BLASTX nr result

ID: Coptis25_contig00021091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021091
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   114   2e-24
ref|XP_004155933.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT...   111   1e-23
ref|XP_004141681.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   111   1e-23
ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   110   2e-23
ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi...   110   5e-23

>ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score =  114 bits (284), Expect(2) = 2e-24
 Identities = 52/82 (63%), Positives = 65/82 (79%)
 Frame = +3

Query: 15  KGEQADLPAHKVMVATVRCAEIANEKFADLAGKEDWRQVKKAVQTRAVSGFGKKLSSIFQ 194
           + +  DLPAHKVMVATVRC EIANEK+A     EDW Q+++AVQ+  + GFGKKLSS+  
Sbjct: 274 ENKDLDLPAHKVMVATVRCEEIANEKYASFVANEDWCQLEEAVQSGPIPGFGKKLSSLLD 333

Query: 195 TCLSEYDKEATYFDEGVRTTER 260
           TC SEYD EATYFDEGVR++++
Sbjct: 334 TCFSEYDAEATYFDEGVRSSKQ 355



 Score = 23.5 bits (49), Expect(2) = 2e-24
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 1   IWKVIKENK 27
           IWKVIKENK
Sbjct: 268 IWKVIKENK 276


>ref|XP_004155933.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT HAIR DEFECTIVE 3
           homolog 1-like [Cucumis sativus]
          Length = 818

 Score =  111 bits (277), Expect(2) = 1e-23
 Identities = 53/82 (64%), Positives = 62/82 (75%)
 Frame = +3

Query: 15  KGEQADLPAHKVMVATVRCAEIANEKFADLAGKEDWRQVKKAVQTRAVSGFGKKLSSIFQ 194
           + +  DLPAHKVMVATVRC EI NEKF   A  EDW  +++ VQ+  V GFGKKLSSI  
Sbjct: 274 ENKDLDLPAHKVMVATVRCEEIGNEKFTWFASNEDWLSLEEEVQSGPVQGFGKKLSSIID 333

Query: 195 TCLSEYDKEATYFDEGVRTTER 260
           TCLSEYD EAT+FDEGVR+ +R
Sbjct: 334 TCLSEYDAEATFFDEGVRSAKR 355



 Score = 23.5 bits (49), Expect(2) = 1e-23
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 1   IWKVIKENK 27
           IWKVIKENK
Sbjct: 268 IWKVIKENK 276


>ref|XP_004141681.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Cucumis
           sativus]
          Length = 818

 Score =  111 bits (277), Expect(2) = 1e-23
 Identities = 53/82 (64%), Positives = 62/82 (75%)
 Frame = +3

Query: 15  KGEQADLPAHKVMVATVRCAEIANEKFADLAGKEDWRQVKKAVQTRAVSGFGKKLSSIFQ 194
           + +  DLPAHKVMVATVRC EI NEKF   A  EDW  +++ VQ+  V GFGKKLSSI  
Sbjct: 274 ENKDLDLPAHKVMVATVRCEEIGNEKFTWFASNEDWLSLEEEVQSGPVQGFGKKLSSIID 333

Query: 195 TCLSEYDKEATYFDEGVRTTER 260
           TCLSEYD EAT+FDEGVR+ +R
Sbjct: 334 TCLSEYDAEATFFDEGVRSAKR 355



 Score = 23.5 bits (49), Expect(2) = 1e-23
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 1   IWKVIKENK 27
           IWKVIKENK
Sbjct: 268 IWKVIKENK 276


>ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score =  110 bits (274), Expect(2) = 2e-23
 Identities = 50/82 (60%), Positives = 63/82 (76%)
 Frame = +3

Query: 15  KGEQADLPAHKVMVATVRCAEIANEKFADLAGKEDWRQVKKAVQTRAVSGFGKKLSSIFQ 194
           + +  DLPAHKVMVATVRC EIANEK+      EDW Q+++AVQ+  + GFGKKLSS+  
Sbjct: 274 ENKDLDLPAHKVMVATVRCEEIANEKYVSFVANEDWCQLEEAVQSGPIPGFGKKLSSLLD 333

Query: 195 TCLSEYDKEATYFDEGVRTTER 260
            C SEYD EATYFDEGVR++++
Sbjct: 334 ICFSEYDAEATYFDEGVRSSKQ 355



 Score = 23.5 bits (49), Expect(2) = 2e-23
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 1   IWKVIKENK 27
           IWKVIKENK
Sbjct: 268 IWKVIKENK 276


>ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis]
           gi|223533215|gb|EEF34971.1| Protein SEY1, putative
           [Ricinus communis]
          Length = 813

 Score =  110 bits (274), Expect(2) = 5e-23
 Identities = 52/82 (63%), Positives = 63/82 (76%)
 Frame = +3

Query: 15  KGEQADLPAHKVMVATVRCAEIANEKFADLAGKEDWRQVKKAVQTRAVSGFGKKLSSIFQ 194
           + +  DLPAHKVMVATVRC EIANEK+A+    E+W Q+++AVQ+  VSGFGKKLSS   
Sbjct: 274 ENKDLDLPAHKVMVATVRCEEIANEKYANFTTNEEWHQIEEAVQSGPVSGFGKKLSSTLS 333

Query: 195 TCLSEYDKEATYFDEGVRTTER 260
           T  SEYD EA YFDEGVR+ +R
Sbjct: 334 TSFSEYDAEAIYFDEGVRSAKR 355



 Score = 22.3 bits (46), Expect(2) = 5e-23
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 1   IWKVIKENK 27
           +WKVIKENK
Sbjct: 268 MWKVIKENK 276


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