BLASTX nr result

ID: Coptis25_contig00021276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021276
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release ...   405   e-111
ref|XP_003548305.1| PREDICTED: eukaryotic peptide chain release ...   404   e-110
ref|XP_002297898.1| predicted protein [Populus trichocarpa] gi|2...   404   e-110
ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release ...   403   e-110
ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release ...   403   e-110

>ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
           [Glycine max]
          Length = 437

 Score =  405 bits (1040), Expect = e-111
 Identities = 204/230 (88%), Positives = 210/230 (91%)
 Frame = -2

Query: 692 MSDAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 513
           M D HETDKN               ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1   MVDGHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 512 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFDPFRPIN 333
           IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+TDDGKEKKVTIDF+PFRPIN
Sbjct: 61  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 120

Query: 332 VSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 153
            SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
Sbjct: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 152 RGGQSALRFARLRMEKRHNYVRKTAELSTQFYINATTSRPNVSGLILAGS 3
           RGGQSALRFARLRMEKRHNYVRKTAEL+TQFYIN  TS+PNVSGLILAGS
Sbjct: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGS 230


>ref|XP_003548305.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
           [Glycine max]
          Length = 437

 Score =  404 bits (1038), Expect = e-110
 Identities = 204/230 (88%), Positives = 211/230 (91%)
 Frame = -2

Query: 692 MSDAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 513
           M+DAH TDKN               ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1   MADAHGTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 512 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFDPFRPIN 333
           IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+TDDGKEKKVTIDF+PFRPIN
Sbjct: 61  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 120

Query: 332 VSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 153
            SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
Sbjct: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 152 RGGQSALRFARLRMEKRHNYVRKTAELSTQFYINATTSRPNVSGLILAGS 3
           RGGQSALRFARLRMEKRHNYVRKTAE +TQFYINA TS+PNVSGLILAGS
Sbjct: 181 RGGQSALRFARLRMEKRHNYVRKTAEHATQFYINAATSQPNVSGLILAGS 230


>ref|XP_002297898.1| predicted protein [Populus trichocarpa] gi|222845156|gb|EEE82703.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  404 bits (1038), Expect = e-110
 Identities = 202/230 (87%), Positives = 211/230 (91%)
 Frame = -2

Query: 692 MSDAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 513
           MSD HETDKN               ARGNGTSMISLIMPPRDQ++RVTKMLGDEFGTASN
Sbjct: 1   MSDGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASN 60

Query: 512 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFDPFRPIN 333
           IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+T+DGKEKKVTIDF+PFRPIN
Sbjct: 61  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 332 VSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 153
            SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKF+VDLPKKHG
Sbjct: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 152 RGGQSALRFARLRMEKRHNYVRKTAELSTQFYINATTSRPNVSGLILAGS 3
           RGGQSALRFARLRMEKRHNYVRKTAEL+TQFYIN  TS+PNVSGLILAGS
Sbjct: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGS 230


>ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
           [Cucumis sativus]
          Length = 436

 Score =  403 bits (1036), Expect = e-110
 Identities = 202/230 (87%), Positives = 212/230 (92%)
 Frame = -2

Query: 692 MSDAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 513
           M+DAHETDKN               ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1   MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 512 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFDPFRPIN 333
           IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+T+DGKEKKVTIDF+PFRPIN
Sbjct: 61  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 332 VSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 153
            SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
Sbjct: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 152 RGGQSALRFARLRMEKRHNYVRKTAELSTQFYINATTSRPNVSGLILAGS 3
           RGGQSALRFARLRMEKRHNYVRKTAEL+TQF+IN  TS+PNV+GLILAGS
Sbjct: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGS 230


>ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
           [Cucumis sativus] gi|449487371|ref|XP_004157593.1|
           PREDICTED: eukaryotic peptide chain release factor
           subunit 1-3-like [Cucumis sativus]
          Length = 436

 Score =  403 bits (1036), Expect = e-110
 Identities = 202/230 (87%), Positives = 212/230 (92%)
 Frame = -2

Query: 692 MSDAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 513
           M+DAHETDKN               ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1   MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 512 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFDPFRPIN 333
           IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+T+DGKEKKVTIDF+PFRPIN
Sbjct: 61  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 332 VSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 153
            SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
Sbjct: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 152 RGGQSALRFARLRMEKRHNYVRKTAELSTQFYINATTSRPNVSGLILAGS 3
           RGGQSALRFARLRMEKRHNYVRKTAEL+TQF+IN  TS+PNV+GLILAGS
Sbjct: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGS 230


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