BLASTX nr result

ID: Coptis25_contig00021212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021212
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526597.1| auxin:hydrogen symporter, putative [Ricinus ...    54   3e-06
ref|XP_002312429.1| predicted protein [Populus trichocarpa] gi|2...    54   6e-06
ref|XP_002314817.1| predicted protein [Populus trichocarpa] gi|2...    53   8e-06

>ref|XP_002526597.1| auxin:hydrogen symporter, putative [Ricinus communis]
           gi|223534037|gb|EEF35756.1| auxin:hydrogen symporter,
           putative [Ricinus communis]
          Length = 451

 Score = 53.5 bits (127), Expect(2) = 3e-06
 Identities = 27/45 (60%), Positives = 33/45 (73%)
 Frame = -1

Query: 164 SYYLLRAFASLKRYAVHATSSLLFQHHIFALFSLTMYITIFFNLL 30
           S  LL A ASL+ YAV   S+LLF  H+FALFSL++YI I+F LL
Sbjct: 404 SAILLGAIASLRGYAVKEASALLFWQHVFALFSLSLYIVIYFRLL 448



 Score = 22.3 bits (46), Expect(2) = 3e-06
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 238 NILDCDGQIYKFVLLLHNTIPTS 170
           N L     +Y+FVLLL  T P++
Sbjct: 383 NFLVIGDAMYRFVLLLQYTTPSA 405


>ref|XP_002312429.1| predicted protein [Populus trichocarpa] gi|222852249|gb|EEE89796.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 53.5 bits (127), Expect(2) = 6e-06
 Identities = 27/45 (60%), Positives = 33/45 (73%)
 Frame = -1

Query: 164 SYYLLRAFASLKRYAVHATSSLLFQHHIFALFSLTMYITIFFNLL 30
           S  LL A ASL+ YAV   S+LLF  H+FALFSL++YI I+F LL
Sbjct: 390 SAILLGAIASLRGYAVKEASALLFWQHVFALFSLSLYIVIYFKLL 434



 Score = 21.2 bits (43), Expect(2) = 6e-06
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 214 IYKFVLLLHNTIPTS 170
           +Y+FVLLL  T P++
Sbjct: 377 MYRFVLLLQYTTPSA 391


>ref|XP_002314817.1| predicted protein [Populus trichocarpa] gi|222863857|gb|EEF00988.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score = 53.1 bits (126), Expect(2) = 8e-06
 Identities = 27/45 (60%), Positives = 33/45 (73%)
 Frame = -1

Query: 164 SYYLLRAFASLKRYAVHATSSLLFQHHIFALFSLTMYITIFFNLL 30
           S  LL A ASL+ YAV   S+LLF  H+FALFSL++YI I+F LL
Sbjct: 402 SAILLGAIASLRGYAVKEASALLFWQHVFALFSLSLYIIIYFKLL 446



 Score = 21.2 bits (43), Expect(2) = 8e-06
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 214 IYKFVLLLHNTIPTS 170
           +Y+FVLLL  T P++
Sbjct: 389 MYRFVLLLQYTTPSA 403


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