BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021068
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533149.1| catalytic, putative [Ricinus communis] gi|22...   131   5e-29
ref|XP_002283725.1| PREDICTED: ribosomal RNA large subunit methy...   129   3e-28
ref|NP_850319.1| radical SAM domain-containing protein [Arabidop...   128   6e-28
ref|XP_002879809.1| radical SAM domain-containing protein [Arabi...   128   6e-28
ref|NP_565909.1| radical SAM domain-containing protein [Arabidop...   128   6e-28

>ref|XP_002533149.1| catalytic, putative [Ricinus communis] gi|223527044|gb|EEF29230.1|
           catalytic, putative [Ricinus communis]
          Length = 420

 Score =  131 bits (330), Expect = 5e-29
 Identities = 60/69 (86%), Positives = 68/69 (98%)
 Frame = +1

Query: 13  KVGCQLRCSFCATGKGGYSRNLKRHEIVEQVLSVEELFKHRVSNVVFMGMGEPMLNLKSV 192
           +VGC LRCSFCATGKGGYSRNLKRHEIVEQVL++EE+FK+RV+NVVFMGMGEPMLNLKSV
Sbjct: 167 QVGCPLRCSFCATGKGGYSRNLKRHEIVEQVLAIEEIFKNRVTNVVFMGMGEPMLNLKSV 226

Query: 193 LEAHKCLNE 219
           LEAH+CLN+
Sbjct: 227 LEAHRCLNK 235


>ref|XP_002283725.1| PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis
           vinifera] gi|296086245|emb|CBI31686.3| unnamed protein
           product [Vitis vinifera]
          Length = 407

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/69 (84%), Positives = 67/69 (97%)
 Frame = +1

Query: 13  KVGCQLRCSFCATGKGGYSRNLKRHEIVEQVLSVEELFKHRVSNVVFMGMGEPMLNLKSV 192
           +VGC LRCSFCATGKGGYSRNL+RHEIVEQVL++EE+FK RV+NVVFMGMGEPMLNLKSV
Sbjct: 154 QVGCPLRCSFCATGKGGYSRNLQRHEIVEQVLAIEEIFKQRVTNVVFMGMGEPMLNLKSV 213

Query: 193 LEAHKCLNE 219
           +EAH+CLN+
Sbjct: 214 IEAHRCLNK 222


>ref|NP_850319.1| radical SAM domain-containing protein [Arabidopsis thaliana]
           gi|330254611|gb|AEC09705.1| radical SAM
           domain-containing protein [Arabidopsis thaliana]
          Length = 431

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/69 (81%), Positives = 68/69 (98%)
 Frame = +1

Query: 13  KVGCQLRCSFCATGKGGYSRNLKRHEIVEQVLSVEELFKHRVSNVVFMGMGEPMLNLKSV 192
           +VGC LRCSFCATGKGG+SRNL+RHEI+EQVL++E++FKHRV+NVVFMGMGEPMLNLKSV
Sbjct: 177 QVGCPLRCSFCATGKGGFSRNLQRHEIIEQVLAIEDVFKHRVTNVVFMGMGEPMLNLKSV 236

Query: 193 LEAHKCLNE 219
           L+AH+CLN+
Sbjct: 237 LDAHRCLNK 245


>ref|XP_002879809.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325648|gb|EFH56068.1| radical SAM
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 419

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/69 (81%), Positives = 68/69 (98%)
 Frame = +1

Query: 13  KVGCQLRCSFCATGKGGYSRNLKRHEIVEQVLSVEELFKHRVSNVVFMGMGEPMLNLKSV 192
           +VGC LRCSFCATGKGG+SRNL+RHEI+EQVL++E++FKHRV+NVVFMGMGEPMLNLKSV
Sbjct: 165 QVGCPLRCSFCATGKGGFSRNLQRHEIIEQVLAIEDVFKHRVTNVVFMGMGEPMLNLKSV 224

Query: 193 LEAHKCLNE 219
           L+AH+CLN+
Sbjct: 225 LDAHRCLNK 233


>ref|NP_565909.1| radical SAM domain-containing protein [Arabidopsis thaliana]
           gi|15809964|gb|AAL06909.1| At2g39670/F17A14.4
           [Arabidopsis thaliana] gi|17065474|gb|AAL32891.1|
           Unknown protein [Arabidopsis thaliana]
           gi|20197047|gb|AAB97122.2| expressed protein
           [Arabidopsis thaliana] gi|23197704|gb|AAN15379.1|
           Unknown protein [Arabidopsis thaliana]
           gi|330254610|gb|AEC09704.1| radical SAM
           domain-containing protein [Arabidopsis thaliana]
          Length = 428

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/69 (81%), Positives = 68/69 (98%)
 Frame = +1

Query: 13  KVGCQLRCSFCATGKGGYSRNLKRHEIVEQVLSVEELFKHRVSNVVFMGMGEPMLNLKSV 192
           +VGC LRCSFCATGKGG+SRNL+RHEI+EQVL++E++FKHRV+NVVFMGMGEPMLNLKSV
Sbjct: 174 QVGCPLRCSFCATGKGGFSRNLQRHEIIEQVLAIEDVFKHRVTNVVFMGMGEPMLNLKSV 233

Query: 193 LEAHKCLNE 219
           L+AH+CLN+
Sbjct: 234 LDAHRCLNK 242