BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021201
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...    81   1e-13
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...    72   4e-11
ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Me...    70   2e-10
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    70   2e-10
ref|XP_002862572.1| predicted protein [Arabidopsis lyrata subsp....    70   2e-10

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/75 (52%), Positives = 51/75 (68%)
 Frame = -3

Query: 538 AFTIADCMPHLRGLRLYLTCLTNQGLRAIIKGCPHLENLDLRGCCYNDLQEDLQKECLKK 359
           A  IA+ MP LR L+L+   LTN GL AI+ GCPHLE+LDLR C   DL  DL+K C+++
Sbjct: 519 ALAIAESMPELRHLQLFGNILTNVGLNAILDGCPHLEHLDLRKCSNVDLTGDLEKRCVER 578

Query: 358 IRDLSLPSSNVAPPP 314
           I+DL  P+ + A  P
Sbjct: 579 IKDLKRPTDSTAGHP 593



 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 33/72 (45%), Positives = 47/72 (65%)
 Frame = -3

Query: 538 AFTIADCMPHLRGLRLYLTCLTNQGLRAIIKGCPHLENLDLRGCCYNDLQEDLQKECLKK 359
           A  IA+ MP LR L+L    LTN GL AI+  C HL++LDLR C   +L ED  K+C+++
Sbjct: 188 AIAIAESMPELRHLQLLGNALTNTGLNAILDSCTHLDHLDLRQCYNINLVEDFMKQCVER 247

Query: 358 IRDLSLPSSNVA 323
           I+ L  P+ ++A
Sbjct: 248 IKYLRCPNDSIA 259


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/70 (51%), Positives = 48/70 (68%)
 Frame = -3

Query: 538 AFTIADCMPHLRGLRLYLTCLTNQGLRAIIKGCPHLENLDLRGCCYNDLQEDLQKECLKK 359
           A  IA+ MP LR L+L    LTN+GL AI+ GCPHLE+LDLR C   +L  DL+K C ++
Sbjct: 352 AKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFER 411

Query: 358 IRDLSLPSSN 329
           I+DL  P+ +
Sbjct: 412 IKDLRCPNDS 421



 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 34/72 (47%), Positives = 44/72 (61%)
 Frame = -3

Query: 529 IADCMPHLRGLRLYLTCLTNQGLRAIIKGCPHLENLDLRGCCYNDLQEDLQKECLKKIRD 350
           IA+ MP LR L+L+   LTN  L AI+  C HL +LDLR C   +L  DL+K C ++IRD
Sbjct: 25  IAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRCSERIRD 84

Query: 349 LSLPSSNVAPPP 314
           L  P  + A  P
Sbjct: 85  LRRPDDSTADSP 96


>ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355482929|gb|AES64132.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 208

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 35/68 (51%), Positives = 49/68 (72%)
 Frame = -3

Query: 541 VAFTIADCMPHLRGLRLYLTCLTNQGLRAIIKGCPHLENLDLRGCCYNDLQEDLQKECLK 362
           VAF+IA+ MP LR L+L+   ++N GLRAI+ GCP LE+LD+R C    L+  L K+C +
Sbjct: 14  VAFSIAETMPGLRHLQLFGNKMSNDGLRAILDGCPLLESLDIRQCFNLSLRGSLGKKCRE 73

Query: 361 KIRDLSLP 338
           +I+DL LP
Sbjct: 74  QIKDLRLP 81


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = -3

Query: 538 AFTIADCMPHLRGLRLYLTCLTNQGLRAIIKGCPHLENLDLRGCCYNDLQEDLQKECLKK 359
           AF IA+ MP L  L+L+   LTN+GL AI+ GCPHLE+LDLR C   +L   L K C ++
Sbjct: 191 AFAIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQ 250

Query: 358 IRDLSLP 338
           I++L LP
Sbjct: 251 IKELRLP 257


>ref|XP_002862572.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297308184|gb|EFH38830.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 304

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/75 (46%), Positives = 47/75 (62%)
 Frame = -3

Query: 538 AFTIADCMPHLRGLRLYLTCLTNQGLRAIIKGCPHLENLDLRGCCYNDLQEDLQKECLKK 359
           A  IA+ MP LR L+L    LTN GL  I+ GCPHLE+LD+R C    L  +L+K CL++
Sbjct: 204 ALAIAESMPKLRHLQLIWNGLTNTGLNVILDGCPHLEDLDVRKCFNIKLVGNLEKRCLER 263

Query: 358 IRDLSLPSSNVAPPP 314
           I++L  P  + A  P
Sbjct: 264 IKELRRPGDSTADYP 278