BLASTX nr result

ID: Coptis25_contig00021242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021242
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96563.1| unknown [Populus trichocarpa x Populus deltoides]       94   6e-17
ref|XP_002324385.1| predicted protein [Populus trichocarpa] gi|2...    92   1e-16
ref|XP_002515345.1| conserved hypothetical protein [Ricinus comm...    91   3e-16
ref|XP_004169516.1| PREDICTED: uncharacterized LOC101218277 [Cuc...    89   1e-15
ref|XP_002280476.2| PREDICTED: uncharacterized protein LOC100259...    89   1e-15

>gb|ABK96563.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 249

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 47/88 (53%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
 Frame = -2

Query: 712 ALGTMGSLEESLPIKRGLSNFYAGKSKSFANLLE---VTTIAELAKPENPYNKRRRSVMA 542
           ALG++ S+E++LPIKRGLSN + GKSKSF NL E   V T+ EL KPENP+NKRRR +MA
Sbjct: 97  ALGSLNSMEDALPIKRGLSNHFTGKSKSFTNLAEVNTVNTVKELEKPENPFNKRRRILMA 156

Query: 541 SKWHATGRTYYSSLDLPSTPAMNDHDQQ 458
           +KW  + R++YS  +  S P +  H+++
Sbjct: 157 NKW--SRRSFYSWSNPKSMPLLTMHEEE 182


>ref|XP_002324385.1| predicted protein [Populus trichocarpa] gi|222865819|gb|EEF02950.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 47/88 (53%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
 Frame = -2

Query: 712 ALGTMGSLEESLPIKRGLSNFYAGKSKSFANLLE---VTTIAELAKPENPYNKRRRSVMA 542
           ALG++ S+E++LPIKRGLSN + GKSKSF NL E   V T+ EL KPENP+NKRRR +MA
Sbjct: 97  ALGSLNSMEDALPIKRGLSNHFTGKSKSFTNLGEVNTVNTVKELEKPENPFNKRRRILMA 156

Query: 541 SKWHATGRTYYSSLDLPSTPAMNDHDQQ 458
           +KW  + R++YS  +  S P +  H+++
Sbjct: 157 NKW--SRRSFYSWSNPKSMPLLTMHEEE 182


>ref|XP_002515345.1| conserved hypothetical protein [Ricinus communis]
           gi|223545289|gb|EEF46794.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 257

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 46/98 (46%), Positives = 70/98 (71%), Gaps = 9/98 (9%)
 Frame = -2

Query: 715 GALGTMGSLEESLPIKRGLSNFYAGKSKSFANLLEVT----TIAELAKPENPYNKRRRSV 548
           GA+ ++ +LE+SLPIKRGLSN +AGKSKSF NL +V+    T+ +L KPENP+NKRRR++
Sbjct: 91  GAIVSLDALEDSLPIKRGLSNHFAGKSKSFTNLSDVSSSVNTVKDLVKPENPFNKRRRTL 150

Query: 547 MASKWHATGRTYYSSLDLPSTPAM-----NDHDQQAQR 449
           MA+KW+    ++YS  +  S P +      + +++AQ+
Sbjct: 151 MANKWYRRKSSFYSWSNPKSMPLLALAEEEEEEEEAQQ 188


>ref|XP_004169516.1| PREDICTED: uncharacterized LOC101218277 [Cucumis sativus]
          Length = 225

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
 Frame = -2

Query: 817 SKHSSCILEIKDTVLKSGDDHLGISKVXXXXXXEGALGTMGSLEESLPIKRGLSNFYAGK 638
           S  SS  + + D    S DD  G  +V       G  G + SLE++LPIKRGLS+ ++GK
Sbjct: 56  SSESSSSIGVPDG--DSDDDGGGGDEVQSKPKEGGLCG-LESLEKALPIKRGLSSHFSGK 112

Query: 637 SKSFANLLEVTTIAELAKPENPYNKRRRSVMASKWHATGRTYYSSLDLPSTP--AMNDHD 464
           SKSFANL EV  + +L K ENP+NKRRR +MASKW     ++Y+  +  S P  A+N+++
Sbjct: 113 SKSFANLSEVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENN 172

Query: 463 QQAQRNNGE 437
           ++ + +  E
Sbjct: 173 EEEEEDGKE 181


>ref|XP_002280476.2| PREDICTED: uncharacterized protein LOC100259275 [Vitis vinifera]
          Length = 220

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 52/127 (40%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
 Frame = -2

Query: 817 SKHSSCILEIKDTVLKSGDDHLGISKVXXXXXXEGALG--TMGSLEESLPIKRGLSNFYA 644
           S  +S +  + D     GDD +  S            G  ++GSLE+SLPIKRGLSN ++
Sbjct: 62  SSEASSLGNLSDDEDDEGDDVVSSSGGGGNDVVSANAGFASLGSLEDSLPIKRGLSNCFS 121

Query: 643 GKSKSFANLLEVTTIAELAKPENPYNKRRRSVMASKWHATGRTYYSSLDLPSTPAMNDHD 464
           G+SKSFANL +V T+A+L K ENP+NKRRR+++A K       +YS  +  S P +   +
Sbjct: 122 GRSKSFANLSDVNTVADLQKEENPFNKRRRTLIAYKLSRKNSGFYSWQNPNSMPLLTLKE 181

Query: 463 QQAQRNN 443
              Q NN
Sbjct: 182 DPNQENN 188


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