR RR+K   K Y  +YW+LM++ ++++REYYW YG+S F+  
Sbjct: 16  DAVLSSSRYLTRQEVIRRRSRRVKQLAKCYRAHYWSLMQELKIRYREYYWKYGRSAFQED 75

Query: 408 XXXXXXXXXXXXXXXXXXXXXXXKLGLGLNENCSSGGSGIVKNRKCAFSGCKSKAMALTN 587
                                   LGLG+ EN    G  +   ++CA SGCKSKAMALT 
Sbjct: 76  EKREGEGVEGTGENLNGHGKLG--LGLGIGEN----GFDV---KRCAVSGCKSKAMALTR 126

Query: 588 YCHLHILLDTKQKLYKACNYIVKSQHTGPVHCGKPILRSTEPSLCSVHFEKAQKHVTRAL 767
           +CH HIL D+KQKLYK C++++KS   GPV CGKPILRST PSLC +HF+KA++ V  AL
Sbjct: 127 FCHPHILSDSKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSLCPIHFQKAERQVNNAL 186

Query: 768 KKAGLNISSASKLAPKFHVIVAESVRHINMKRREKGGTTVSTAVVKEE 911
           KKAGLN +S+SKLAPKFHVIVAE V  I  KRR     +V+   +KEE
Sbjct: 187 KKAGLNAASSSKLAPKFHVIVAEYVHQIQTKRRAAQRASVNKVEIKEE 234


>ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 248

 Score =  227 bits (579), Expect = 5e-57
 Identities = 117/228 (51%), Positives = 148/228 (64%)
 Frame = +3

Query: 228 DLILSKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWNYGKSPFKXX 407
           D +LS S YLTRQEVIRRR RR+K   K Y  +YW+LM++ ++++REYYW YG+S F+  
Sbjct: 16  DAVLSSSRYLTRQEVIRRRSRRVKQLSKCYRAHYWSLMQELKIRYREYYWKYGRSAFQED 75

Query: 408 XXXXXXXXXXXXXXXXXXXXXXXKLGLGLNENCSSGGSGIVKNRKCAFSGCKSKAMALTN 587
                                   LGLG+ EN    G  +   ++CA SGCKSKAMALT 
Sbjct: 76  EKREGEGVEGTGENLNGHGKLG--LGLGIGEN----GFDV---KRCAVSGCKSKAMALTR 126

Query: 588 YCHLHILLDTKQKLYKACNYIVKSQHTGPVHCGKPILRSTEPSLCSVHFEKAQKHVTRAL 767
           +CH HIL D+KQKLYK C++++KS   GPV CGKPILRST PSLC +HF+KA++ V  AL
Sbjct: 127 FCHPHILSDSKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSLCPIHFQKAERQVNNAL 186

Query: 768 KKAGLNISSASKLAPKFHVIVAESVRHINMKRREKGGTTVSTAVVKEE 911
           KKAGLN +S+SKLAPKFHVIVAE V  I  KRR     +    ++  E
Sbjct: 187 KKAGLNAASSSKLAPKFHVIVAEYVHQIQTKRRAAQRASADAMILSYE 234