BLASTX nr result

ID: Coptis25_contig00021179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021179
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35900.3| unnamed protein product [Vitis vinifera]              100   1e-27
ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...    94   1e-25
gb|ABG66112.1| expressed protein [Oryza sativa Japonica Group]         93   5e-21
gb|EEE51075.1| hypothetical protein OsJ_31772 [Oryza sativa Japo...    93   5e-21
gb|EEC67090.1| hypothetical protein OsI_33882 [Oryza sativa Indi...    92   1e-20

>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  100 bits (249), Expect(2) = 1e-27
 Identities = 58/127 (45%), Positives = 75/127 (59%)
 Frame = -2

Query: 705 FSRALDLAPFLLRSVLSYFKFSPPPFQRLLGANSASQLLEKDGPQLLDAVRASLRLLLAE 526
           F RALDLAPFLL S LSYF+F+PPPF+R+L   S S+L  K G  LL++V+ + R LL E
Sbjct: 76  FCRALDLAPFLLGSTLSYFRFAPPPFERMLIKGSVSELPAKAGKHLLNSVQTAYRFLLME 135

Query: 525 SQIFSTXXXXXXXXXLVHQSASALSGKDLDLVNIGFDIRWCAVQILSIALKMSERVTVNF 346
             +FS          LV + A+     D   V    DIRWC +QIL + LKM++    NF
Sbjct: 136 PDVFSRLWDWSCFLDLVQKLANLDMVDDDKFVKNISDIRWCGLQILFVILKMNDTAIANF 195

Query: 345 TKDAEKA 325
              AE+A
Sbjct: 196 GIGAEEA 202



 Score = 48.9 bits (115), Expect(2) = 1e-27
 Identities = 26/70 (37%), Positives = 38/70 (54%)
 Frame = -3

Query: 215 RWEEFCRDVSLEKAGWYLGANVLEMGAYVDRDPVFNQENRLKSFDFRRSNVSLSLTNEIK 36
           RWEE C DV+ EKAGWY  ++  +    ++ D  F+QEN L+ F      VS S   E +
Sbjct: 208 RWEELCEDVAQEKAGWYFESSKQQKPDSINPDIDFDQENCLRFFGLNNLAVSSSQFPEAQ 267

Query: 35  TLRKNRRHIS 6
              + RR ++
Sbjct: 268 PSTRIRRLVT 277


>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score = 94.0 bits (232), Expect(2) = 1e-25
 Identities = 57/127 (44%), Positives = 74/127 (58%)
 Frame = -2

Query: 705 FSRALDLAPFLLRSVLSYFKFSPPPFQRLLGANSASQLLEKDGPQLLDAVRASLRLLLAE 526
           F RALDLAPFLL S LSYF+F+PPPF+R+L   S S+L  K    LL++V+ + R LL E
Sbjct: 138 FCRALDLAPFLLGSTLSYFRFAPPPFERMLIKGSVSELPAK---HLLNSVQTAYRFLLME 194

Query: 525 SQIFSTXXXXXXXXXLVHQSASALSGKDLDLVNIGFDIRWCAVQILSIALKMSERVTVNF 346
             +FS          LV + A+     D   V    DIRWC +QIL + LKM++    NF
Sbjct: 195 PDVFSRLWDWSCFLDLVQKLANLDMVDDDKFVKNISDIRWCGLQILFVILKMNDTAIANF 254

Query: 345 TKDAEKA 325
              AE+A
Sbjct: 255 GIGAEEA 261



 Score = 48.9 bits (115), Expect(2) = 1e-25
 Identities = 26/70 (37%), Positives = 38/70 (54%)
 Frame = -3

Query: 215 RWEEFCRDVSLEKAGWYLGANVLEMGAYVDRDPVFNQENRLKSFDFRRSNVSLSLTNEIK 36
           RWEE C DV+ EKAGWY  ++  +    ++ D  F+QEN L+ F      VS S   E +
Sbjct: 267 RWEELCEDVAQEKAGWYFESSKQQKPDSINPDIDFDQENCLRFFGLNNLAVSSSQFPEAQ 326

Query: 35  TLRKNRRHIS 6
              + RR ++
Sbjct: 327 PSTRIRRLVT 336


>gb|ABG66112.1| expressed protein [Oryza sativa Japonica Group]
          Length = 5157

 Score = 93.2 bits (230), Expect(2) = 5e-21
 Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
 Frame = -2

Query: 702 SRALDLAPFLLRSVLSYFKFSPPPFQRLLGANSASQLLEKDGPQ-LLDAVRASLRLLLAE 526
           +RALDLAP+LLR +L+YFKF+PPPFQR L     SQ+  K G   LLDA + S R L  E
Sbjct: 132 ARALDLAPYLLRHLLNYFKFAPPPFQRFLSGGVPSQIPIKVGLHLLLDATQVSYRFLELE 191

Query: 525 SQIFSTXXXXXXXXXLVHQSASALSGKDLDLVNIGFDIRWCAVQILSIALKMSERVTVNF 346
            ++F           LV+ +A   S  D  L ++  D+RWCA+QIL + LK S+    +F
Sbjct: 192 PRVFCEQWDWSCFLDLVYSTAD-YSLVDDSLYSVVLDLRWCAIQILMVVLKASDEAVESF 250

Query: 345 TKDAEKANT 319
              A++A T
Sbjct: 251 GLGADEAFT 259



 Score = 33.9 bits (76), Expect(2) = 5e-21
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 215 RWEEFCRDVSLEKAGWYLGANVLE 144
           RW+EFC D SLEKA  YL A  ++
Sbjct: 263 RWKEFCTDTSLEKASLYLQAEEVD 286


>gb|EEE51075.1| hypothetical protein OsJ_31772 [Oryza sativa Japonica Group]
          Length = 5128

 Score = 93.2 bits (230), Expect(2) = 5e-21
 Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
 Frame = -2

Query: 702 SRALDLAPFLLRSVLSYFKFSPPPFQRLLGANSASQLLEKDGPQ-LLDAVRASLRLLLAE 526
           +RALDLAP+LLR +L+YFKF+PPPFQR L     SQ+  K G   LLDA + S R L  E
Sbjct: 132 ARALDLAPYLLRHLLNYFKFAPPPFQRFLSGGVPSQIPIKVGLHLLLDATQVSYRFLELE 191

Query: 525 SQIFSTXXXXXXXXXLVHQSASALSGKDLDLVNIGFDIRWCAVQILSIALKMSERVTVNF 346
            ++F           LV+ +A   S  D  L ++  D+RWCA+QIL + LK S+    +F
Sbjct: 192 PRVFCEQWDWSCFLDLVYSTAD-YSLVDDSLYSVVLDLRWCAIQILMVVLKASDEAVESF 250

Query: 345 TKDAEKANT 319
              A++A T
Sbjct: 251 GLGADEAFT 259



 Score = 33.9 bits (76), Expect(2) = 5e-21
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 215 RWEEFCRDVSLEKAGWYLGANVLE 144
           RW+EFC D SLEKA  YL A  ++
Sbjct: 263 RWKEFCTDTSLEKASLYLQAEEVD 286


>gb|EEC67090.1| hypothetical protein OsI_33882 [Oryza sativa Indica Group]
          Length = 5024

 Score = 91.7 bits (226), Expect(2) = 1e-20
 Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
 Frame = -2

Query: 702 SRALDLAPFLLRSVLSYFKFSPPPFQRLLGANSASQLLEKDGPQ-LLDAVRASLRLLLAE 526
           +RALDLAP+LLR +L+YFKF+PPPFQR L     SQ+  K G   LLDA + S R L  E
Sbjct: 135 ARALDLAPYLLRHLLNYFKFAPPPFQRFLSGGVPSQIPIKVGLHLLLDATQVSYRFLELE 194

Query: 525 SQIFSTXXXXXXXXXLVHQSASALSGKDLDLVNIGFDIRWCAVQILSIALKMSERVTVNF 346
            ++F           LV+ +A   S  D  L ++  D+RWC +QIL + LK S+    +F
Sbjct: 195 PRVFCEQWDWSCFLDLVYSTAD-YSLVDDSLYSVVLDLRWCTIQILMVVLKASDEAVESF 253

Query: 345 TKDAEKANT 319
              A++A T
Sbjct: 254 GLGADEAFT 262



 Score = 33.9 bits (76), Expect(2) = 1e-20
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 215 RWEEFCRDVSLEKAGWYLGANVLE 144
           RW+EFC D SLEKA  YL A  ++
Sbjct: 266 RWKEFCTDTSLEKASLYLQAEEVD 289


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