BLASTX nr result

ID: Coptis25_contig00021075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021075
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278252.1| PREDICTED: glycine cleavage system H protein...   181   4e-44
ref|XP_002528162.1| glycine cleavage system h protein, putative ...   181   6e-44
ref|XP_002269090.1| PREDICTED: glycine cleavage system H protein...   181   7e-44
gb|AFK36203.1| unknown [Lotus japonicus]                              179   2e-43
ref|XP_002321819.1| precursor of carboxylase h-protein 2, glycin...   179   3e-43

>ref|XP_002278252.1| PREDICTED: glycine cleavage system H protein, mitochondrial [Vitis
           vinifera] gi|297737954|emb|CBI27155.3| unnamed protein
           product [Vitis vinifera]
          Length = 154

 Score =  181 bits (460), Expect = 4e-44
 Identities = 87/106 (82%), Positives = 97/106 (91%)
 Frame = -1

Query: 318 FASVVKELKYCNSHEWVKADGNSATVGITDHAQDHLGDVVYVELPEVGDVVTQGNQFGSV 139
           F+SVVK+LKY +SHEWVK DGNSA VGITDHAQDHLGDVVYVELPE G  V QG+ FG+V
Sbjct: 23  FSSVVKDLKYADSHEWVKIDGNSAIVGITDHAQDHLGDVVYVELPEAGAAVNQGSGFGAV 82

Query: 138 ESVKATSDINSPISGKVVEVNEELSSSPGLVNASPFKKGWMIKVEM 1
           ESVKATSDINSP+SGKVVEVNEEL+SSPGLVNASP++ GW+IKVEM
Sbjct: 83  ESVKATSDINSPVSGKVVEVNEELNSSPGLVNASPYENGWIIKVEM 128


>ref|XP_002528162.1| glycine cleavage system h protein, putative [Ricinus communis]
           gi|223532419|gb|EEF34213.1| glycine cleavage system h
           protein, putative [Ricinus communis]
          Length = 142

 Score =  181 bits (459), Expect = 6e-44
 Identities = 85/104 (81%), Positives = 96/104 (92%)
 Frame = -1

Query: 312 SVVKELKYCNSHEWVKADGNSATVGITDHAQDHLGDVVYVELPEVGDVVTQGNQFGSVES 133
           ++VK+LKY +SHEWVK DGNSATVGITDHAQDHLGDVVYVELPEVG  VTQGN FG+VES
Sbjct: 14  AIVKDLKYADSHEWVKVDGNSATVGITDHAQDHLGDVVYVELPEVGAAVTQGNSFGAVES 73

Query: 132 VKATSDINSPISGKVVEVNEELSSSPGLVNASPFKKGWMIKVEM 1
           VKATSDINSP+SGKVVEVNEEL+ SPGLVN+SP+ KGW+IKV +
Sbjct: 74  VKATSDINSPVSGKVVEVNEELNGSPGLVNSSPYDKGWIIKVNI 117


>ref|XP_002269090.1| PREDICTED: glycine cleavage system H protein, mitochondrial [Vitis
           vinifera] gi|296087512|emb|CBI34101.3| unnamed protein
           product [Vitis vinifera]
          Length = 155

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/106 (81%), Positives = 97/106 (91%)
 Frame = -1

Query: 318 FASVVKELKYCNSHEWVKADGNSATVGITDHAQDHLGDVVYVELPEVGDVVTQGNQFGSV 139
           F+SVVK+LKY +SHEW K DGN AT+GITDHAQDHLGDVVYVELPEVG  V+QG  FG+V
Sbjct: 24  FSSVVKDLKYVDSHEWAKVDGNLATIGITDHAQDHLGDVVYVELPEVGANVSQGGSFGAV 83

Query: 138 ESVKATSDINSPISGKVVEVNEELSSSPGLVNASPFKKGWMIKVEM 1
           ESVKATSDINSP+SGKVVEVNEELSSSPGLVN SP++KGW+IKVE+
Sbjct: 84  ESVKATSDINSPVSGKVVEVNEELSSSPGLVNGSPYEKGWIIKVEI 129


>gb|AFK36203.1| unknown [Lotus japonicus]
          Length = 155

 Score =  179 bits (455), Expect = 2e-43
 Identities = 86/106 (81%), Positives = 97/106 (91%)
 Frame = -1

Query: 318 FASVVKELKYCNSHEWVKADGNSATVGITDHAQDHLGDVVYVELPEVGDVVTQGNQFGSV 139
           F+SVVK+LKY +SHEWVK DGNSATVGITDHAQDHLGDVVYVELPEVG  VTQG  FG+V
Sbjct: 24  FSSVVKDLKYADSHEWVKVDGNSATVGITDHAQDHLGDVVYVELPEVGTEVTQGGGFGAV 83

Query: 138 ESVKATSDINSPISGKVVEVNEELSSSPGLVNASPFKKGWMIKVEM 1
           ESVKATSDINSP+SGKVVEVNEEL+SSP  VN+SP++ GW+IKVE+
Sbjct: 84  ESVKATSDINSPVSGKVVEVNEELNSSPAKVNSSPYEDGWIIKVEL 129


>ref|XP_002321819.1| precursor of carboxylase h-protein 2, glycine decarboxylase complex
           [Populus trichocarpa] gi|222868815|gb|EEF05946.1|
           precursor of carboxylase h-protein 2, glycine
           decarboxylase complex [Populus trichocarpa]
          Length = 155

 Score =  179 bits (453), Expect = 3e-43
 Identities = 84/106 (79%), Positives = 97/106 (91%)
 Frame = -1

Query: 318 FASVVKELKYCNSHEWVKADGNSATVGITDHAQDHLGDVVYVELPEVGDVVTQGNQFGSV 139
           FASV+K+LKY  SHEWVK DGN+ATVGITDHAQDHLGDVVYVELPEVG  V QG+ FG+V
Sbjct: 24  FASVIKDLKYAESHEWVKVDGNTATVGITDHAQDHLGDVVYVELPEVGAAVNQGSGFGAV 83

Query: 138 ESVKATSDINSPISGKVVEVNEELSSSPGLVNASPFKKGWMIKVEM 1
           ESVKATSD+ SP+SG VVEVNEELSSSPGLVN+SP++KGW++KVE+
Sbjct: 84  ESVKATSDVYSPVSGNVVEVNEELSSSPGLVNSSPYEKGWIMKVEI 129


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