BLASTX nr result
ID: Coptis25_contig00021276
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021276 (822 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release ... 405 e-111 ref|XP_003548305.1| PREDICTED: eukaryotic peptide chain release ... 404 e-110 ref|XP_002297898.1| predicted protein [Populus trichocarpa] gi|2... 404 e-110 ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release ... 403 e-110 ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release ... 403 e-110 >ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Glycine max] Length = 437 Score = 405 bits (1040), Expect = e-111 Identities = 204/230 (88%), Positives = 210/230 (91%) Frame = -2 Query: 692 MSDAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 513 M D HETDKN ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN Sbjct: 1 MVDGHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60 Query: 512 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFDPFRPIN 333 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+TDDGKEKKVTIDF+PFRPIN Sbjct: 61 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 120 Query: 332 VSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 153 SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFSVDLPKKHG Sbjct: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180 Query: 152 RGGQSALRFARLRMEKRHNYVRKTAELSTQFYINATTSRPNVSGLILAGS 3 RGGQSALRFARLRMEKRHNYVRKTAEL+TQFYIN TS+PNVSGLILAGS Sbjct: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGS 230 >ref|XP_003548305.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Glycine max] Length = 437 Score = 404 bits (1038), Expect = e-110 Identities = 204/230 (88%), Positives = 211/230 (91%) Frame = -2 Query: 692 MSDAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 513 M+DAH TDKN ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN Sbjct: 1 MADAHGTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60 Query: 512 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFDPFRPIN 333 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+TDDGKEKKVTIDF+PFRPIN Sbjct: 61 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 120 Query: 332 VSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 153 SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFSVDLPKKHG Sbjct: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180 Query: 152 RGGQSALRFARLRMEKRHNYVRKTAELSTQFYINATTSRPNVSGLILAGS 3 RGGQSALRFARLRMEKRHNYVRKTAE +TQFYINA TS+PNVSGLILAGS Sbjct: 181 RGGQSALRFARLRMEKRHNYVRKTAEHATQFYINAATSQPNVSGLILAGS 230 >ref|XP_002297898.1| predicted protein [Populus trichocarpa] gi|222845156|gb|EEE82703.1| predicted protein [Populus trichocarpa] Length = 436 Score = 404 bits (1038), Expect = e-110 Identities = 202/230 (87%), Positives = 211/230 (91%) Frame = -2 Query: 692 MSDAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 513 MSD HETDKN ARGNGTSMISLIMPPRDQ++RVTKMLGDEFGTASN Sbjct: 1 MSDGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASN 60 Query: 512 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFDPFRPIN 333 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+T+DGKEKKVTIDF+PFRPIN Sbjct: 61 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120 Query: 332 VSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 153 SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKF+VDLPKKHG Sbjct: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180 Query: 152 RGGQSALRFARLRMEKRHNYVRKTAELSTQFYINATTSRPNVSGLILAGS 3 RGGQSALRFARLRMEKRHNYVRKTAEL+TQFYIN TS+PNVSGLILAGS Sbjct: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGS 230 >ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Cucumis sativus] Length = 436 Score = 403 bits (1036), Expect = e-110 Identities = 202/230 (87%), Positives = 212/230 (92%) Frame = -2 Query: 692 MSDAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 513 M+DAHETDKN ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN Sbjct: 1 MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60 Query: 512 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFDPFRPIN 333 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+T+DGKEKKVTIDF+PFRPIN Sbjct: 61 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120 Query: 332 VSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 153 SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFSVDLPKKHG Sbjct: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180 Query: 152 RGGQSALRFARLRMEKRHNYVRKTAELSTQFYINATTSRPNVSGLILAGS 3 RGGQSALRFARLRMEKRHNYVRKTAEL+TQF+IN TS+PNV+GLILAGS Sbjct: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGS 230 >ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Cucumis sativus] gi|449487371|ref|XP_004157593.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Cucumis sativus] Length = 436 Score = 403 bits (1036), Expect = e-110 Identities = 202/230 (87%), Positives = 212/230 (92%) Frame = -2 Query: 692 MSDAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 513 M+DAHETDKN ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN Sbjct: 1 MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60 Query: 512 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFDPFRPIN 333 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+T+DGKEKKVTIDF+PFRPIN Sbjct: 61 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120 Query: 332 VSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 153 SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFSVDLPKKHG Sbjct: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180 Query: 152 RGGQSALRFARLRMEKRHNYVRKTAELSTQFYINATTSRPNVSGLILAGS 3 RGGQSALRFARLRMEKRHNYVRKTAEL+TQF+IN TS+PNV+GLILAGS Sbjct: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGS 230