BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021115
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   120   1e-25
ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   119   4e-25
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...   118   8e-25
ref|XP_003598441.1| F-box/kelch-repeat protein [Medicago truncat...   114   8e-24

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  120 bits (302), Expect = 1e-25
 Identities = 71/196 (36%), Positives = 104/196 (53%), Gaps = 8/196 (4%)
 Frame = -2

Query: 565 IITSILS*LPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCDDNENLYS 386
           +I  IL  LP K LL  R VSKPWC+LID PNFVKLHL  + + ++   ++     +++ 
Sbjct: 8   MIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRTTSHVHY 67

Query: 385 VDYS-----TSCTEAVEIDYPGKGSFNGVEIVGSCNGLLCIHTDFFDV-IWNPCTNEYKK 224
           +D+        C    E+++P     +G++++GS NGLLCI     D+ +WNP T +++ 
Sbjct: 68  MDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVWNPSTRKHRV 127

Query: 223 LPIAPAVAESIEDWESHITY--GFGYDSTVDDYKVVKVAFLHSGFDYEELDDDKNNEILG 50
           +P  P   +     +S   Y  GFGYDS  DDYK+V++A    G                
Sbjct: 128 VPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGG----------GKRSFE 177

Query: 49  SVVEVYSLGTNSWHRI 2
           S V+VYSL   SW RI
Sbjct: 178 SEVKVYSLRKQSWRRI 193


>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score =  120 bits (301), Expect = 2e-25
 Identities = 86/204 (42%), Positives = 115/204 (56%), Gaps = 16/204 (7%)
 Frame = -2

Query: 565 IITSILS*LPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNIS---LMVCDDNEN 395
           II  IL+ LPVKSL++F+CV KPW  LI DP FVKLHL +A E NNI+   L+V    E 
Sbjct: 8   IIVDILTYLPVKSLVRFKCVCKPWQLLISDPRFVKLHLKRAIEGNNINRQRLLVA--AEP 65

Query: 394 LY-SVDYSTS-----CTEAVEIDYPGKG----SFNGVEIVGSCNGLLCIHT--DFFDV-I 254
           LY SVD+  +         +E+ YP       SF    I GSC+GL+CI    D  D+ +
Sbjct: 66  LYSSVDFEAASDGDGINAVMELPYPSAASRTESFAFASIRGSCDGLVCIRNGGDVHDMFL 125

Query: 253 WNPCTNEYKKLPIAPAVAESIEDWESHITYGFGYDSTVDDYKVVKVAFLHSGFDYEELDD 74
           WNP T E KKLP   +  +     +     G GYDST+DDYK+V +A L +         
Sbjct: 126 WNPSTRESKKLPKPSSSVQ-----KHGFLTGLGYDSTIDDYKLV-IACLTTA-------- 171

Query: 73  DKNNEILGSVVEVYSLGTNSWHRI 2
           + +++I+    EV++L TNSW RI
Sbjct: 172 NGSHQIMAP--EVFTLKTNSWRRI 193


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  119 bits (297), Expect = 4e-25
 Identities = 74/195 (37%), Positives = 110/195 (56%), Gaps = 7/195 (3%)
 Frame = -2

Query: 565 IITSILS*LPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCDDNENLYS 386
           I   ILS LPVKSL +FRCVSK WC  ID P F+  HL ++++ +    ++  D  NL +
Sbjct: 7   ITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATNLCT 66

Query: 385 VDYSTSCTEAVEI-DYPGKGSFNGVEIVGSCNGLLC-IHTDFFDVIWNPCTNEYKKLPIA 212
           VD  +    ++E+ + P K      E++GSCNGLL  +++DF   ++NP T E K +P++
Sbjct: 67  VDLDSPDFTSIELKNNPLKSDDCATEVMGSCNGLLALLNSDFSIALYNPSTREKKMIPVS 126

Query: 211 PAVAESIEDWESHIT-----YGFGYDSTVDDYKVVKVAFLHSGFDYEELDDDKNNEILGS 47
           P    +  D +S ++     YGFG+D   +DYKVV+  F+H          D  +     
Sbjct: 127 PLELPNDLD-DSKVSSLFNFYGFGHDPINEDYKVVR--FIH-------FYGDSPDGFFHC 176

Query: 46  VVEVYSLGTNSWHRI 2
            V+VYSL +NSW RI
Sbjct: 177 EVKVYSLKSNSWKRI 191


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score =  118 bits (295), Expect = 8e-25
 Identities = 73/200 (36%), Positives = 112/200 (56%), Gaps = 12/200 (6%)
 Frame = -2

Query: 565 IITSILS*LPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCDDNENLYS 386
           I++ +L  LPVK+LL+FRC+SKP CSLID P+F+  HL+ + +  +   ++  D  NLY+
Sbjct: 8   IVSDVLLLLPVKALLRFRCLSKPLCSLIDSPDFIDHHLSHSLKTRSNLFLILRD-WNLYT 66

Query: 385 VDY----STSCTEAVEIDYP-GKGSFNGVEIVGSCNGLLCIHTDFFDV-IWNPCTNEYKK 224
           +D+    S S   A  + +P  KG   G E VGSCNGLL +     D+ ++NP T +YK+
Sbjct: 67  LDFDSLSSVSPAAADVLIHPLQKG--GGTEAVGSCNGLLALRNSERDLALYNPATRKYKR 124

Query: 223 LPIAPAVAESIEDWESHITYGFGYDSTVDDYKVVKVAFL------HSGFDYEELDDDKNN 62
           +P++            ++ YGFG+DS  +DY+++++A           FDYE        
Sbjct: 125 VPVSEIEPPDRNSKTGYVFYGFGFDSVSEDYRLIRMATFVGEDDRCESFDYE-------- 176

Query: 61  EILGSVVEVYSLGTNSWHRI 2
                 V+VYSL  +SW RI
Sbjct: 177 ----YQVQVYSLKNDSWKRI 192


>ref|XP_003598441.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487489|gb|AES68692.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 413

 Score =  114 bits (286), Expect = 8e-24
 Identities = 79/208 (37%), Positives = 112/208 (53%), Gaps = 21/208 (10%)
 Frame = -2

Query: 565 IITSILS*LPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCDD------ 404
           +I  IL  LPVK +L+FRCV K W SLI DP FVK  LN +T   NI  ++ D       
Sbjct: 48  VIPEILCRLPVKFILQFRCVCKSWNSLISDPKFVKKQLNVSTA-RNIHFLLYDHTRYLGK 106

Query: 403 ----NENLYSVDYSTSCTEAVEIDYPGKGSFNG-------VEIVGSCNGLLCIHTDF--F 263
               +E + S+ ++   + +   +Y   G FNG        + VGSCNG+LCI  D+   
Sbjct: 107 YILLSEPIDSI-FTNITSNSTRFEYSPNG-FNGDYPRSILHDFVGSCNGILCIADDYKGL 164

Query: 262 DVIWNPCTNEYKKLPI--APAVAESIEDWESHITYGFGYDSTVDDYKVVKVAFLHSGFDY 89
            ++WNP   ++K+LP+   P V   I     H+++GFGY+S+ D+YKVV V      F Y
Sbjct: 165 VILWNPSIRKFKELPLFQKPYVRNHI-----HMSFGFGYNSSKDNYKVVVVLVY---FIY 216

Query: 88  EELDDDKNNEILGSVVEVYSLGTNSWHR 5
            ++  D   E     VEV++LGTN W R
Sbjct: 217 RDIKTDIKTE-----VEVHTLGTNFWRR 239