BLASTX nr result

ID: Coptis25_contig00021084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021084
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...    71   1e-10
emb|CBI19420.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002302416.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206...    69   3e-10
ref|XP_002510115.1| transcription initiation factor, putative [R...    69   5e-10

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +1

Query: 157 MDPNIMKILEDDEDDTMHSGADVDAFTAALNRDIEGDPSS 276
           MDP+IMK+LE+DED+TMHSGADV+A TAALNRDIEGD S+
Sbjct: 1   MDPSIMKLLEEDEDETMHSGADVEALTAALNRDIEGDTST 40


>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +1

Query: 157 MDPNIMKILEDDEDDTMHSGADVDAFTAALNRDIEGDPSS 276
           MDP+IMK+LE+DED+TMHSGADV+A TAALNRDIEGD S+
Sbjct: 1   MDPSIMKLLEEDEDETMHSGADVEALTAALNRDIEGDTST 40


>ref|XP_002302416.1| predicted protein [Populus trichocarpa] gi|222844142|gb|EEE81689.1|
           predicted protein [Populus trichocarpa]
          Length = 64

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 37/40 (92%)
 Frame = +1

Query: 157 MDPNIMKILEDDEDDTMHSGADVDAFTAALNRDIEGDPSS 276
           MDPNIMK+LE+DED+TMHSGADV+AF AALNRDI GD S+
Sbjct: 1   MDPNIMKLLEEDEDETMHSGADVEAFQAALNRDIGGDVST 40


>ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206316 [Cucumis sativus]
           gi|449521952|ref|XP_004167993.1| PREDICTED:
           uncharacterized LOC101206316 [Cucumis sativus]
          Length = 898

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/45 (71%), Positives = 39/45 (86%)
 Frame = +1

Query: 157 MDPNIMKILEDDEDDTMHSGADVDAFTAALNRDIEGDPSSQSDTT 291
           MDP+IMK+LEDDED++MHSGA VDAF AALNRDIEGD  + + T+
Sbjct: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDVQAVAQTS 45


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
           gi|223550816|gb|EEF52302.1| transcription initiation
           factor, putative [Ricinus communis]
          Length = 925

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/47 (72%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
 Frame = +1

Query: 157 MDPNIMKILEDDEDDTMHSGADVDAFTAALNRDIEGDPS-SQSDTTG 294
           MDP+IMK+LE+DED++MHSGADV+AF AALNRDI GD S SQ   TG
Sbjct: 1   MDPSIMKLLEEDEDESMHSGADVEAFQAALNRDIGGDASTSQPSDTG 47


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