BLASTX nr result
ID: Coptis25_contig00021140
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021140 (650 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003551305.1| PREDICTED: uncharacterized protein LOC100788... 112 8e-23 emb|CAN78614.1| hypothetical protein VITISV_028924 [Vitis vinifera] 106 4e-21 ref|XP_002280087.1| PREDICTED: uncharacterized protein LOC100265... 105 6e-21 ref|XP_003538289.1| PREDICTED: uncharacterized protein LOC100789... 104 1e-20 ref|XP_002313390.1| predicted protein [Populus trichocarpa] gi|2... 100 3e-19 >ref|XP_003551305.1| PREDICTED: uncharacterized protein LOC100788940 [Glycine max] Length = 92 Score = 112 bits (279), Expect = 8e-23 Identities = 58/91 (63%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = -2 Query: 466 MASFTIAFTPATGRVFAATAAKNTGGSKQEKGLIDWILGGMQKEDQFFETDPILQKAEDK 287 MAS ++F PATGRVFAATAAK GGSK+EKGL+DWILGG+QKEDQ ETDPIL+K E+K Sbjct: 1 MASIIMSFAPATGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEK 60 Query: 286 NEGTTGR--XXXXXXXXXXXKTSGFGGLFAK 200 N GTT K GFGGLFAK Sbjct: 61 NGGTTSNTGRNKNSVAVPQKKKGGFGGLFAK 91 >emb|CAN78614.1| hypothetical protein VITISV_028924 [Vitis vinifera] Length = 287 Score = 106 bits (264), Expect = 4e-21 Identities = 57/91 (62%), Positives = 66/91 (72%) Frame = -2 Query: 469 EMASFTIAFTPATGRVFAATAAKNTGGSKQEKGLIDWILGGMQKEDQFFETDPILQKAED 290 +MAS TIAF PA GRVFAATA K++GGS EKG++DWILGG+QKEDQ ETDPIL+K E+ Sbjct: 199 KMASLTIAFAPAAGRVFAATAEKSSGGSG-EKGILDWILGGLQKEDQMLETDPILKKVEE 257 Query: 289 KNEGTTGRXXXXXXXXXXXKTSGFGGLFAKK 197 KN G+ G K GFGGLFAKK Sbjct: 258 KNGGSNG-GRKNSVVVPPKKKGGFGGLFAKK 287 >ref|XP_002280087.1| PREDICTED: uncharacterized protein LOC100265554 isoform 1 [Vitis vinifera] Length = 88 Score = 105 bits (263), Expect = 6e-21 Identities = 57/90 (63%), Positives = 65/90 (72%) Frame = -2 Query: 466 MASFTIAFTPATGRVFAATAAKNTGGSKQEKGLIDWILGGMQKEDQFFETDPILQKAEDK 287 MAS TIAF PA GRVFAATA K++GGS EKG++DWILGG+QKEDQ ETDPIL+K E+K Sbjct: 1 MASLTIAFAPAAGRVFAATAEKSSGGSG-EKGILDWILGGLQKEDQMLETDPILKKVEEK 59 Query: 286 NEGTTGRXXXXXXXXXXXKTSGFGGLFAKK 197 N G+ G K GFGGLFAKK Sbjct: 60 NGGSNG-GRKNSVVVPPKKKGGFGGLFAKK 88 >ref|XP_003538289.1| PREDICTED: uncharacterized protein LOC100789683 [Glycine max] Length = 92 Score = 104 bits (260), Expect = 1e-20 Identities = 59/93 (63%), Positives = 66/93 (70%), Gaps = 4/93 (4%) Frame = -2 Query: 466 MASFTIAFTPATGRVFAATAAKNTGGSKQEKGLIDWILGGMQKEDQFFETDPILQKAEDK 287 MAS ++F PATGRVFAATAAK GGSK EKGL+DWI+GG+QKEDQ ETDPIL+K E+K Sbjct: 1 MASIIMSFAPATGRVFAATAAKGAGGSK-EKGLLDWIIGGLQKEDQLVETDPILKKVEEK 59 Query: 286 NEG----TTGRXXXXXXXXXXXKTSGFGGLFAK 200 N G TTGR K GFGGLFAK Sbjct: 60 NGGTTTTTTGR-NKNSVAVPQKKKGGFGGLFAK 91 >ref|XP_002313390.1| predicted protein [Populus trichocarpa] gi|222849798|gb|EEE87345.1| predicted protein [Populus trichocarpa] Length = 90 Score = 100 bits (248), Expect = 3e-19 Identities = 54/92 (58%), Positives = 64/92 (69%), Gaps = 2/92 (2%) Frame = -2 Query: 466 MASFTIAFTPATGRVFAATAAKNTGGSKQEKGLIDWILGGMQKEDQFFETDPILQKAEDK 287 MAS I F + RV+AATA+ GGSK+EKGL+DWILG +QKEDQF+ETDPIL+K E+K Sbjct: 1 MASLPIVFASPSVRVYAATAS---GGSKEEKGLLDWILGSLQKEDQFYETDPILKKVEEK 57 Query: 286 NEG--TTGRXXXXXXXXXXXKTSGFGGLFAKK 197 N G T+GR K GFGGLFAKK Sbjct: 58 NSGGTTSGRRNSVAVPQKKKKNGGFGGLFAKK 89