BLASTX nr result
ID: Coptis25_contig00021234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00021234
(594 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro... 162 2e-55
ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 160 2e-55
ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|2... 160 4e-55
dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus] 160 5e-55
ref|XP_003617006.1| Ubiquitin carboxyl-terminal hydrolase [Medic... 159 8e-55
>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
product [Vitis vinifera]
Length = 1115
Score = 162 bits (411), Expect(3) = 2e-55
Identities = 86/131 (65%), Positives = 95/131 (72%), Gaps = 23/131 (17%)
Frame = -1
Query: 324 QTSDILYYEVSGIPLPELRVFKTLKVAFHHPTKHEVILR-IRLPKESTVGDLLNDLKRKV 148
QTSDILYYEV IPLPEL+ KTLKVAFHH TK EV++ IRLPK+STVGD++NDLK KV
Sbjct: 878 QTSDILYYEVLDIPLPELQGLKTLKVAFHHATKEEVVIHTIRLPKQSTVGDVINDLKSKV 937
Query: 147 KLSHPNAELRLLVIFYHKIYK----------------------IPEEEKNLGAQDRLIHV 34
+LSHPNAELRLL +FYHKIYK IPEEEKNLG DRLIHV
Sbjct: 938 ELSHPNAELRLLEVFYHKIYKIFPLNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHV 997
Query: 33 YHFTKDISQNQ 1
YHF KD +QNQ
Sbjct: 998 YHFMKDTTQNQ 1008
Score = 52.0 bits (123), Expect(3) = 2e-55
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = -2
Query: 593 FNYDEVVKRVAGELKVDDPSKVRLTGHDCYSQ 498
FNYD+VV+RVA L +DD SK+RLT H+CYSQ
Sbjct: 823 FNYDDVVERVAAHLGLDDSSKIRLTSHNCYSQ 854
Score = 48.1 bits (113), Expect(3) = 2e-55
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = -3
Query: 496 SQQPKPTPIRYQGVDHLSDMLVHYRK 419
SQQPKP PI+Y+GV+HLSDML+HY +
Sbjct: 853 SQQPKPQPIKYRGVEHLSDMLLHYNQ 878
>ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
sativus] gi|449503435|ref|XP_004162001.1| PREDICTED:
ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
sativus]
Length = 1118
Score = 160 bits (405), Expect(3) = 2e-55
Identities = 85/131 (64%), Positives = 95/131 (72%), Gaps = 23/131 (17%)
Frame = -1
Query: 324 QTSDILYYEVSGIPLPELRVFKTLKVAFHHPTKHEVILR-IRLPKESTVGDLLNDLKRKV 148
QTSDILYYEV IPLPEL+ KTLKVAFHH TK EV++ IRLPK+STV D++NDLK KV
Sbjct: 881 QTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVADVINDLKTKV 940
Query: 147 KLSHPNAELRLLVIFYHKIYK----------------------IPEEEKNLGAQDRLIHV 34
+LSHP+AELRLL +FYHKIYK IPEEEKNLG DRLIHV
Sbjct: 941 ELSHPDAELRLLEVFYHKIYKVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHV 1000
Query: 33 YHFTKDISQNQ 1
YHFTKD +QNQ
Sbjct: 1001 YHFTKDTAQNQ 1011
Score = 52.8 bits (125), Expect(3) = 2e-55
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = -2
Query: 593 FNYDEVVKRVAGELKVDDPSKVRLTGHDCYSQ 498
+ YDEVV+R+A +L VDDPSK+RLT H+CYSQ
Sbjct: 826 YTYDEVVERLAQQLGVDDPSKIRLTSHNCYSQ 857
Score = 49.3 bits (116), Expect(3) = 2e-55
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = -3
Query: 496 SQQPKPTPIRYQGVDHLSDMLVHYRK 419
SQQPKP PI+Y+GV+HLSDMLVHY +
Sbjct: 856 SQQPKPQPIKYRGVEHLSDMLVHYNQ 881
>ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|222865510|gb|EEF02641.1|
predicted protein [Populus trichocarpa]
Length = 1116
Score = 160 bits (405), Expect(3) = 4e-55
Identities = 85/131 (64%), Positives = 95/131 (72%), Gaps = 23/131 (17%)
Frame = -1
Query: 324 QTSDILYYEVSGIPLPELRVFKTLKVAFHHPTKHEVILR-IRLPKESTVGDLLNDLKRKV 148
QTSDILYYEV IPLPEL+ KTLKVAFHH TK EV++ IRLPK+STVGD++NDLK KV
Sbjct: 879 QTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVINDLKTKV 938
Query: 147 KLSHPNAELRLLVIFYHKIYK----------------------IPEEEKNLGAQDRLIHV 34
+LSHP+AELRLL +FYHKIYK IPEEEKNLG DRLIHV
Sbjct: 939 ELSHPSAELRLLEVFYHKIYKIFPHNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHV 998
Query: 33 YHFTKDISQNQ 1
YHF KD +QNQ
Sbjct: 999 YHFMKDTTQNQ 1009
Score = 50.8 bits (120), Expect(3) = 4e-55
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = -3
Query: 496 SQQPKPTPIRYQGVDHLSDMLVHYRK 419
SQQPKP PI+Y+GVDHLSDMLVHY +
Sbjct: 854 SQQPKPQPIKYRGVDHLSDMLVHYNQ 879
Score = 50.4 bits (119), Expect(3) = 4e-55
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = -2
Query: 587 YDEVVKRVAGELKVDDPSKVRLTGHDCYSQ 498
YD+VV+RVA L +DDPSK+RLT H+CYSQ
Sbjct: 826 YDDVVERVANHLGLDDPSKIRLTSHNCYSQ 855
>dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus]
Length = 1118
Score = 160 bits (404), Expect(3) = 5e-55
Identities = 85/131 (64%), Positives = 95/131 (72%), Gaps = 23/131 (17%)
Frame = -1
Query: 324 QTSDILYYEVSGIPLPELRVFKTLKVAFHHPTKHEVILR-IRLPKESTVGDLLNDLKRKV 148
QTSDILYYE+ IPLPEL+ KTLKVAF+H TK EV+ IRLPK+STVGD+L+DLK KV
Sbjct: 881 QTSDILYYEILDIPLPELQGLKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKV 940
Query: 147 KLSHPNAELRLLVIFYHKIYK----------------------IPEEEKNLGAQDRLIHV 34
+LSHPNAELRLL +FYHKIYK +PEEEKNLG DRLIHV
Sbjct: 941 ELSHPNAELRLLEVFYHKIYKVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHV 1000
Query: 33 YHFTKDISQNQ 1
YHFTKD SQNQ
Sbjct: 1001 YHFTKDTSQNQ 1011
Score = 50.8 bits (120), Expect(3) = 5e-55
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = -3
Query: 496 SQQPKPTPIRYQGVDHLSDMLVHYRK 419
SQQPKP PI+Y+GVDHLSDMLVHY +
Sbjct: 856 SQQPKPQPIKYRGVDHLSDMLVHYNQ 881
Score = 50.4 bits (119), Expect(3) = 5e-55
Identities = 20/32 (62%), Positives = 28/32 (87%)
Frame = -2
Query: 593 FNYDEVVKRVAGELKVDDPSKVRLTGHDCYSQ 498
+ YD+VV++VA +L +DDPSK+RLT H+CYSQ
Sbjct: 826 YTYDDVVEKVAQQLNLDDPSKIRLTPHNCYSQ 857
>ref|XP_003617006.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355518341|gb|AES99964.1| Ubiquitin carboxyl-terminal
hydrolase [Medicago truncatula]
Length = 1123
Score = 159 bits (402), Expect(3) = 8e-55
Identities = 85/131 (64%), Positives = 95/131 (72%), Gaps = 23/131 (17%)
Frame = -1
Query: 324 QTSDILYYEVSGIPLPELRVFKTLKVAFHHPTKHEVILR-IRLPKESTVGDLLNDLKRKV 148
QTSDILYYEV IPLPEL+ KTLKVAFHH TK EV++ IRLPK+STVGD+L DLK+KV
Sbjct: 886 QTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVLEDLKKKV 945
Query: 147 KLSHPNAELRLLVIFYHKIYK----------------------IPEEEKNLGAQDRLIHV 34
+LS P+AELRLL +FYHKIYK IPEEEKNLG DRLIHV
Sbjct: 946 ELSRPDAELRLLEVFYHKIYKVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHV 1005
Query: 33 YHFTKDISQNQ 1
YHFTKD +QNQ
Sbjct: 1006 YHFTKDTTQNQ 1016
Score = 52.0 bits (123), Expect(3) = 8e-55
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = -2
Query: 593 FNYDEVVKRVAGELKVDDPSKVRLTGHDCYSQ 498
F YD+VV+RVA +L +DDPSK+RLT H+CYSQ
Sbjct: 831 FTYDDVVERVAEQLGLDDPSKIRLTPHNCYSQ 862
Score = 49.3 bits (116), Expect(3) = 8e-55
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = -3
Query: 496 SQQPKPTPIRYQGVDHLSDMLVHYRK 419
SQQPKP PI+Y+GV+HLSDMLVHY +
Sbjct: 861 SQQPKPQPIKYRGVEHLSDMLVHYNQ 886