BLASTX nr result

ID: Coptis25_contig00021223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021223
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269798.2| PREDICTED: uncharacterized protein LOC100252...   145   4e-33
gb|EEC72483.1| hypothetical protein OsI_05847 [Oryza sativa Indi...   135   7e-30
gb|EEC72102.1| hypothetical protein OsI_05068 [Oryza sativa Indi...   134   1e-29
ref|NP_001045886.1| Os02g0147700 [Oryza sativa Japonica Group] g...   133   2e-29
ref|XP_003602435.1| DNA-binding protein BIN4 [Medicago truncatul...   130   2e-28

>ref|XP_002269798.2| PREDICTED: uncharacterized protein LOC100252112 [Vitis vinifera]
           gi|302144012|emb|CBI23117.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score =  145 bits (367), Expect = 4e-33
 Identities = 95/208 (45%), Positives = 117/208 (56%), Gaps = 14/208 (6%)
 Frame = +3

Query: 3   KKKKNIEMSNSREASPDWLQSFQAPTKAFLSLSSDSEPSPTNSFIGEDDISDNEEPVVEK 182
           +KK ++E  +  E +        AP  +   LSSDSE  P NS + ED I  +EE  V K
Sbjct: 86  RKKASVEKPSDGEPN--------APNHSVWKLSSDSESCPDNSSMREDYIH-HEESSVHK 136

Query: 183 TDK--DQEKTILIHSGEDXXXXXXXXXXXXXXXXXXVETP------------KQKGYDVK 320
           T +  D+EK  ++                       VE              K KG+D  
Sbjct: 137 TTQFPDKEKDAVLSENGQESLLNEASKEKSPKKRVKVEDHISSKKKKANSDMKGKGHDDG 196

Query: 321 EEAVKEDIPKKPVEPHVSSRLPLVMSEKVQRSKALVECEGESIDMSGDVGAVGRVVITDD 500
            E ++E+   K  EP VSS LPLV+SEKV RSKALVECEGESID+SGD+GAVGR+VI D 
Sbjct: 197 TELLEEEASDKHTEPQVSSGLPLVLSEKVHRSKALVECEGESIDLSGDMGAVGRIVILDT 256

Query: 501 LSGDPEMLLDLKGTIYKTTIVPSRTFCV 584
            S + EM LDLKGTIYKTTIVPSRTFC+
Sbjct: 257 PSRNHEMFLDLKGTIYKTTIVPSRTFCI 284


>gb|EEC72483.1| hypothetical protein OsI_05847 [Oryza sativa Indica Group]
          Length = 342

 Score =  135 bits (339), Expect = 7e-30
 Identities = 89/227 (39%), Positives = 121/227 (53%), Gaps = 45/227 (19%)
 Frame = +3

Query: 39  EASPDWLQSFQAPTKAFLSLSSDSEPSPTNSFI-----GEDDISDNEE------------ 167
           E  PDWL++FQ PT + + LSS S+ SP NS       GE+   +N+             
Sbjct: 5   EEDPDWLRAFQPPTTSTVMLSSGSDDSPENSPTRTTPSGEEQKGENKASSDHAGDGDAAA 64

Query: 168 --------PVVEKT--------DKDQEKTILIHSGEDXXXXXXXXXXXXXXXXXXVETPK 299
                   P   KT        DKD++ T+   S +D                      K
Sbjct: 65  LNKGKKATPTRRKTPTSQEDAFDKDEKPTM--ESNQDKPPKRSTPKKKLVKPPSGSNASK 122

Query: 300 QKG-----------YDVKEEAV-KEDIPKKPVEPHVSSRLPLVMSEKVQRSKALVECEGE 443
             G            + +EE V +ED+  K  E  VS RLPL++ +K+QRSKAL+EC+G+
Sbjct: 123 VTGPKAGPDQIDDTLEHQEEGVAEEDMQDKLTEHSVSQRLPLIIPDKIQRSKALIECDGD 182

Query: 444 SIDMSGDVGAVGRVVITDDLSGDPEMLLDLKGTIYKTTIVPSRTFCV 584
           SID+SGDVGAVGR++I++  +G+ E+LLDLKGTIYK+TIVPSRTFCV
Sbjct: 183 SIDLSGDVGAVGRIIISNSPNGNQELLLDLKGTIYKSTIVPSRTFCV 229


>gb|EEC72102.1| hypothetical protein OsI_05068 [Oryza sativa Indica Group]
          Length = 473

 Score =  134 bits (337), Expect = 1e-29
 Identities = 89/224 (39%), Positives = 118/224 (52%), Gaps = 42/224 (18%)
 Frame = +3

Query: 39  EASPDWLQSFQAPTKAFLSLSSDSEPSPTNS--------------------FIGEDDISD 158
           E  PDWL++FQ PT + + LSSDS  SP NS                     +G+ D++ 
Sbjct: 137 EEDPDWLRAFQPPTTSTVMLSSDSYDSPENSPTRTTPSGEEQKGENKASSDHVGDGDVAS 196

Query: 159 NEE-----PVVEKTDKDQEKTI------LIHSGEDXXXXXXXXXXXXXXXXXX----VET 293
             +     P   KT   QE          + S +D                      V  
Sbjct: 197 PNKGKKATPTRRKTPTSQEDAFGKDEKPTMESNQDKPAKRSTPKKLVKFPSSSNASKVTG 256

Query: 294 PKQKGYDV------KEEAVKE-DIPKKPVEPHVSSRLPLVMSEKVQRSKALVECEGESID 452
           PK     +      +EE V E D+  K  E  VS RLPL++ +KVQRSKAL+EC+G+SID
Sbjct: 257 PKAGPDQIDDTLEHREEGVAEVDMQDKLTEHSVSQRLPLIIPDKVQRSKALIECDGDSID 316

Query: 453 MSGDVGAVGRVVITDDLSGDPEMLLDLKGTIYKTTIVPSRTFCV 584
           +SGDVGAVGR+VI++  +G+ ++LLDLKGTIYK+TIVPSRTFCV
Sbjct: 317 LSGDVGAVGRIVISNSPNGNQDLLLDLKGTIYKSTIVPSRTFCV 360


>ref|NP_001045886.1| Os02g0147700 [Oryza sativa Japonica Group]
           gi|113535417|dbj|BAF07800.1| Os02g0147700 [Oryza sativa
           Japonica Group] gi|215765268|dbj|BAG86965.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222622166|gb|EEE56298.1| hypothetical protein
           OsJ_05371 [Oryza sativa Japonica Group]
          Length = 342

 Score =  133 bits (335), Expect = 2e-29
 Identities = 88/227 (38%), Positives = 121/227 (53%), Gaps = 45/227 (19%)
 Frame = +3

Query: 39  EASPDWLQSFQAPTKAFLSLSSDSEPSPTNSFI-----GEDDISDNEE------------ 167
           E  PDWL++FQ PT + + LSS S+ SP NS       GE+   +N+             
Sbjct: 5   EEDPDWLRAFQPPTTSTVMLSSGSDDSPENSPTRTTPSGEEQKGENKASSDHAGDGDAAA 64

Query: 168 --------PVVEKT--------DKDQEKTILIHSGEDXXXXXXXXXXXXXXXXXXVETPK 299
                   P   KT        DKD++ T+   S +D                      K
Sbjct: 65  LNKGKKATPTRRKTPTSQEDAFDKDEKPTM--ESNQDKPPKRSTPKKKLVKPPSGSNASK 122

Query: 300 QKG-----------YDVKEEAV-KEDIPKKPVEPHVSSRLPLVMSEKVQRSKALVECEGE 443
             G            + +EE V +E++  K  E  VS RLPL++ +K+QRSKAL+EC+G+
Sbjct: 123 VTGPKAGPDQIDDTLEHQEEGVAEEEMQDKLTEHSVSQRLPLIIPDKIQRSKALIECDGD 182

Query: 444 SIDMSGDVGAVGRVVITDDLSGDPEMLLDLKGTIYKTTIVPSRTFCV 584
           SID+SGDVGAVGR++I++  +G+ E+LLDLKGTIYK+TIVPSRTFCV
Sbjct: 183 SIDLSGDVGAVGRIIISNSPNGNQELLLDLKGTIYKSTIVPSRTFCV 229


>ref|XP_003602435.1| DNA-binding protein BIN4 [Medicago truncatula]
           gi|355491483|gb|AES72686.1| DNA-binding protein BIN4
           [Medicago truncatula]
          Length = 416

 Score =  130 bits (326), Expect = 2e-28
 Identities = 84/205 (40%), Positives = 113/205 (55%), Gaps = 11/205 (5%)
 Frame = +3

Query: 3   KKKKNIEMSNSREASPDWLQSFQAPTKAFLSLSSDSEPSPTNSFIGEDDISDNEEPVVEK 182
           K++K I++ +  +   +  +S  +       LSSDSE    +S   ED I   E      
Sbjct: 103 KEEKKIKLDSDTDKEAEHKESIHS----MWELSSDSESCRDHSPKTEDQIDQVETKPQTS 158

Query: 183 TDKDQEKTILIHSGEDXXXXXXXXXXXXXXXXXXVETP----------KQKGYDVKEEAV 332
               ++  +  + G+                     TP          K KG D   E  
Sbjct: 159 QPPGEDGLLRDNDGKSPSKKASKAKASQKQTDLEDCTPVKGKKTKVNAKGKGGDGDVEVK 218

Query: 333 KEDIPKKPVEPHVSSR-LPLVMSEKVQRSKALVECEGESIDMSGDVGAVGRVVITDDLSG 509
            E+  +KPVEP+VSS  LPL++SEKV R+KALVEC+G+SID+SGD+GAVGRV+I+D  SG
Sbjct: 219 DEETFEKPVEPNVSSSILPLMLSEKVHRTKALVECQGDSIDLSGDMGAVGRVIISDSPSG 278

Query: 510 DPEMLLDLKGTIYKTTIVPSRTFCV 584
           D EM LDLKGTIYKT+I+PSRTFCV
Sbjct: 279 DQEMCLDLKGTIYKTSIIPSRTFCV 303


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