BLASTX nr result

ID: Coptis25_contig00021269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021269
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinu...   134   9e-30
emb|CBI27342.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253...   126   2e-27
emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]   126   2e-27
ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227...   123   2e-26

>ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
            gi|223534074|gb|EEF35792.1| Ran GTPase binding protein,
            putative [Ricinus communis]
          Length = 1086

 Score =  134 bits (337), Expect = 9e-30
 Identities = 76/179 (42%), Positives = 105/179 (58%), Gaps = 1/179 (0%)
 Frame = -2

Query: 535  LTIRLYALAEKHSSLKEANGTTKPAEELDLYLPEITPI-STCTALDDVNPTLSSARLSPE 359
            LT RL A++EK S+ ++  G       ++L + + TP      +L     TL+S  L PE
Sbjct: 905  LTSRLRAMSEKISAGRKTKGG------VELSVSQNTPAYKDIISLVSPRATLASVHLPPE 958

Query: 358  AAEPDHRQLNDSCTLPIPFDGPISHTYARDLHNGGARMSDKSPVAEADFEQNVAKTLKSE 179
               P  RQL+   + PI F   +    +R L +   R+ + S    AD +QN  K  + E
Sbjct: 959  VNLPKDRQLDSLSSSPIVFSNTLKSMDSRGLCHEIGRLENDSQTPRADSKQNGTKGSRLE 1018

Query: 178  WAEQDEPGVYLTFMTLPNGGRGLKRVRFSRKRFSEKEAERWWQENHLRIHEKYEIEGII 2
            W EQ EPGVY+TF  LP G +GLKRVRFSRKRF+EKEAERWW+EN + +++KY IEG +
Sbjct: 1019 WVEQYEPGVYITFTVLPGGEKGLKRVRFSRKRFAEKEAERWWEENQVTVYQKYGIEGYV 1077


>emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score =  126 bits (317), Expect = 2e-27
 Identities = 73/178 (41%), Positives = 98/178 (55%)
 Frame = -2

Query: 535  LTIRLYALAEKHSSLKEANGTTKPAEELDLYLPEITPISTCTALDDVNPTLSSARLSPEA 356
            L+ RL+ ++EK SS ++A       + +D  LP+I                    ++   
Sbjct: 750  LSSRLHTMSEKLSSERDAK------DGIDSKLPQI--------------------ITRYV 783

Query: 355  AEPDHRQLNDSCTLPIPFDGPISHTYARDLHNGGARMSDKSPVAEADFEQNVAKTLKSEW 176
              P  RQL+  C  PI F   +   Y RD   G  R  + S + + D  QN  K  K EW
Sbjct: 784  DTPKERQLDSLCGSPIVFSNSLRSMYGRDECQGHTRSVEDSCLEKIDPRQNGTKPSKLEW 843

Query: 175  AEQDEPGVYLTFMTLPNGGRGLKRVRFSRKRFSEKEAERWWQENHLRIHEKYEIEGII 2
             EQ EPGVY+TF+TL +G RGLKRVRFSRKRF+EKEAERWW+EN + +++ Y IEG I
Sbjct: 844  VEQYEPGVYITFITLASGQRGLKRVRFSRKRFTEKEAERWWEENQIGVYQNYGIEGYI 901


>ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score =  126 bits (317), Expect = 2e-27
 Identities = 73/178 (41%), Positives = 98/178 (55%)
 Frame = -2

Query: 535  LTIRLYALAEKHSSLKEANGTTKPAEELDLYLPEITPISTCTALDDVNPTLSSARLSPEA 356
            L+ RL+ ++EK SS ++A       + +D  LP+I                    ++   
Sbjct: 863  LSSRLHTMSEKLSSERDAK------DGIDSKLPQI--------------------ITRYV 896

Query: 355  AEPDHRQLNDSCTLPIPFDGPISHTYARDLHNGGARMSDKSPVAEADFEQNVAKTLKSEW 176
              P  RQL+  C  PI F   +   Y RD   G  R  + S + + D  QN  K  K EW
Sbjct: 897  DTPKERQLDSLCGSPIVFSNSLRSMYGRDECQGHTRSVEDSCLEKIDPRQNGTKPSKLEW 956

Query: 175  AEQDEPGVYLTFMTLPNGGRGLKRVRFSRKRFSEKEAERWWQENHLRIHEKYEIEGII 2
             EQ EPGVY+TF+TL +G RGLKRVRFSRKRF+EKEAERWW+EN + +++ Y IEG I
Sbjct: 957  VEQYEPGVYITFITLASGQRGLKRVRFSRKRFTEKEAERWWEENQIGVYQNYGIEGYI 1014


>emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  126 bits (317), Expect = 2e-27
 Identities = 73/178 (41%), Positives = 98/178 (55%)
 Frame = -2

Query: 535  LTIRLYALAEKHSSLKEANGTTKPAEELDLYLPEITPISTCTALDDVNPTLSSARLSPEA 356
            L+ RL+ ++EK SS ++A       + +D  LP+I                    ++   
Sbjct: 922  LSSRLHTMSEKLSSERDAK------DGIDSKLPQI--------------------ITRYV 955

Query: 355  AEPDHRQLNDSCTLPIPFDGPISHTYARDLHNGGARMSDKSPVAEADFEQNVAKTLKSEW 176
              P  RQL+  C  PI F   +   Y RD   G  R  + S + + D  QN  K  K EW
Sbjct: 956  DTPKERQLDSLCGSPIVFSNSLRSMYGRDECQGHTRSVEDSCLEKIDPRQNGTKPSKLEW 1015

Query: 175  AEQDEPGVYLTFMTLPNGGRGLKRVRFSRKRFSEKEAERWWQENHLRIHEKYEIEGII 2
             EQ EPGVY+TF+TL +G RGLKRVRFSRKRF+EKEAERWW+EN + +++ Y IEG I
Sbjct: 1016 VEQYEPGVYITFITLASGQRGLKRVRFSRKRFTEKEAERWWEENQIGVYQNYGIEGYI 1073


>ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  123 bits (308), Expect = 2e-26
 Identities = 73/179 (40%), Positives = 101/179 (56%), Gaps = 3/179 (1%)
 Frame = -2

Query: 535  LTIRLYALAEKHSSLKEANGTTKPAEELDLYLPEITPI-STCTALDDVNPTLSSARLSPE 359
            L +RL+ ++EK SS     G TK  +E+D   P +TP+ S  +     +   +   L PE
Sbjct: 894  LALRLHTISEKVSS----RGDTK--DEVDANKPHVTPVYSDSSNFGHFHSPSAVTCLPPE 947

Query: 358  AAEPDHRQLNDSC-TLPIPFDGPISHTYARDLHNGGARMSDKSPVAEADFEQNV-AKTLK 185
               P  R + DS    PI F       Y R      ++ +D  P+A     +N  A  LK
Sbjct: 948  LQLPKDRVIGDSLYNSPIVFSNTFKSLYGRPAFRHVSKSTDPDPIANRTSAKNGNANYLK 1007

Query: 184  SEWAEQDEPGVYLTFMTLPNGGRGLKRVRFSRKRFSEKEAERWWQENHLRIHEKYEIEG 8
             EW EQ E GVY+TF +LP G +GLKRVRFSR+RFSE+EAERWW+EN + +++KY I+G
Sbjct: 1008 DEWMEQYEAGVYITFTSLPGGHKGLKRVRFSRRRFSEREAERWWEENQVIVYQKYGIDG 1066


Top