BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021071
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143627.1| PREDICTED: F-box protein At4g00755-like [Cuc...    63   7e-08
ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Gly...    60   4e-07
ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Gly...    58   2e-06

>ref|XP_004143627.1| PREDICTED: F-box protein At4g00755-like [Cucumis sativus]
           gi|449527838|ref|XP_004170916.1| PREDICTED: F-box
           protein At4g00755-like [Cucumis sativus]
          Length = 370

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
 Frame = -3

Query: 727 VSHVQVVGRPLLPPFAAEVINHSGKSVLKY---CCESDCTERACEVDHGEPSRQNSLTAR 557
           V HV+VVGRPLLP +  ++I+ SGK +LKY     ES  T       HG      ++T+R
Sbjct: 278 VCHVEVVGRPLLPEYDMDIIDQSGKGILKYFPNLHESSSTNGQISHSHG-----RAITSR 332

Query: 556 FMRR-AGGWERVIMNTLLG 503
           F+RR   GWE ++ +TLLG
Sbjct: 333 FVRRGVHGWEHIVWHTLLG 351


>ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 374

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
 Frame = -3

Query: 727 VSHVQVVGRPLLPPFAAEVINHSGKSVLKYCCESDC----TERACEVDHGEPSRQNSLTA 560
           +SHVQ +GR + P F  ++ + SGK  LKYC + DC    +  +   D   PSR  ++T+
Sbjct: 282 ISHVQAMGRSISPEFDVKIHHPSGKCTLKYCPQIDCYVSSSTSSQRSDSSNPSRLRTITS 341

Query: 559 RFMRR-AGGWERVIMNTLLGNVEDYSDNDSDEE 464
             M+R    WE+ +++ LLG   D    D+D++
Sbjct: 342 NIMQRGVRRWEQFLLSALLGTATDPVVVDNDDQ 374


>ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 372

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
 Frame = -3

Query: 727 VSHVQVVGRPLLPPFAAEVINHSGKSVLKYCCESDC----TERACEVDHGEPSRQNSLTA 560
           +SHVQV+GR L P F  ++ + SGK  LKYC ++DC       +   +   PSR  ++T+
Sbjct: 282 ISHVQVMGRLLFPEFDVKIHHWSGKCTLKYCPQTDCYMSSPTSSPRSNSSNPSRLRTITS 341

Query: 559 RFMRR-AGGWERVIMNTLLGNVEDYSDND 476
             M+R    WE+ ++  LLG      DN+
Sbjct: 342 SIMQRGVRRWEQFLLGALLGTGPVVVDNE 370