BLASTX nr result

ID: Coptis25_contig00021267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021267
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539686.1| PREDICTED: uncharacterized protein LOC100819...   172   3e-41
ref|XP_003531831.1| PREDICTED: curved DNA-binding protein-like [...   171   4e-41
ref|XP_002327350.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
ref|XP_002272533.1| PREDICTED: uncharacterized protein LOC100252...   165   3e-39
gb|AFK34686.1| unknown [Medicago truncatula]                          162   4e-38

>ref|XP_003539686.1| PREDICTED: uncharacterized protein LOC100819309 [Glycine max]
          Length = 252

 Score =  172 bits (435), Expect = 3e-41
 Identities = 85/140 (60%), Positives = 103/140 (73%)
 Frame = -2

Query: 520 AYRRLSKEYHPDTTTLPLKAASEKFMKLREVYDILSNDESRRFYDWTLAQEAASIRAEKM 341
           AYR+LSKEYHPDTT+LPLK ASEKFMKLREVY++LSN+ESR+FYDWTLAQE AS  AEKM
Sbjct: 127 AYRKLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSNEESRKFYDWTLAQEVASRHAEKM 186

Query: 340 KVKFDDPYEQELKNFESIPDTVDRLRXXXXXXXXXXXXXXXXXXXXXXXXXSQAALTVDA 161
           K+K +DP EQ+LKN+E +PD VDRL                          + +A+T+D 
Sbjct: 187 KMKLEDPREQQLKNWEPVPDMVDRL----------------GGRNMKLSDQAVSAITIDL 230

Query: 160 VILVFSICCIVYVIFFKEPY 101
            I+VF+ICCI+YVIFFKEPY
Sbjct: 231 FIIVFAICCIIYVIFFKEPY 250


>ref|XP_003531831.1| PREDICTED: curved DNA-binding protein-like [Glycine max]
          Length = 246

 Score =  171 bits (434), Expect = 4e-41
 Identities = 84/140 (60%), Positives = 104/140 (74%)
 Frame = -2

Query: 520 AYRRLSKEYHPDTTTLPLKAASEKFMKLREVYDILSNDESRRFYDWTLAQEAASIRAEKM 341
           AYR+LSKEYHPDTT+LPLK ASEKFMKLREVY++LSN+ESR+FYDWTLAQEAAS  AEKM
Sbjct: 121 AYRKLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSNEESRKFYDWTLAQEAASRHAEKM 180

Query: 340 KVKFDDPYEQELKNFESIPDTVDRLRXXXXXXXXXXXXXXXXXXXXXXXXXSQAALTVDA 161
           K+K +DP +Q+LKN+E +PD VDRL                          + +A+T+D 
Sbjct: 181 KMKLEDPRQQQLKNWEPVPDMVDRL----------------GGRNMKLSDQAVSAITIDL 224

Query: 160 VILVFSICCIVYVIFFKEPY 101
            I+VF++CCI+YVIFFKEPY
Sbjct: 225 FIIVFALCCIIYVIFFKEPY 244


>ref|XP_002327350.1| predicted protein [Populus trichocarpa] gi|222835720|gb|EEE74155.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  167 bits (423), Expect = 8e-40
 Identities = 82/140 (58%), Positives = 103/140 (73%)
 Frame = -2

Query: 520 AYRRLSKEYHPDTTTLPLKAASEKFMKLREVYDILSNDESRRFYDWTLAQEAASIRAEKM 341
           AYRRLSKEYHPDTT+LPLK+ASEKFM+LREVYDILSNDE R+FYDWTLAQEAAS +AE+M
Sbjct: 133 AYRRLSKEYHPDTTSLPLKSASEKFMRLREVYDILSNDEKRKFYDWTLAQEAASRQAEQM 192

Query: 340 KVKFDDPYEQELKNFESIPDTVDRLRXXXXXXXXXXXXXXXXXXXXXXXXXSQAALTVDA 161
           +++ +DPYEQE+  +ES+PD VDRL                          + +ALT D 
Sbjct: 193 RMRLEDPYEQEINRYESVPDMVDRL----------------GGRNMGLSDQAMSALTFDI 236

Query: 160 VILVFSICCIVYVIFFKEPY 101
            I++FSI C+++V+FFKEPY
Sbjct: 237 FIILFSIGCLIFVLFFKEPY 256


>ref|XP_002272533.1| PREDICTED: uncharacterized protein LOC100252905 [Vitis vinifera]
           gi|147803306|emb|CAN75474.1| hypothetical protein
           VITISV_002798 [Vitis vinifera]
           gi|296081011|emb|CBI18515.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/139 (58%), Positives = 103/139 (74%)
 Frame = -2

Query: 520 AYRRLSKEYHPDTTTLPLKAASEKFMKLREVYDILSNDESRRFYDWTLAQEAASIRAEKM 341
           AYRRLSKEYHPDTT+LPLKAAS+KF+KLREVYD+L ++E RRFYDWTLAQEAAS +AEKM
Sbjct: 129 AYRRLSKEYHPDTTSLPLKAASDKFLKLREVYDVLCDEERRRFYDWTLAQEAASRKAEKM 188

Query: 340 KVKFDDPYEQELKNFESIPDTVDRLRXXXXXXXXXXXXXXXXXXXXXXXXXSQAALTVDA 161
           K+K +DPY+++++N+ESIPD VDRL                          +  ALT D 
Sbjct: 189 KMKLEDPYQKDVQNWESIPDMVDRL----------------GGRNMELSDQAVTALTFDI 232

Query: 160 VILVFSICCIVYVIFFKEP 104
           +I++F+ICCI+YV+ FKEP
Sbjct: 233 LIIIFAICCIIYVLVFKEP 251


>gb|AFK34686.1| unknown [Medicago truncatula]
          Length = 247

 Score =  162 bits (409), Expect = 4e-38
 Identities = 79/138 (57%), Positives = 98/138 (71%)
 Frame = -2

Query: 520 AYRRLSKEYHPDTTTLPLKAASEKFMKLREVYDILSNDESRRFYDWTLAQEAASIRAEKM 341
           A+R+LSKEYHPDTT+LPLK ASEKFMKL+EVY +LSN+ESRRFYDWTLAQE AS + EK+
Sbjct: 125 AFRKLSKEYHPDTTSLPLKTASEKFMKLKEVYTVLSNEESRRFYDWTLAQEVASRQQEKL 184

Query: 340 KVKFDDPYEQELKNFESIPDTVDRLRXXXXXXXXXXXXXXXXXXXXXXXXXSQAALTVDA 161
           K+K +DPYE  LKN+E +PD VDRL                          + +A+T+D 
Sbjct: 185 KIKLEDPYEVALKNYEPVPDMVDRL----------------GGKNMKLSDQAVSAITIDI 228

Query: 160 VILVFSICCIVYVIFFKE 107
            I++FSICCI YV+FFKE
Sbjct: 229 FIIIFSICCITYVVFFKE 246


Top