BLASTX nr result

ID: Coptis25_contig00021081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021081
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277493.2| PREDICTED: uncharacterized protein LOC100249...   394   e-107
ref|XP_004142857.1| PREDICTED: uncharacterized protein LOC101219...   363   4e-98
ref|XP_002326145.1| predicted protein [Populus trichocarpa] gi|2...   363   4e-98
ref|XP_004162301.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   362   6e-98
ref|XP_002516212.1| conserved hypothetical protein [Ricinus comm...   362   1e-97

>ref|XP_002277493.2| PREDICTED: uncharacterized protein LOC100249222 [Vitis vinifera]
          Length = 1747

 Score =  394 bits (1012), Expect = e-107
 Identities = 198/274 (72%), Positives = 223/274 (81%), Gaps = 5/274 (1%)
 Frame = -3

Query: 809 ISCQFGPFENISFPSLNSLQLIIPPLSLASGVTLYLSSRNKPKRNPDIYDLGEWILFTSP 630
           I+ + G  E+I FPS+NSL L+ P L  ASGV LYLS      R+ +  D+GEWILFTSP
Sbjct: 8   INSKSGGPESIRFPSVNSLDLVAPALGFASGVALYLSRF----RSGEDSDIGEWILFTSP 63

Query: 629 TPFNRFVFLRCPSIKFKGSELLEDLNEKLVKEDRHFI---SGRIQ--GKDGKVESFEEKL 465
           TPFNRFV LRCPSI F+GSELLED+NE+LVKEDRHF+   SGRIQ  G DG+    EEKL
Sbjct: 64  TPFNRFVLLRCPSISFEGSELLEDVNERLVKEDRHFVRLNSGRIQVRGYDGRDAIVEEKL 123

Query: 464 VYQRICLGTSDGGVISLDWPRNLDLREEHGMDTTVVLVPGTAEGSMDKNVRLFVCELLKR 285
            YQR C+G  DGGV+SLDWP NLDL EEHG+DTTV+L+PGTAEGSMD NVR FVCE L R
Sbjct: 124 AYQRECVGMDDGGVVSLDWPANLDLTEEHGLDTTVLLIPGTAEGSMDPNVRSFVCEALWR 183

Query: 284 GCFPIVMNPRGCAGSPLTTPRLFTAADSNDICTAIQFINKARPWNTLMAVGWGNGANMVT 105
           G FP+VMNPRGCAGSPLTT RLFTAADS+DICTAIQFIN+ARPW T+M VGWG GANM+T
Sbjct: 184 GYFPVVMNPRGCAGSPLTTARLFTAADSDDICTAIQFINRARPWTTMMGVGWGYGANMLT 243

Query: 104 KYLAEVEERTPLTAATCIDNPFDLEEATRSFPYH 3
           KYLAEV E+TPLTAATCIDNPFDLEEA+R  P H
Sbjct: 244 KYLAEVGEKTPLTAATCIDNPFDLEEASRVAPNH 277


>ref|XP_004142857.1| PREDICTED: uncharacterized protein LOC101219570 [Cucumis sativus]
          Length = 1789

 Score =  363 bits (931), Expect = 4e-98
 Identities = 189/311 (60%), Positives = 230/311 (73%), Gaps = 22/311 (7%)
 Frame = -3

Query: 869 PLYTSRTHDFRIRKQRRL-----------IFISCQFGPFENI------SFPSLNSLQLII 741
           P+      +FR+ ++RRL             I  Q  PFE++         ++NSL+LI 
Sbjct: 19  PINPLHVREFRVFRRRRLKHYRHGHHRTDFTIRSQSNPFESLFHNLVSQVTTVNSLELIA 78

Query: 740 PPLSLASGVTLYLSSRNKPKRNPDIYDLGEWILFTSPTPFNRFVFLRCPSIKFKGSE--L 567
           P L  +SGV LYLS+    K N  + D+GEWI   SPTPFNRFVFLRCPSI F GS+  L
Sbjct: 79  PALGFSSGVALYLSNVVSSK-NSALSDIGEWIFLCSPTPFNRFVFLRCPSIAFPGSDTNL 137

Query: 566 LEDLNEKLVKEDRHFI---SGRIQGKDGKVESFEEKLVYQRICLGTSDGGVISLDWPRNL 396
           +ED++E+LVKE RHF+   SGR++   G+ E  E+KL YQR+C+ T DGGVISLDWP +L
Sbjct: 138 VEDVSERLVKEGRHFVRLNSGRMKATTGEDEK-EDKLTYQRLCISTEDGGVISLDWPSHL 196

Query: 395 DLREEHGMDTTVVLVPGTAEGSMDKNVRLFVCELLKRGCFPIVMNPRGCAGSPLTTPRLF 216
           +LREEHG+DTT++LVPGT EGSMD+NVRL V E L RG FPIVMNPRGCAGSPLTT RLF
Sbjct: 197 NLREEHGLDTTLLLVPGTPEGSMDRNVRLSVIEALGRGLFPIVMNPRGCAGSPLTTARLF 256

Query: 215 TAADSNDICTAIQFINKARPWNTLMAVGWGNGANMVTKYLAEVEERTPLTAATCIDNPFD 36
           +AADS+DI TA+QF++KARPW  LMA+GWG GANM+TKYLAEV ERTPLTAA CIDNPFD
Sbjct: 257 SAADSDDIYTAVQFVSKARPWTALMAIGWGYGANMLTKYLAEVGERTPLTAAACIDNPFD 316

Query: 35  LEEATRSFPYH 3
           LEEAT++ PYH
Sbjct: 317 LEEATQTPPYH 327


>ref|XP_002326145.1| predicted protein [Populus trichocarpa] gi|222833338|gb|EEE71815.1|
           predicted protein [Populus trichocarpa]
          Length = 1852

 Score =  363 bits (931), Expect = 4e-98
 Identities = 191/308 (62%), Positives = 231/308 (75%), Gaps = 9/308 (2%)
 Frame = -3

Query: 899 PNYTNVHLQSPLYTSRT-HDFRIRKQRRLIFISCQFG---PFENI--SFPSLNSLQLIIP 738
           P   N H   P ++ +  + FR  K+RRL   S       PF+N+   FPS N+  ++ P
Sbjct: 10  PQLLNPH---PFFSPKNPYQFRSYKRRRLKPCSSSSNFLEPFKNLLSQFPSPNTPDILAP 66

Query: 737 PLSLASGVTLYLSSRNKPKRNPDIYDLGEWILFTSPTPFNRFVFLRCPSIKFKGSELLED 558
            L LASG+TLYLS  NK  ++ +I   GEWILF+SPTPFNRFV LRCPSI F+GSE +E+
Sbjct: 67  ALGLASGLTLYLSQSNKFSKSSNI---GEWILFSSPTPFNRFVILRCPSISFEGSEFIEN 123

Query: 557 LNEKLVKEDRHFI---SGRIQGKDGKVESFEEKLVYQRICLGTSDGGVISLDWPRNLDLR 387
           +N+KLVKEDRHF+   SG+I    G+  S   KL +QR+C+ T DGGVISLDWP +L+L 
Sbjct: 124 VNDKLVKEDRHFVRLNSGKIGV--GRESSEGLKLEFQRVCVNTEDGGVISLDWPADLELE 181

Query: 386 EEHGMDTTVVLVPGTAEGSMDKNVRLFVCELLKRGCFPIVMNPRGCAGSPLTTPRLFTAA 207
           EEHG+DTT++LVPGTA+GS + NVR FV + LKRG FP+VMNPRGCA SP+TT RLFTAA
Sbjct: 182 EEHGLDTTLLLVPGTAKGSSEDNVRFFVVDALKRGFFPVVMNPRGCAASPITTARLFTAA 241

Query: 206 DSNDICTAIQFINKARPWNTLMAVGWGNGANMVTKYLAEVEERTPLTAATCIDNPFDLEE 27
           DS+DI TAIQFI+KARPW TLM VGWG GANM+TKYLAEV E TPLTAATCI+NPFDLEE
Sbjct: 242 DSDDISTAIQFISKARPWTTLMGVGWGYGANMLTKYLAEVGECTPLTAATCINNPFDLEE 301

Query: 26  ATRSFPYH 3
           ATR  PYH
Sbjct: 302 ATRCSPYH 309


>ref|XP_004162301.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229461 [Cucumis sativus]
          Length = 1766

 Score =  362 bits (930), Expect = 6e-98
 Identities = 189/311 (60%), Positives = 230/311 (73%), Gaps = 22/311 (7%)
 Frame = -3

Query: 869 PLYTSRTHDFRIRKQRRL-----------IFISCQFGPFENI------SFPSLNSLQLII 741
           P+      +FR+ ++RRL             I  Q  PFE++         ++NSL+LI 
Sbjct: 19  PINPLHVREFRVFRRRRLKHYRHGHHRTDFTIRSQSNPFESLFHNLVSQVTTVNSLELIA 78

Query: 740 PPLSLASGVTLYLSSRNKPKRNPDIYDLGEWILFTSPTPFNRFVFLRCPSIKFKGSE--L 567
           P L  +SGV LYLS+    K N  + D+GEWI   SPTPFNRFVFLRCPSI F GS+  L
Sbjct: 79  PALGFSSGVALYLSNVVSSK-NSALSDIGEWIXLCSPTPFNRFVFLRCPSIAFPGSDTNL 137

Query: 566 LEDLNEKLVKEDRHFI---SGRIQGKDGKVESFEEKLVYQRICLGTSDGGVISLDWPRNL 396
           +ED++E+LVKE RHF+   SGR++   G+ E  E+KL YQR+C+ T DGGVISLDWP +L
Sbjct: 138 VEDVSERLVKEGRHFVRLNSGRMKATTGEDEK-EDKLTYQRLCISTEDGGVISLDWPSHL 196

Query: 395 DLREEHGMDTTVVLVPGTAEGSMDKNVRLFVCELLKRGCFPIVMNPRGCAGSPLTTPRLF 216
           +LREEHG+DTT++LVPGT EGSMD+NVRL V E L RG FPIVMNPRGCAGSPLTT RLF
Sbjct: 197 NLREEHGLDTTLLLVPGTPEGSMDRNVRLSVIEALGRGLFPIVMNPRGCAGSPLTTARLF 256

Query: 215 TAADSNDICTAIQFINKARPWNTLMAVGWGNGANMVTKYLAEVEERTPLTAATCIDNPFD 36
           +AADS+DI TA+QF++KARPW  LMA+GWG GANM+TKYLAEV ERTPLTAA CIDNPFD
Sbjct: 257 SAADSDDIYTAVQFVSKARPWTALMAIGWGYGANMLTKYLAEVGERTPLTAAACIDNPFD 316

Query: 35  LEEATRSFPYH 3
           LEEAT++ PYH
Sbjct: 317 LEEATQTPPYH 327


>ref|XP_002516212.1| conserved hypothetical protein [Ricinus communis]
           gi|223544698|gb|EEF46214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1731

 Score =  362 bits (928), Expect = 1e-97
 Identities = 187/313 (59%), Positives = 225/313 (71%), Gaps = 11/313 (3%)
 Frame = -3

Query: 908 LSTPNYTNVHLQSPLYTSRTHDFRIRKQRRLIFISCQ--FGPFENI--SFPSLNSLQLII 741
           L  P +  +H + P        +R R+ +R   IS      PF      FPS NSL  + 
Sbjct: 8   LKPPQHLLLHSRYPFQIRHFRFYRRRRIKRTACISSNNLLEPFRYFLSQFPSQNSLDFLA 67

Query: 740 PPLSLASGVTLYLSSRNKPKRNPDIY---DLGEWILFTSPTPFNRFVFLRCPSIKFKGSE 570
           P L LASG+TLYLS       N +     ++GEWILF SPTPFNRFVFLRCPSI  +G  
Sbjct: 68  PILGLASGLTLYLSQSKSTNPNSNSLINSNIGEWILFASPTPFNRFVFLRCPSISLEG-- 125

Query: 569 LLEDLNEKLVKEDRHFIS---GRIQGKDGKVESF-EEKLVYQRICLGTSDGGVISLDWPR 402
            LE+++E+ ++EDRHF+    GRI+ ++  +    EEKL YQR+C+ T DGGVISLDWP 
Sbjct: 126 -LENVSERFLEEDRHFVRLSRGRIEARESGIGGIIEEKLEYQRVCVSTEDGGVISLDWPA 184

Query: 401 NLDLREEHGMDTTVVLVPGTAEGSMDKNVRLFVCELLKRGCFPIVMNPRGCAGSPLTTPR 222
           NL+LREEHG+DTT++LVPGT EGSM +NVR FVC+ L RG FP+V+NPRGCA SPLTT R
Sbjct: 185 NLELREEHGLDTTLLLVPGTTEGSMCENVRDFVCDALMRGFFPVVLNPRGCARSPLTTAR 244

Query: 221 LFTAADSNDICTAIQFINKARPWNTLMAVGWGNGANMVTKYLAEVEERTPLTAATCIDNP 42
           LFTAADS+DICTAI FINKARPW TLM VGWG GANM+TKYLAEV +RTPLTAATCI+NP
Sbjct: 245 LFTAADSDDICTAIHFINKARPWTTLMGVGWGYGANMLTKYLAEVGDRTPLTAATCINNP 304

Query: 41  FDLEEATRSFPYH 3
           FDLEE T+S PYH
Sbjct: 305 FDLEEVTKSSPYH 317


Top