BLASTX nr result

ID: Coptis25_contig00021196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021196
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533940.1| mta/sah nucleosidase, putative [Ricinus comm...   124   8e-27
ref|XP_002262699.1| PREDICTED: bark storage protein A [Vitis vin...   118   4e-25
ref|NP_567699.1| phosphorylase family protein [Arabidopsis thali...    99   5e-19
gb|AAM66964.1| unknown [Arabidopsis thaliana]                          99   5e-19
ref|XP_002869723.1| hypothetical protein ARALYDRAFT_354336 [Arab...    97   2e-18

>ref|XP_002533940.1| mta/sah nucleosidase, putative [Ricinus communis]
           gi|223526095|gb|EEF28447.1| mta/sah nucleosidase,
           putative [Ricinus communis]
          Length = 317

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/84 (69%), Positives = 70/84 (83%)
 Frame = +3

Query: 72  AIPVSRQVSLRKVREVNREGPYIGLITVYPPEEKAFFATKAFQPHPSYPFIDLSGRRFRV 251
           A P +R  SL  +REVNR+GPY+GLITVYPPEE +FFAT AF+P+  +PF+DLSGRRFR+
Sbjct: 25  AFPSNRIKSLSIIREVNRQGPYLGLITVYPPEENSFFATGAFKPYGKHPFVDLSGRRFRI 84

Query: 252 GKIQDKSVIYVRCGVGTRNAATAT 323
           GKI++K VIYVRCGVG  NAA AT
Sbjct: 85  GKIREKKVIYVRCGVGMVNAAAAT 108


>ref|XP_002262699.1| PREDICTED: bark storage protein A [Vitis vinifera]
           gi|296090373|emb|CBI40192.3| unnamed protein product
           [Vitis vinifera]
          Length = 340

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/84 (64%), Positives = 68/84 (80%)
 Frame = +3

Query: 72  AIPVSRQVSLRKVREVNREGPYIGLITVYPPEEKAFFATKAFQPHPSYPFIDLSGRRFRV 251
           A P +++ SL  ++EVNR+GPYIGLITV+PPEE AFF T AF+ +P +PF+DLSGRRFR+
Sbjct: 26  ATPSNKRKSLNTIKEVNRKGPYIGLITVFPPEEDAFFTTGAFEINPHHPFVDLSGRRFRI 85

Query: 252 GKIQDKSVIYVRCGVGTRNAATAT 323
           GK+  + VIYVRCGVG  NAA AT
Sbjct: 86  GKVHGRKVIYVRCGVGMVNAAAAT 109


>ref|NP_567699.1| phosphorylase family protein [Arabidopsis thaliana]
           gi|26453148|dbj|BAC43650.1| unknown protein [Arabidopsis
           thaliana] gi|28950909|gb|AAO63378.1| At4g24340
           [Arabidopsis thaliana] gi|332659491|gb|AEE84891.1|
           phosphorylase family protein [Arabidopsis thaliana]
          Length = 338

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = +3

Query: 96  SLRKVREVNREGPYIGLITVYPPEEKAFFATKAFQPHPSYPFIDLSGRRFRVGKIQDKSV 275
           S   +R++NR GPYIGL+TV+  EE AF  +  F+  P++PF+DLSGRRFR+GKI  K V
Sbjct: 39  SATTIRKINRRGPYIGLVTVFETEEDAFLGSVDFRLDPTHPFLDLSGRRFRIGKIHGKKV 98

Query: 276 IYVRCGVGTRNAATAT 323
           +YVRCG+G  NAA AT
Sbjct: 99  VYVRCGIGMVNAAAAT 114


>gb|AAM66964.1| unknown [Arabidopsis thaliana]
          Length = 338

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = +3

Query: 96  SLRKVREVNREGPYIGLITVYPPEEKAFFATKAFQPHPSYPFIDLSGRRFRVGKIQDKSV 275
           S   +R++NR GPYIGL+TV+  EE AF  +  F+  P++PF+DLSGRRFR+GKI  K V
Sbjct: 39  SATTIRKINRRGPYIGLVTVFETEEDAFLGSVDFRLDPTHPFLDLSGRRFRIGKIHGKKV 98

Query: 276 IYVRCGVGTRNAATAT 323
           +YVRCG+G  NAA AT
Sbjct: 99  VYVRCGIGMVNAAAAT 114


>ref|XP_002869723.1| hypothetical protein ARALYDRAFT_354336 [Arabidopsis lyrata subsp.
           lyrata] gi|297315559|gb|EFH45982.1| hypothetical protein
           ARALYDRAFT_354336 [Arabidopsis lyrata subsp. lyrata]
          Length = 244

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
 Frame = +3

Query: 78  PVSRQVSLRKVREVNREGPYIGLITVYPPEEKAFFATKAFQPHPSYPFIDLSGR--RFRV 251
           P+    S   +R++NR GPYIGL+TV+  EE AF  +  F+P P +PF+DLSGR  RFR+
Sbjct: 37  PLHTTKSAITIRKLNRRGPYIGLVTVFETEENAFLGSVDFRPDPMHPFLDLSGRRFRFRI 96

Query: 252 GKIQDKSVIYVRCGVGTRNAATAT 323
           GKI  K V+YVRCG+G  NAA AT
Sbjct: 97  GKIHGKKVVYVRCGIGMVNAAAAT 120


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