BLASTX nr result
ID: Coptis25_contig00021179
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021179 (706 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI35900.3| unnamed protein product [Vitis vinifera] 100 1e-27 ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like... 94 1e-25 gb|ABG66112.1| expressed protein [Oryza sativa Japonica Group] 93 5e-21 gb|EEE51075.1| hypothetical protein OsJ_31772 [Oryza sativa Japo... 93 5e-21 gb|EEC67090.1| hypothetical protein OsI_33882 [Oryza sativa Indi... 92 1e-20 >emb|CBI35900.3| unnamed protein product [Vitis vinifera] Length = 5267 Score = 100 bits (249), Expect(2) = 1e-27 Identities = 58/127 (45%), Positives = 75/127 (59%) Frame = -2 Query: 705 FSRALDLAPFLLRSVLSYFKFSPPPFQRLLGANSASQLLEKDGPQLLDAVRASLRLLLAE 526 F RALDLAPFLL S LSYF+F+PPPF+R+L S S+L K G LL++V+ + R LL E Sbjct: 76 FCRALDLAPFLLGSTLSYFRFAPPPFERMLIKGSVSELPAKAGKHLLNSVQTAYRFLLME 135 Query: 525 SQIFSTXXXXXXXXXLVHQSASALSGKDLDLVNIGFDIRWCAVQILSIALKMSERVTVNF 346 +FS LV + A+ D V DIRWC +QIL + LKM++ NF Sbjct: 136 PDVFSRLWDWSCFLDLVQKLANLDMVDDDKFVKNISDIRWCGLQILFVILKMNDTAIANF 195 Query: 345 TKDAEKA 325 AE+A Sbjct: 196 GIGAEEA 202 Score = 48.9 bits (115), Expect(2) = 1e-27 Identities = 26/70 (37%), Positives = 38/70 (54%) Frame = -3 Query: 215 RWEEFCRDVSLEKAGWYLGANVLEMGAYVDRDPVFNQENRLKSFDFRRSNVSLSLTNEIK 36 RWEE C DV+ EKAGWY ++ + ++ D F+QEN L+ F VS S E + Sbjct: 208 RWEELCEDVAQEKAGWYFESSKQQKPDSINPDIDFDQENCLRFFGLNNLAVSSSQFPEAQ 267 Query: 35 TLRKNRRHIS 6 + RR ++ Sbjct: 268 PSTRIRRLVT 277 >ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera] Length = 5286 Score = 94.0 bits (232), Expect(2) = 1e-25 Identities = 57/127 (44%), Positives = 74/127 (58%) Frame = -2 Query: 705 FSRALDLAPFLLRSVLSYFKFSPPPFQRLLGANSASQLLEKDGPQLLDAVRASLRLLLAE 526 F RALDLAPFLL S LSYF+F+PPPF+R+L S S+L K LL++V+ + R LL E Sbjct: 138 FCRALDLAPFLLGSTLSYFRFAPPPFERMLIKGSVSELPAK---HLLNSVQTAYRFLLME 194 Query: 525 SQIFSTXXXXXXXXXLVHQSASALSGKDLDLVNIGFDIRWCAVQILSIALKMSERVTVNF 346 +FS LV + A+ D V DIRWC +QIL + LKM++ NF Sbjct: 195 PDVFSRLWDWSCFLDLVQKLANLDMVDDDKFVKNISDIRWCGLQILFVILKMNDTAIANF 254 Query: 345 TKDAEKA 325 AE+A Sbjct: 255 GIGAEEA 261 Score = 48.9 bits (115), Expect(2) = 1e-25 Identities = 26/70 (37%), Positives = 38/70 (54%) Frame = -3 Query: 215 RWEEFCRDVSLEKAGWYLGANVLEMGAYVDRDPVFNQENRLKSFDFRRSNVSLSLTNEIK 36 RWEE C DV+ EKAGWY ++ + ++ D F+QEN L+ F VS S E + Sbjct: 267 RWEELCEDVAQEKAGWYFESSKQQKPDSINPDIDFDQENCLRFFGLNNLAVSSSQFPEAQ 326 Query: 35 TLRKNRRHIS 6 + RR ++ Sbjct: 327 PSTRIRRLVT 336 >gb|ABG66112.1| expressed protein [Oryza sativa Japonica Group] Length = 5157 Score = 93.2 bits (230), Expect(2) = 5e-21 Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Frame = -2 Query: 702 SRALDLAPFLLRSVLSYFKFSPPPFQRLLGANSASQLLEKDGPQ-LLDAVRASLRLLLAE 526 +RALDLAP+LLR +L+YFKF+PPPFQR L SQ+ K G LLDA + S R L E Sbjct: 132 ARALDLAPYLLRHLLNYFKFAPPPFQRFLSGGVPSQIPIKVGLHLLLDATQVSYRFLELE 191 Query: 525 SQIFSTXXXXXXXXXLVHQSASALSGKDLDLVNIGFDIRWCAVQILSIALKMSERVTVNF 346 ++F LV+ +A S D L ++ D+RWCA+QIL + LK S+ +F Sbjct: 192 PRVFCEQWDWSCFLDLVYSTAD-YSLVDDSLYSVVLDLRWCAIQILMVVLKASDEAVESF 250 Query: 345 TKDAEKANT 319 A++A T Sbjct: 251 GLGADEAFT 259 Score = 33.9 bits (76), Expect(2) = 5e-21 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = -3 Query: 215 RWEEFCRDVSLEKAGWYLGANVLE 144 RW+EFC D SLEKA YL A ++ Sbjct: 263 RWKEFCTDTSLEKASLYLQAEEVD 286 >gb|EEE51075.1| hypothetical protein OsJ_31772 [Oryza sativa Japonica Group] Length = 5128 Score = 93.2 bits (230), Expect(2) = 5e-21 Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Frame = -2 Query: 702 SRALDLAPFLLRSVLSYFKFSPPPFQRLLGANSASQLLEKDGPQ-LLDAVRASLRLLLAE 526 +RALDLAP+LLR +L+YFKF+PPPFQR L SQ+ K G LLDA + S R L E Sbjct: 132 ARALDLAPYLLRHLLNYFKFAPPPFQRFLSGGVPSQIPIKVGLHLLLDATQVSYRFLELE 191 Query: 525 SQIFSTXXXXXXXXXLVHQSASALSGKDLDLVNIGFDIRWCAVQILSIALKMSERVTVNF 346 ++F LV+ +A S D L ++ D+RWCA+QIL + LK S+ +F Sbjct: 192 PRVFCEQWDWSCFLDLVYSTAD-YSLVDDSLYSVVLDLRWCAIQILMVVLKASDEAVESF 250 Query: 345 TKDAEKANT 319 A++A T Sbjct: 251 GLGADEAFT 259 Score = 33.9 bits (76), Expect(2) = 5e-21 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = -3 Query: 215 RWEEFCRDVSLEKAGWYLGANVLE 144 RW+EFC D SLEKA YL A ++ Sbjct: 263 RWKEFCTDTSLEKASLYLQAEEVD 286 >gb|EEC67090.1| hypothetical protein OsI_33882 [Oryza sativa Indica Group] Length = 5024 Score = 91.7 bits (226), Expect(2) = 1e-20 Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 1/129 (0%) Frame = -2 Query: 702 SRALDLAPFLLRSVLSYFKFSPPPFQRLLGANSASQLLEKDGPQ-LLDAVRASLRLLLAE 526 +RALDLAP+LLR +L+YFKF+PPPFQR L SQ+ K G LLDA + S R L E Sbjct: 135 ARALDLAPYLLRHLLNYFKFAPPPFQRFLSGGVPSQIPIKVGLHLLLDATQVSYRFLELE 194 Query: 525 SQIFSTXXXXXXXXXLVHQSASALSGKDLDLVNIGFDIRWCAVQILSIALKMSERVTVNF 346 ++F LV+ +A S D L ++ D+RWC +QIL + LK S+ +F Sbjct: 195 PRVFCEQWDWSCFLDLVYSTAD-YSLVDDSLYSVVLDLRWCTIQILMVVLKASDEAVESF 253 Query: 345 TKDAEKANT 319 A++A T Sbjct: 254 GLGADEAFT 262 Score = 33.9 bits (76), Expect(2) = 1e-20 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = -3 Query: 215 RWEEFCRDVSLEKAGWYLGANVLE 144 RW+EFC D SLEKA YL A ++ Sbjct: 266 RWKEFCTDTSLEKASLYLQAEEVD 289