BLASTX nr result
ID: Coptis25_contig00021086
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00021086
(934 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays] 362 7e-98
ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [S... 358 8e-97
ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group] g... 354 2e-95
gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indi... 353 3e-95
ref|XP_003572610.1| PREDICTED: pentatricopeptide repeat-containi... 349 6e-94
>gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 362 bits (929), Expect = 7e-98
Identities = 181/314 (57%), Positives = 230/314 (73%), Gaps = 3/314 (0%)
Frame = -2
Query: 933 HGQVFKNGVEENVIVRNSIMKMYCNMGCLIEARLLFD--GSLNLDLISWNSMISAYGKSG 760
HGQ K+G + +V N ++K+YC +G L +AR +FD G+ +LD SWN+M+S YGK G
Sbjct: 139 HGQALKHGALAHPVVTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNTMVSGYGKCG 198
Query: 759 QVELGRELFERMPERSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPDAMTLVSVLK 580
+E RE+F RMPER LVSW AMID + +G FSEAL +FD M +G +PDA+ L SVLK
Sbjct: 199 DLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPDAVVLSSVLK 258
Query: 579 ASCNLGALDKGKWVHRYVDENKLGWEK-NVVLGTALVDMYAKCGCIDVALELFDRIKDKD 403
A +LGAL++G+WVHR++ LG NV+L TALVDMY KCGC+D A +FD ++ +D
Sbjct: 259 ACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVFDGVQSQD 318
Query: 402 VVLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPTTFVTVLSACAHSGMVAEGIEIFK 223
VVLWNAMI GLA++GHG+ ALEL+ M G +PN +TFV VL AC H+G V EG EIF+
Sbjct: 319 VVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGRVDEGKEIFR 378
Query: 222 TMKANGIEPGIEHYGCLADIFGRAGRVQEAEENLFNMPMEPQASQLGALMAACRKHNNVE 43
+M +GIEP EHYGCLAD+ GRAG ++EAE L +MPMEP ASQ GALM++C HNNV
Sbjct: 379 SMCDHGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHNNVG 438
Query: 42 VGERVGKCLISLEP 1
VGERVGK LI LEP
Sbjct: 439 VGERVGKKLIELEP 452
>ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein
SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 358 bits (920), Expect = 8e-97
Identities = 178/314 (56%), Positives = 230/314 (73%), Gaps = 3/314 (0%)
Frame = -2
Query: 933 HGQVFKNGVEENVIVRNSIMKMYCNMGCLIEARLLFD--GSLNLDLISWNSMISAYGKSG 760
H Q K G + +V N ++K+YC +G L +AR +FD G+ LD++SWN+M+S YGK G
Sbjct: 104 HAQALKCGALAHPVVTNCLLKLYCALGMLPDARRVFDTSGATALDVVSWNTMVSGYGKCG 163
Query: 759 QVELGRELFERMPERSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPDAMTLVSVLK 580
+E RE+F RMPER LVSW AMID V +G FSEAL +FD M +G KPDA+ LVSVLK
Sbjct: 164 DLEAAREVFVRMPERGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGFKPDAVVLVSVLK 223
Query: 579 ASCNLGALDKGKWVHRYVDENKLGWEK-NVVLGTALVDMYAKCGCIDVALELFDRIKDKD 403
+LGAL++G+WVHR++ +LG NV+L TALVDMY KCGC++ A +FD ++ D
Sbjct: 224 TCAHLGALERGRWVHRFLKAERLGGRPGNVMLETALVDMYCKCGCMNEAWWVFDGVQSHD 283
Query: 402 VVLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPTTFVTVLSACAHSGMVAEGIEIFK 223
VVLWNAMI GLA++GHG+ ALEL+ M +G +PN +TFV L AC H+G V EG ++F+
Sbjct: 284 VVLWNAMIGGLAMNGHGKRALELFRRMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFR 343
Query: 222 TMKANGIEPGIEHYGCLADIFGRAGRVQEAEENLFNMPMEPQASQLGALMAACRKHNNVE 43
+M+ +GIEP EHYGCLAD+ GRAG ++EAE L +MPMEP ASQ GALM++C HNNV
Sbjct: 344 SMRDHGIEPRREHYGCLADLLGRAGLLEEAEGVLLDMPMEPHASQWGALMSSCLMHNNVG 403
Query: 42 VGERVGKCLISLEP 1
VGERVGK LI LEP
Sbjct: 404 VGERVGKKLIELEP 417
>ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza
sativa Japonica Group] gi|125582482|gb|EAZ23413.1|
hypothetical protein OsJ_07107 [Oryza sativa Japonica
Group] gi|215712305|dbj|BAG94432.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 586
Score = 354 bits (908), Expect = 2e-95
Identities = 171/313 (54%), Positives = 229/313 (73%), Gaps = 2/313 (0%)
Frame = -2
Query: 933 HGQVFKNGVEENVIVRNSIMKMYCNMGCLIEAR-LLFDGSLNLDLISWNSMISAYGKSGQ 757
H Q FK G + +V NS++K+YC++G L AR +L+ G LD++SWN+M+S YGK G
Sbjct: 101 HAQAFKCGALAHPVVTNSLLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGD 160
Query: 756 VELGRELFERMPERSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPDAMTLVSVLKA 577
+ RE+F RMPER+LVSW AM+D V +G F EAL +FD M +PD + LVSVLKA
Sbjct: 161 LGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKA 220
Query: 576 SCNLGALDKGKWVHRYVDENKLGWEK-NVVLGTALVDMYAKCGCIDVALELFDRIKDKDV 400
+LGA+++G+WVHRY++ G + N++L TALVDMY KCGC++ A ++FD + +DV
Sbjct: 221 CAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDV 280
Query: 399 VLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPTTFVTVLSACAHSGMVAEGIEIFKT 220
VLWNAMI GLA++G+G ALEL+ M ++G MPN +TF+ VL AC H+G V EG +FK+
Sbjct: 281 VLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKS 340
Query: 219 MKANGIEPGIEHYGCLADIFGRAGRVQEAEENLFNMPMEPQASQLGALMAACRKHNNVEV 40
M+ GI+P EHYGCLAD+ GRAG V+EAE L +MPMEP ASQ GALM++C+ HN++ V
Sbjct: 341 MQDYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINV 400
Query: 39 GERVGKCLISLEP 1
GERVGK LI LEP
Sbjct: 401 GERVGKRLIELEP 413
>gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 353 bits (906), Expect = 3e-95
Identities = 170/313 (54%), Positives = 229/313 (73%), Gaps = 2/313 (0%)
Frame = -2
Query: 933 HGQVFKNGVEENVIVRNSIMKMYCNMGCLIEAR-LLFDGSLNLDLISWNSMISAYGKSGQ 757
H Q FK G + +V NS++K+YC++G + AR +L+ G LD++SWN+M+S YGK G
Sbjct: 101 HAQAFKCGALAHPVVTNSLLKLYCSLGLIDRARRVLYSGGAALDVVSWNTMVSGYGKGGD 160
Query: 756 VELGRELFERMPERSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPDAMTLVSVLKA 577
+ RE+F RMPER+LVSW AM+D V +G F EAL +FD M +PD + LVSVLKA
Sbjct: 161 LGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKA 220
Query: 576 SCNLGALDKGKWVHRYVDENKLGWEK-NVVLGTALVDMYAKCGCIDVALELFDRIKDKDV 400
+LGA+++G+WVHRY++ G + N++L TALVDMY KCGC++ A ++FD + +DV
Sbjct: 221 CAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDV 280
Query: 399 VLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPTTFVTVLSACAHSGMVAEGIEIFKT 220
VLWNAMI GLA++G+G ALEL+ M ++G MPN +TF+ VL AC H+G V EG +FK+
Sbjct: 281 VLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKS 340
Query: 219 MKANGIEPGIEHYGCLADIFGRAGRVQEAEENLFNMPMEPQASQLGALMAACRKHNNVEV 40
M+ GI+P EHYGCLAD+ GRAG V+EAE L +MPMEP ASQ GALM++C+ HN++ V
Sbjct: 341 MQDYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINV 400
Query: 39 GERVGKCLISLEP 1
GERVGK LI LEP
Sbjct: 401 GERVGKRLIELEP 413
>ref|XP_003572610.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540-like
[Brachypodium distachyon]
Length = 454
Score = 349 bits (895), Expect = 6e-94
Identities = 173/312 (55%), Positives = 223/312 (71%), Gaps = 1/312 (0%)
Frame = -2
Query: 933 HGQVFKNGVEENVIVRNSIMKMYCNMGCLIEARLLFDGSLNLDLISWNSMISAYGKSGQV 754
H Q K G + +V NS++K+YC +G L AR +FD LD+ SWN+M+S YGKSG +
Sbjct: 99 HAQALKCGALAHSVVTNSLLKLYCTLGLLPHARRVFDSGAALDVASWNTMVSGYGKSGDL 158
Query: 753 ELGRELFERMPERSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPDAMTLVSVLKAS 574
RE+F RMP R+LVSW AMID V + F EALS+FD M G KPD + LVS+LKA
Sbjct: 159 AAAREVFGRMPGRNLVSWSAMIDALVHAEEFGEALSVFDQMMREGFKPDVVVLVSMLKAC 218
Query: 573 CNLGALDKGKWVHRYVD-ENKLGWEKNVVLGTALVDMYAKCGCIDVALELFDRIKDKDVV 397
+LGA+ +G+W H+Y++ E G ++NV++ TALVDMY KCGC++ A +FD ++ +DVV
Sbjct: 219 AHLGAVKRGRWAHQYLETEGFAGRQRNVMVETALVDMYCKCGCMEEAWCVFDGVRYRDVV 278
Query: 396 LWNAMISGLALHGHGRDALELYFTMRRRGTMPNPTTFVTVLSACAHSGMVAEGIEIFKTM 217
LWN+MI GLA++GHG ALEL+ M + G +PN +TF L AC H+G V EG EIFK+M
Sbjct: 279 LWNSMIGGLAMNGHGDRALELFQRMLQEGFVPNQSTFAGALCACTHTGHVDEGREIFKSM 338
Query: 216 KANGIEPGIEHYGCLADIFGRAGRVQEAEENLFNMPMEPQASQLGALMAACRKHNNVEVG 37
+GIEP EHYGCLAD+ GRAGRV EAE L +MPMEP ASQ GALM +C+ HN++ VG
Sbjct: 339 WHHGIEPQREHYGCLADLLGRAGRVGEAEAVLLDMPMEPHASQWGALMLSCQMHNDITVG 398
Query: 36 ERVGKCLISLEP 1
ERVGK LI LEP
Sbjct: 399 ERVGKRLIELEP 410