BLASTX nr result

ID: Coptis25_contig00021132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021132
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314895.1| white-brown-complex ABC transporter family [...   105   5e-21
ref|XP_002524381.1| ATP-binding cassette transporter, putative [...   104   7e-21
gb|AAG50724.1|AC079041_17 ABC transporter, putative [Arabidopsis...    99   5e-19
ref|XP_002270533.2| PREDICTED: ABC transporter G family member 1...    99   5e-19
emb|CAN70956.1| hypothetical protein VITISV_028138 [Vitis vinifera]    99   5e-19

>ref|XP_002314895.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222863935|gb|EEF01066.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 683

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/77 (62%), Positives = 61/77 (79%)
 Frame = -3

Query: 291 LKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDSRRLDLLAMVLML 112
           LKYISFSHYCYKLL+GVQYS T+ Y CG  + C+V++FPAI++LGLD+   D  A+ +ML
Sbjct: 607 LKYISFSHYCYKLLVGVQYSATEVYDCGLQMHCRVMDFPAIKYLGLDNMWWDAAALTIML 666

Query: 111 VGYRLMAYVALKNRLTH 61
           VGYRL+AYVAL+    H
Sbjct: 667 VGYRLLAYVALRMGQPH 683


>ref|XP_002524381.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223536342|gb|EEF37992.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 709

 Score =  104 bits (260), Expect = 7e-21
 Identities = 47/77 (61%), Positives = 62/77 (80%)
 Frame = -3

Query: 291 LKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDSRRLDLLAMVLML 112
           LKYISFSHYCYKLL+GVQYS  + Y C AG+ C+V++FPAI++LGLD+   D+ A+++ML
Sbjct: 633 LKYISFSHYCYKLLVGVQYSVNEVYECEAGMHCRVMDFPAIRYLGLDNMWWDVAALLIML 692

Query: 111 VGYRLMAYVALKNRLTH 61
           VGYR +AYVAL+    H
Sbjct: 693 VGYRFLAYVALRMGQPH 709


>gb|AAG50724.1|AC079041_17 ABC transporter, putative [Arabidopsis thaliana]
          Length = 646

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/71 (60%), Positives = 59/71 (83%)
 Frame = -3

Query: 291 LKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDSRRLDLLAMVLML 112
           LKY+S+S+YCYKLL+G+QY+D DYY C  GV C+V +FPAI+ +GL++  +D+  M +ML
Sbjct: 570 LKYLSYSYYCYKLLLGIQYTDDDYYECSKGVWCRVGDFPAIKSMGLNNLWIDVFVMGVML 629

Query: 111 VGYRLMAYVAL 79
           VGYRLMAY+AL
Sbjct: 630 VGYRLMAYMAL 640


>ref|XP_002270533.2| PREDICTED: ABC transporter G family member 14-like [Vitis vinifera]
           gi|296085456|emb|CBI29188.3| unnamed protein product
           [Vitis vinifera]
          Length = 657

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 42/71 (59%), Positives = 59/71 (83%)
 Frame = -3

Query: 291 LKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDSRRLDLLAMVLML 112
           LKY+S+S+YCYKLL+G+QYS+ DYY C  GV C+V++FPA++ +GL+   +D+  M LML
Sbjct: 581 LKYLSYSYYCYKLLLGIQYSEDDYYECSKGVFCRVVDFPAVKSVGLNHLWIDVCIMALML 640

Query: 111 VGYRLMAYVAL 79
           VGYRL+AY+AL
Sbjct: 641 VGYRLVAYLAL 651


>emb|CAN70956.1| hypothetical protein VITISV_028138 [Vitis vinifera]
          Length = 677

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 42/71 (59%), Positives = 59/71 (83%)
 Frame = -3

Query: 291 LKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDSRRLDLLAMVLML 112
           LKY+S+S+YCYKLL+G+QYS+ DYY C  GV C+V++FPA++ +GL+   +D+  M LML
Sbjct: 601 LKYLSYSYYCYKLLLGIQYSEDDYYECSKGVFCRVVDFPAVKSVGLNHLWIDVCIMALML 660

Query: 111 VGYRLMAYVAL 79
           VGYRL+AY+AL
Sbjct: 661 VGYRLVAYLAL 671


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