BLASTX nr result

ID: Coptis25_contig00021159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021159
         (2295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521801.1| Patellin-3, putative [Ricinus communis] gi|2...    77   3e-11
gb|ABB77236.1| patellin 1 [Cucurbita pepo]                             74   2e-10
ref|XP_004170401.1| PREDICTED: patellin-3-like [Cucumis sativus]       73   4e-10
ref|XP_002271899.2| PREDICTED: patellin-5-like [Vitis vinifera]        71   1e-09
emb|CBI21668.3| unnamed protein product [Vitis vinifera]               71   1e-09

>ref|XP_002521801.1| Patellin-3, putative [Ricinus communis] gi|223539014|gb|EEF40611.1|
            Patellin-3, putative [Ricinus communis]
          Length = 627

 Score = 76.6 bits (187), Expect = 3e-11
 Identities = 60/156 (38%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
 Frame = +1

Query: 1015 GSVDRKLHSLAIKRALDCLQLQNQNCVT--AFINVPWWYLASNRMISPFLTIRTKSKLTL 1188
            G   R+L   A  +AL  LQ      V    FINVPWWYLA NRMISPFLT RTKSK   
Sbjct: 426  GPAKRELRQ-ATNQALAILQDNYPEFVAKQVFINVPWWYLAFNRMISPFLTQRTKSKFVF 484

Query: 1189 EGP--------------QYPFQIHCF*A*L*YGGLNKEGDQELSKADAVSELWGFFVVVG 1326
             GP              Q P Q         YGGL++EG QE S +DAV+E+     +  
Sbjct: 485  AGPSKSAETLFKYVAAEQVPVQ---------YGGLSREGVQEFSVSDAVTEV----TIKP 531

Query: 1327 ATTLDIAF-FEEKEVHVYTNYSLGVQLEWFKQLLPS 1431
            AT   + F F E+ + V+    +G  + +  + +PS
Sbjct: 532  ATKHTVEFSFSERCLLVWELRVVGWDVSYGAEFVPS 567


>gb|ABB77236.1| patellin 1 [Cucurbita pepo]
          Length = 604

 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 55/146 (37%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
 Frame = +1

Query: 1045 AIKRALDCLQLQNQNCVT--AFINVPWWYLASNRMISPFLTIRTKSKLTLEGP------- 1197
            A KRAL   Q           FINVPWWYLA NRMISPF T RTKSK    GP       
Sbjct: 411  ATKRALQLFQDNYPEFAAKQVFINVPWWYLAVNRMISPFFTQRTKSKFVFAGPSKTAETL 470

Query: 1198 -------QYPFQIHCF*A*L*YGGLNKEGDQELSKADAVSELWGFFVVVGATTLDIAF-F 1353
                   Q P Q         YGGL++EG+QE S  D V+E+     +  AT   + F  
Sbjct: 471  FKYVTPEQVPVQ---------YGGLSREGEQEFSIDDPVTEV----AIKAATKHTVEFPI 517

Query: 1354 EEKEVHVYTNYSLGVQLEWFKQLLPS 1431
             E  + V+    +G  + +  + LPS
Sbjct: 518  SEPSLLVWELRVVGWDVSYGAEFLPS 543


>ref|XP_004170401.1| PREDICTED: patellin-3-like [Cucumis sativus]
          Length = 606

 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 46/102 (45%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
 Frame = +1

Query: 1045 AIKRALDCLQLQNQNCVT--AFINVPWWYLASNRMISPFLTIRTKSKLTLEGP------- 1197
            A +RAL  LQ           FINVPWWYLA NRMISPF T RTKSK    GP       
Sbjct: 413  ATRRALQLLQDNYPEFAAKQVFINVPWWYLAVNRMISPFFTQRTKSKFVFAGPSKTAETL 472

Query: 1198 -------QYPFQIHCF*A*L*YGGLNKEGDQELSKADAVSEL 1302
                   Q P Q         YGGL++EG+QE S  D V+E+
Sbjct: 473  FKYVAPEQVPVQ---------YGGLSREGEQEFSVEDPVTEV 505


>ref|XP_002271899.2| PREDICTED: patellin-5-like [Vitis vinifera]
          Length = 576

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 47/93 (50%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
 Frame = +1

Query: 1045 AIKRALDCLQLQNQNCVTA--FINVPWWYLASNRMISPFLTIRTKSKLTLEGPQYPFQ-- 1212
            A K+AL  LQ      V    FINVPWWYLA NRMISPFLT RTKSK    GP    +  
Sbjct: 386  ATKQALQLLQDNYPEFVAKQIFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETL 445

Query: 1213 ---IHCF*A*L*YGGLNKEGDQELSKADAVSEL 1302
               I      + YGGL+KEG  E   ADAV+E+
Sbjct: 446  FKYIAAEQVPVKYGGLSKEG--EFGTADAVTEI 476


>emb|CBI21668.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 47/93 (50%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
 Frame = +1

Query: 1045 AIKRALDCLQLQNQNCVTA--FINVPWWYLASNRMISPFLTIRTKSKLTLEGPQYPFQ-- 1212
            A K+AL  LQ      V    FINVPWWYLA NRMISPFLT RTKSK    GP    +  
Sbjct: 208  ATKQALQLLQDNYPEFVAKQIFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETL 267

Query: 1213 ---IHCF*A*L*YGGLNKEGDQELSKADAVSEL 1302
               I      + YGGL+KEG  E   ADAV+E+
Sbjct: 268  FKYIAAEQVPVKYGGLSKEG--EFGTADAVTEI 298


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