BLASTX nr result

ID: Coptis25_contig00021129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021129
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448365.1| hypothetical protein SORBIDRAFT_06g025940 [S...    75   1e-11
gb|EEE67416.1| hypothetical protein OsJ_24749 [Oryza sativa Japo...    72   6e-11
gb|EAZ04348.1| hypothetical protein OsI_26487 [Oryza sativa Indi...    72   6e-11
ref|NP_001059997.1| Os07g0563600 [Oryza sativa Japonica Group] g...    72   6e-11
ref|XP_002453403.1| hypothetical protein SORBIDRAFT_04g005390 [S...    72   1e-10

>ref|XP_002448365.1| hypothetical protein SORBIDRAFT_06g025940 [Sorghum bicolor]
           gi|241939548|gb|EES12693.1| hypothetical protein
           SORBIDRAFT_06g025940 [Sorghum bicolor]
          Length = 222

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/116 (33%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
 Frame = +3

Query: 297 NSVGSEEVDHEE----LIPKLGMLFDSVKEAYDCYNEYARLVGFSIKIKRTNKHREDHTK 464
           N V  EEV ++     +IP++GM F S  EAY+ YN YA  VGFS++  +T +H++D   
Sbjct: 75  NEVTDEEVANKARKNLIIPEVGMTFQSEDEAYNMYNTYAGKVGFSVRKSKTKRHKDD--S 132

Query: 465 IVLQTLCCFCEGAYTKVKTPTKKREERRFGCMAKFQTTLNKEGKYVLSKLIVEHTH 632
           +  + + C  +G   + +  + +++  R GC A+ Q +++KEG + + K++ EH H
Sbjct: 133 LSQKYMVCSSQG---QRENESSQKDNTRTGCNARVQFSISKEGIWTVQKVVEEHNH 185


>gb|EEE67416.1| hypothetical protein OsJ_24749 [Oryza sativa Japonica Group]
          Length = 605

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
 Frame = +3

Query: 327 EELIPKLGMLFDSVKEAYDCYNEYARLVGFSIKIKRTNKHREDHTKIVLQTLCCFCEGAY 506
           E+++PK+ MLFD  KEAYD YN YA +VGF   ++R+         I  +T  C  EG +
Sbjct: 98  EKMLPKVDMLFDGEKEAYDFYNAYAEMVGFF--VRRSTLWTTSKNIITRRTFVCSREG-F 154

Query: 507 TKVKTPTKK----REERRFGCMAKFQTTLNKEGKYVLSKLIVEHTH 632
            + K  TK+    R E R GC A     LN  GKY L++ +  H H
Sbjct: 155 REKKRGTKEAKCPRPETRIGCPASMTIRLNTNGKYRLTEFVPNHNH 200


>gb|EAZ04348.1| hypothetical protein OsI_26487 [Oryza sativa Indica Group]
          Length = 690

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
 Frame = +3

Query: 327 EELIPKLGMLFDSVKEAYDCYNEYARLVGFSIKIKRTNKHREDHTKIVLQTLCCFCEGAY 506
           E+++PK+ MLFD  KEAYD YN YA +VGF   ++R+         I  +T  C  EG +
Sbjct: 98  EKMLPKVDMLFDGEKEAYDFYNAYAEMVGFF--VRRSTLWTTSKNIITRRTFVCSREG-F 154

Query: 507 TKVKTPTKK----REERRFGCMAKFQTTLNKEGKYVLSKLIVEHTH 632
            + K  TK+    R E R GC A     LN  GKY L++ +  H H
Sbjct: 155 REKKRGTKEAKCPRPETRIGCPASMTIRLNTNGKYRLTEFVPNHNH 200


>ref|NP_001059997.1| Os07g0563600 [Oryza sativa Japonica Group]
           gi|23617207|dbj|BAC20878.1| putative far-red impaired
           response protein [Oryza sativa Japonica Group]
           gi|113611533|dbj|BAF21911.1| Os07g0563600 [Oryza sativa
           Japonica Group]
          Length = 903

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
 Frame = +3

Query: 327 EELIPKLGMLFDSVKEAYDCYNEYARLVGFSIKIKRTNKHREDHTKIVLQTLCCFCEGAY 506
           E+++PK+ MLFD  KEAYD YN YA +VGF   ++R+         I  +T  C  EG +
Sbjct: 98  EKMLPKVDMLFDGEKEAYDFYNAYAEMVGFF--VRRSTLWTTSKNIITRRTFVCSREG-F 154

Query: 507 TKVKTPTKK----REERRFGCMAKFQTTLNKEGKYVLSKLIVEHTH 632
            + K  TK+    R E R GC A     LN  GKY L++ +  H H
Sbjct: 155 REKKRGTKEAKCPRPETRIGCPASMTIRLNTNGKYRLTEFVPNHNH 200


>ref|XP_002453403.1| hypothetical protein SORBIDRAFT_04g005390 [Sorghum bicolor]
           gi|241933234|gb|EES06379.1| hypothetical protein
           SORBIDRAFT_04g005390 [Sorghum bicolor]
          Length = 429

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
 Frame = +3

Query: 297 NSVGSEEVDHEE----LIPKLGMLFDSVKEAYDCYNEYARLVGFSIKIKRTNKHREDHTK 464
           N V  EEV ++     +IP++GM F S  EAY+ YN YA  VGFS++  +T + ++D   
Sbjct: 75  NEVTDEEVANKARKNFIIPEVGMTFQSEDEAYNMYNTYAGKVGFSVRKSKTKRRKDD--S 132

Query: 465 IVLQTLCCFCEGAYTKVKTPTKKREERRFGCMAKFQTTLNKEGKYVLSKLIVEHTH 632
           +  + + C  +G   + +  + +++  R GC A+ Q +++KEG + + K++ EH H
Sbjct: 133 LSQKYMVCSSQG---QRENESSQKDNTRTGCNARVQFSISKEGIWTVQKVVEEHNH 185


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