BLASTX nr result

ID: Coptis25_contig00021236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021236
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270203.2| PREDICTED: BRCT domain-containing protein At...   339   4e-91
emb|CAN62071.1| hypothetical protein VITISV_036193 [Vitis vinifera]   339   4e-91
emb|CBI36933.3| unnamed protein product [Vitis vinifera]              332   4e-89
ref|XP_002301504.1| predicted protein [Populus trichocarpa] gi|2...   313   3e-83
ref|XP_003536871.1| PREDICTED: uncharacterized protein LOC100785...   311   8e-83

>ref|XP_002270203.2| PREDICTED: BRCT domain-containing protein At4g02110-like [Vitis
            vinifera]
          Length = 1314

 Score =  339 bits (870), Expect = 4e-91
 Identities = 168/250 (67%), Positives = 191/250 (76%)
 Frame = -3

Query: 752  ESEKAKEVQRPASKPKGKTSYLKNTSKQMDAEKENKPMETGSLSTSSGEHKRETVAAKLS 573
            ++EK   V   A K    T  +      ++ EKENKP+  G  +TS  + +    A   +
Sbjct: 835  KAEKENRVPDSAGKTSANTKPVMKLKNSIEIEKENKPIGDGDRNTSQRKQQTGKSAIASN 894

Query: 572  RASMQIRKTVCGINVDGIQLGGGSQIFRPEPAWFIVSGHRLQRKEFQQVIRRLKGRVCRD 393
            RA +   K    I+ D   +   S I + EPAWFI+SGH+LQRKEFQQVI+RLKGR CRD
Sbjct: 895  RAPVTTTKNFAKIDADLTPVEKASNILKTEPAWFILSGHKLQRKEFQQVIKRLKGRSCRD 954

Query: 392  SHNWSYQATHFIVPDPIRRTEKFFAAAASGRWILKTDYLTASNQAGKLLPEELYEWFKNG 213
            SH+WSYQATHFIVPDPIRRTEKFFAAAA+GRWILKTDYLTAS+QAGK L EE YEW KNG
Sbjct: 955  SHHWSYQATHFIVPDPIRRTEKFFAAAAAGRWILKTDYLTASSQAGKFLAEEPYEWHKNG 1014

Query: 212  FSEDGAINLEAPRKWRLLRERTGHGAFHGMRIVIYGDCIAPPLDTLKRVVKAGDGVILAT 33
             SEDGAINLEAPRKWRLLRERTGHGAF+GMRI+IYG+CIAPPLDTLKRVVKAGDG ILAT
Sbjct: 1015 LSEDGAINLEAPRKWRLLRERTGHGAFYGMRIIIYGECIAPPLDTLKRVVKAGDGTILAT 1074

Query: 32   SPPYTRFLKS 3
            SPPYTRFLKS
Sbjct: 1075 SPPYTRFLKS 1084


>emb|CAN62071.1| hypothetical protein VITISV_036193 [Vitis vinifera]
          Length = 1391

 Score =  339 bits (870), Expect = 4e-91
 Identities = 168/250 (67%), Positives = 191/250 (76%)
 Frame = -3

Query: 752  ESEKAKEVQRPASKPKGKTSYLKNTSKQMDAEKENKPMETGSLSTSSGEHKRETVAAKLS 573
            ++EK   V   A K    T  +      ++ EKENKP+  G  +TS  + +    A   +
Sbjct: 823  KAEKENRVPDSAGKTSANTKPVMKLKNSIEIEKENKPIGDGDRNTSQRKQQTGKSAIASN 882

Query: 572  RASMQIRKTVCGINVDGIQLGGGSQIFRPEPAWFIVSGHRLQRKEFQQVIRRLKGRVCRD 393
            RA +   K    I+ D   +   S I + EPAWFI+SGH+LQRKEFQQVI+RLKGR CRD
Sbjct: 883  RAPVTTTKNFAKIDADLTPVEKASNILKTEPAWFILSGHKLQRKEFQQVIKRLKGRSCRD 942

Query: 392  SHNWSYQATHFIVPDPIRRTEKFFAAAASGRWILKTDYLTASNQAGKLLPEELYEWFKNG 213
            SH+WSYQATHFIVPDPIRRTEKFFAAAA+GRWILKTDYLTAS+QAGK L EE YEW KNG
Sbjct: 943  SHHWSYQATHFIVPDPIRRTEKFFAAAAAGRWILKTDYLTASSQAGKFLAEEPYEWHKNG 1002

Query: 212  FSEDGAINLEAPRKWRLLRERTGHGAFHGMRIVIYGDCIAPPLDTLKRVVKAGDGVILAT 33
             SEDGAINLEAPRKWRLLRERTGHGAF+GMRI+IYG+CIAPPLDTLKRVVKAGDG ILAT
Sbjct: 1003 LSEDGAINLEAPRKWRLLRERTGHGAFYGMRIIIYGECIAPPLDTLKRVVKAGDGTILAT 1062

Query: 32   SPPYTRFLKS 3
            SPPYTRFLKS
Sbjct: 1063 SPPYTRFLKS 1072


>emb|CBI36933.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  332 bits (852), Expect = 4e-89
 Identities = 165/229 (72%), Positives = 186/229 (81%)
 Frame = -3

Query: 689 LKNTSKQMDAEKENKPMETGSLSTSSGEHKRETVAAKLSRASMQIRKTVCGINVDGIQLG 510
           LKN+   ++ EKENKP+  G  +TS  + +    A   +RA +   K    I+ D   + 
Sbjct: 3   LKNS---IEIEKENKPIGDGDRNTSQRKQQTGKSAIASNRAPVTTTKNFAKIDADLTPVE 59

Query: 509 GGSQIFRPEPAWFIVSGHRLQRKEFQQVIRRLKGRVCRDSHNWSYQATHFIVPDPIRRTE 330
             S I + EPAWFI+SGH+LQRKEFQQVI+RLKGR CRDSH+WSYQATHFIVPDPIRRTE
Sbjct: 60  KASNILKTEPAWFILSGHKLQRKEFQQVIKRLKGRSCRDSHHWSYQATHFIVPDPIRRTE 119

Query: 329 KFFAAAASGRWILKTDYLTASNQAGKLLPEELYEWFKNGFSEDGAINLEAPRKWRLLRER 150
           KFFAAAA+GRWILKTDYLTAS+QAGK L EE YEW KNG SEDGAINLEAPRKWRLLRER
Sbjct: 120 KFFAAAAAGRWILKTDYLTASSQAGKFLAEEPYEWHKNGLSEDGAINLEAPRKWRLLRER 179

Query: 149 TGHGAFHGMRIVIYGDCIAPPLDTLKRVVKAGDGVILATSPPYTRFLKS 3
           TGHGAF+GMRI+IYG+CIAPPLDTLKRVVKAGDG ILATSPPYTRFLKS
Sbjct: 180 TGHGAFYGMRIIIYGECIAPPLDTLKRVVKAGDGTILATSPPYTRFLKS 228


>ref|XP_002301504.1| predicted protein [Populus trichocarpa] gi|222843230|gb|EEE80777.1|
            predicted protein [Populus trichocarpa]
          Length = 1221

 Score =  313 bits (802), Expect = 3e-83
 Identities = 159/267 (59%), Positives = 192/267 (71%), Gaps = 3/267 (1%)
 Frame = -3

Query: 794  KNAELEMVSNDGKMESEKA-KEVQRPASKPKGKTSYL--KNTSKQMDAEKENKPMETGSL 624
            K   +E   N  K+E   A KE   P    +GK+  +  K +   ++AEKENKP   G  
Sbjct: 798  KVLNMEENLNGKKIEENAAEKESTEPHRAGQGKSRIISRKKSKNSVEAEKENKPAVDGDQ 857

Query: 623  STSSGEHKRETVAAKLSRASMQIRKTVCGINVDGIQLGGGSQIFRPEPAWFIVSGHRLQR 444
              S  + +    AAK ++A ++  + V   N+        ++  + EP WFI+SGHRLQR
Sbjct: 858  YASLDDKRVGETAAKSNKAPVKFNQKVSKSNLGSTTGREVTKQVKAEPLWFILSGHRLQR 917

Query: 443  KEFQQVIRRLKGRVCRDSHNWSYQATHFIVPDPIRRTEKFFAAAASGRWILKTDYLTASN 264
            KE+Q+VI+ LKG++CRDSH WSYQATH+I P PIRRTEKFFAAAASGRWILKTDYLTA +
Sbjct: 918  KEYQKVIKSLKGKLCRDSHQWSYQATHYIAPGPIRRTEKFFAAAASGRWILKTDYLTACS 977

Query: 263  QAGKLLPEELYEWFKNGFSEDGAINLEAPRKWRLLRERTGHGAFHGMRIVIYGDCIAPPL 84
            QAG+ L EE YEW KNG SEDG INLEAPRKWRLLRERTGHGAF+GMRI+IYG+C+ PPL
Sbjct: 978  QAGRFLAEESYEWHKNGLSEDGTINLEAPRKWRLLRERTGHGAFYGMRIIIYGECMTPPL 1037

Query: 83   DTLKRVVKAGDGVILATSPPYTRFLKS 3
            DTLKRVVKAGDG ILATSPPYTRF+ S
Sbjct: 1038 DTLKRVVKAGDGTILATSPPYTRFITS 1064


>ref|XP_003536871.1| PREDICTED: uncharacterized protein LOC100785416 [Glycine max]
          Length = 1118

 Score =  311 bits (798), Expect = 8e-83
 Identities = 161/260 (61%), Positives = 195/260 (75%), Gaps = 1/260 (0%)
 Frame = -3

Query: 779  EMVSNDGKMESEKAKEVQRPASKPKG-KTSYLKNTSKQMDAEKENKPMETGSLSTSSGEH 603
            E + N+ + E E     + P    K  + +  +N S+    EKEN+P++ G    S+G  
Sbjct: 702  EKIPNETEHEPEIETMEEMPLPDDKSDQPAIQRNKSENFAEEKENRPID-GEQGKSNGS- 759

Query: 602  KRETVAAKLSRASMQIRKTVCGINVDGIQLGGGSQIFRPEPAWFIVSGHRLQRKEFQQVI 423
               T+ + +  A ++ +K+  G+N     +   +   + E A FI+SGHRLQRKEFQQVI
Sbjct: 760  --STIKSSVRTAKIKSKKS--GLNPS---ITESNTRVKTEAACFILSGHRLQRKEFQQVI 812

Query: 422  RRLKGRVCRDSHNWSYQATHFIVPDPIRRTEKFFAAAASGRWILKTDYLTASNQAGKLLP 243
            +RLKGRVCRDSH WSYQATHFI PDPIRRTEKFFAAAASGRWILKTD+LTAS+QAGKLL 
Sbjct: 813  KRLKGRVCRDSHQWSYQATHFIAPDPIRRTEKFFAAAASGRWILKTDFLTASSQAGKLLA 872

Query: 242  EELYEWFKNGFSEDGAINLEAPRKWRLLRERTGHGAFHGMRIVIYGDCIAPPLDTLKRVV 63
            EE YEW +NGFSEDG IN+EAPRKWRLL+ERTGHGAF+GMRIV+YGDCIAPPLDTLKRV+
Sbjct: 873  EEPYEWHQNGFSEDGTINMEAPRKWRLLKERTGHGAFYGMRIVVYGDCIAPPLDTLKRVI 932

Query: 62   KAGDGVILATSPPYTRFLKS 3
            KAGDG ILATSPPYTRFL +
Sbjct: 933  KAGDGTILATSPPYTRFLST 952


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