BLASTX nr result

ID: Coptis25_contig00021140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021140
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551305.1| PREDICTED: uncharacterized protein LOC100788...   112   8e-23
emb|CAN78614.1| hypothetical protein VITISV_028924 [Vitis vinifera]   106   4e-21
ref|XP_002280087.1| PREDICTED: uncharacterized protein LOC100265...   105   6e-21
ref|XP_003538289.1| PREDICTED: uncharacterized protein LOC100789...   104   1e-20
ref|XP_002313390.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19

>ref|XP_003551305.1| PREDICTED: uncharacterized protein LOC100788940 [Glycine max]
          Length = 92

 Score =  112 bits (279), Expect = 8e-23
 Identities = 58/91 (63%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
 Frame = -2

Query: 466 MASFTIAFTPATGRVFAATAAKNTGGSKQEKGLIDWILGGMQKEDQFFETDPILQKAEDK 287
           MAS  ++F PATGRVFAATAAK  GGSK+EKGL+DWILGG+QKEDQ  ETDPIL+K E+K
Sbjct: 1   MASIIMSFAPATGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEK 60

Query: 286 NEGTTGR--XXXXXXXXXXXKTSGFGGLFAK 200
           N GTT               K  GFGGLFAK
Sbjct: 61  NGGTTSNTGRNKNSVAVPQKKKGGFGGLFAK 91


>emb|CAN78614.1| hypothetical protein VITISV_028924 [Vitis vinifera]
          Length = 287

 Score =  106 bits (264), Expect = 4e-21
 Identities = 57/91 (62%), Positives = 66/91 (72%)
 Frame = -2

Query: 469 EMASFTIAFTPATGRVFAATAAKNTGGSKQEKGLIDWILGGMQKEDQFFETDPILQKAED 290
           +MAS TIAF PA GRVFAATA K++GGS  EKG++DWILGG+QKEDQ  ETDPIL+K E+
Sbjct: 199 KMASLTIAFAPAAGRVFAATAEKSSGGSG-EKGILDWILGGLQKEDQMLETDPILKKVEE 257

Query: 289 KNEGTTGRXXXXXXXXXXXKTSGFGGLFAKK 197
           KN G+ G            K  GFGGLFAKK
Sbjct: 258 KNGGSNG-GRKNSVVVPPKKKGGFGGLFAKK 287


>ref|XP_002280087.1| PREDICTED: uncharacterized protein LOC100265554 isoform 1 [Vitis
           vinifera]
          Length = 88

 Score =  105 bits (263), Expect = 6e-21
 Identities = 57/90 (63%), Positives = 65/90 (72%)
 Frame = -2

Query: 466 MASFTIAFTPATGRVFAATAAKNTGGSKQEKGLIDWILGGMQKEDQFFETDPILQKAEDK 287
           MAS TIAF PA GRVFAATA K++GGS  EKG++DWILGG+QKEDQ  ETDPIL+K E+K
Sbjct: 1   MASLTIAFAPAAGRVFAATAEKSSGGSG-EKGILDWILGGLQKEDQMLETDPILKKVEEK 59

Query: 286 NEGTTGRXXXXXXXXXXXKTSGFGGLFAKK 197
           N G+ G            K  GFGGLFAKK
Sbjct: 60  NGGSNG-GRKNSVVVPPKKKGGFGGLFAKK 88


>ref|XP_003538289.1| PREDICTED: uncharacterized protein LOC100789683 [Glycine max]
          Length = 92

 Score =  104 bits (260), Expect = 1e-20
 Identities = 59/93 (63%), Positives = 66/93 (70%), Gaps = 4/93 (4%)
 Frame = -2

Query: 466 MASFTIAFTPATGRVFAATAAKNTGGSKQEKGLIDWILGGMQKEDQFFETDPILQKAEDK 287
           MAS  ++F PATGRVFAATAAK  GGSK EKGL+DWI+GG+QKEDQ  ETDPIL+K E+K
Sbjct: 1   MASIIMSFAPATGRVFAATAAKGAGGSK-EKGLLDWIIGGLQKEDQLVETDPILKKVEEK 59

Query: 286 NEG----TTGRXXXXXXXXXXXKTSGFGGLFAK 200
           N G    TTGR           K  GFGGLFAK
Sbjct: 60  NGGTTTTTTGR-NKNSVAVPQKKKGGFGGLFAK 91


>ref|XP_002313390.1| predicted protein [Populus trichocarpa] gi|222849798|gb|EEE87345.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score =  100 bits (248), Expect = 3e-19
 Identities = 54/92 (58%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = -2

Query: 466 MASFTIAFTPATGRVFAATAAKNTGGSKQEKGLIDWILGGMQKEDQFFETDPILQKAEDK 287
           MAS  I F   + RV+AATA+   GGSK+EKGL+DWILG +QKEDQF+ETDPIL+K E+K
Sbjct: 1   MASLPIVFASPSVRVYAATAS---GGSKEEKGLLDWILGSLQKEDQFYETDPILKKVEEK 57

Query: 286 NEG--TTGRXXXXXXXXXXXKTSGFGGLFAKK 197
           N G  T+GR           K  GFGGLFAKK
Sbjct: 58  NSGGTTSGRRNSVAVPQKKKKNGGFGGLFAKK 89


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