BLASTX nr result

ID: Coptis25_contig00021124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021124
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330393.1| predicted protein [Populus trichocarpa] gi|1...    58   2e-06
ref|XP_002460857.1| hypothetical protein SORBIDRAFT_02g036400 [S...    56   8e-06

>ref|XP_002330393.1| predicted protein [Populus trichocarpa] gi|118481783|gb|ABK92830.1|
           unknown [Populus trichocarpa]
           gi|222871778|gb|EEF08909.1| predicted protein [Populus
           trichocarpa]
          Length = 99

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/84 (46%), Positives = 45/84 (53%)
 Frame = -1

Query: 680 MDISTPTVSDTPQAMDTTEVTAKDSVHGVLNRKIKKGVHMKRSKNVRKMXXXXXXXXXXX 501
           MD++ PTVSD PQAMDT+E  A+ S      RK  KG  MKRSKNVRKM           
Sbjct: 17  MDVAEPTVSDLPQAMDTSESGAQKSAPVTSVRK-TKGRPMKRSKNVRKMKAIAKAISNNE 75

Query: 500 XXXXXXXXXXXKVSRTKSAKLLYE 429
                      K +RT+SAK LYE
Sbjct: 76  ITVEKGLKKDGKTTRTQSAKKLYE 99


>ref|XP_002460857.1| hypothetical protein SORBIDRAFT_02g036400 [Sorghum bicolor]
           gi|241924234|gb|EER97378.1| hypothetical protein
           SORBIDRAFT_02g036400 [Sorghum bicolor]
          Length = 111

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
 Frame = -1

Query: 671 STPTVSDTPQAMDTTEVTAKDSVH---GVLNRKIKKGVHMKRSKNVRKMXXXXXXXXXXX 501
           +T T +D PQ MDT+E     SV    G +N+KIKKGVHMKRS+N RKM           
Sbjct: 28  ATSTATDAPQPMDTSEGKQPSSVTAALGSINKKIKKGVHMKRSQNARKMKAIARAVSKNE 87

Query: 500 XXXXXXXXXXXKVSRTKSAKLLYE 429
                      K +R +SAK LY+
Sbjct: 88  KSEEKIQKAKSKKTRVQSAKSLYD 111


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