BLASTX nr result

ID: Coptis25_contig00021138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021138
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543260.1| PREDICTED: uncharacterized protein LOC100786...    92   4e-17
ref|XP_003562336.1| PREDICTED: uncharacterized protein LOC100846...    92   6e-17
dbj|BAJ94190.1| predicted protein [Hordeum vulgare subsp. vulgar...    92   6e-17
gb|AFW68287.1| hypothetical protein ZEAMMB73_230689 [Zea mays]         91   7e-17
ref|XP_002466876.1| hypothetical protein SORBIDRAFT_01g015680 [S...    91   7e-17

>ref|XP_003543260.1| PREDICTED: uncharacterized protein LOC100786706 [Glycine max]
          Length = 376

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = -3

Query: 271 NWTAYEEALRENPVLAKMMISGVVYSLGDWIAQCVEGKPLFDFDWTRM 128
           NW+AYEEAL+ NPVLAKMMISG+VYSLGDWIAQCVEGKPLF+FD  RM
Sbjct: 179 NWSAYEEALKTNPVLAKMMISGIVYSLGDWIAQCVEGKPLFEFDRARM 226


>ref|XP_003562336.1| PREDICTED: uncharacterized protein LOC100846887 [Brachypodium
           distachyon]
          Length = 359

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = -3

Query: 271 NWTAYEEALRENPVLAKMMISGVVYSLGDWIAQCVEGKPLFDFDWTRM 128
           NW+AYEEAL+ NPVLAKMMISGVVYSLGDWIAQC EGKP+F+FD TRM
Sbjct: 168 NWSAYEEALKTNPVLAKMMISGVVYSLGDWIAQCYEGKPIFEFDRTRM 215


>dbj|BAJ94190.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326508638|dbj|BAJ95841.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 339

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = -3

Query: 271 NWTAYEEALRENPVLAKMMISGVVYSLGDWIAQCVEGKPLFDFDWTRM 128
           NW+AYEEAL+ NPVLAKMMISGVVYSLGDWIAQC EGKP+F+FD TRM
Sbjct: 148 NWSAYEEALKANPVLAKMMISGVVYSLGDWIAQCYEGKPIFEFDRTRM 195


>gb|AFW68287.1| hypothetical protein ZEAMMB73_230689 [Zea mays]
          Length = 294

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = -3

Query: 271 NWTAYEEALRENPVLAKMMISGVVYSLGDWIAQCVEGKPLFDFDWTRM 128
           NW+AYEEAL+ NPVLAKMMISGVVYSLGDWIAQC EGKP+FDFD  RM
Sbjct: 102 NWSAYEEALKANPVLAKMMISGVVYSLGDWIAQCYEGKPIFDFDRARM 149


>ref|XP_002466876.1| hypothetical protein SORBIDRAFT_01g015680 [Sorghum bicolor]
           gi|241920730|gb|EER93874.1| hypothetical protein
           SORBIDRAFT_01g015680 [Sorghum bicolor]
          Length = 367

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = -3

Query: 271 NWTAYEEALRENPVLAKMMISGVVYSLGDWIAQCVEGKPLFDFDWTRM 128
           NW+AYEEAL+ NPVLAKMMISGVVYSLGDWIAQC EGKP+FDFD  RM
Sbjct: 174 NWSAYEEALKANPVLAKMMISGVVYSLGDWIAQCYEGKPIFDFDRARM 221


Top