BLASTX nr result
ID: Coptis25_contig00021067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00021067
(1110 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW83081.1| hypothetical protein ZEAMMB73_420214 [Zea mays] 83 3e-22
ref|NP_001151750.1| LOC100285385 [Zea mays] gi|195649509|gb|ACG4... 83 6e-22
tpg|DAA58644.1| TPA: hypothetical protein ZEAMMB73_094988, parti... 83 6e-22
ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom... 88 1e-21
ref|XP_004145461.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom... 84 3e-21
>gb|AFW83081.1| hypothetical protein ZEAMMB73_420214 [Zea mays]
Length = 744
Score = 82.8 bits (203), Expect(2) = 3e-22
Identities = 47/89 (52%), Positives = 63/89 (70%)
Frame = +1
Query: 106 LSELKAKY*KQLSEALIEPVDSLLHVSGRDTLASIRRLL*CETESAVAKFSTSLSGFELD 285
LSEL AKY QL++AL+EPV+SLL + DT +IR+LL ET++AV +++S FELD
Sbjct: 403 LSELCAKYEAQLTKALVEPVESLLDSASEDTWPAIRKLLQRETKTAVLGLESAVSAFELD 462
Query: 286 QATYNGMVLDLR*FVRSLVEKKAKEEAGR 372
+AT ++ L RS+VE KAKEEAGR
Sbjct: 463 EATEKELLAKLEKHGRSVVESKAKEEAGR 491
Score = 49.7 bits (117), Expect(2) = 3e-22
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +3
Query: 3 DAAI*QANLDPTKVREKLRRDIEAHAASVRSEKL 104
DAAI Q N D +KVR+KLRRDIEAH ASVR+ KL
Sbjct: 370 DAAIQQVNWDTSKVRDKLRRDIEAHVASVRAAKL 403
Score = 74.3 bits (181), Expect = 5e-11
Identities = 32/46 (69%), Positives = 41/46 (89%)
Frame = +3
Query: 423 TDPLASNTWEEVSPKDVLITPVQCKSLWRQFKTETEYTMTQAISSQ 560
+DPLAS++WE V+ + LITPVQCK+LWRQFK ETEYT+TQAI++Q
Sbjct: 557 SDPLASSSWERVAEEKTLITPVQCKNLWRQFKAETEYTVTQAIAAQ 602
>ref|NP_001151750.1| LOC100285385 [Zea mays] gi|195649509|gb|ACG44222.1| protein SEY1
[Zea mays]
Length = 809
Score = 82.8 bits (203), Expect(2) = 6e-22
Identities = 47/89 (52%), Positives = 64/89 (71%)
Frame = +1
Query: 106 LSELKAKY*KQLSEALIEPVDSLLHVSGRDTLASIRRLL*CETESAVAKFSTSLSGFELD 285
LSEL AKY QL++AL EPV+SLL + DT +IR+LL ET++AV+ +++S FELD
Sbjct: 450 LSELCAKYEAQLTKALAEPVESLLDSASEDTWPAIRKLLQRETKTAVSGLQSAVSAFELD 509
Query: 286 QATYNGMVLDLR*FVRSLVEKKAKEEAGR 372
+AT +++ L RS+VE KAKEEAGR
Sbjct: 510 EATEKELLVKLEKHGRSVVESKAKEEAGR 538
Score = 48.5 bits (114), Expect(2) = 6e-22
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +3
Query: 3 DAAI*QANLDPTKVREKLRRDIEAHAASVRSEKL 104
DAAI Q N D +KV++KLRRDIEAH ASVR+ KL
Sbjct: 417 DAAIQQVNWDTSKVKDKLRRDIEAHVASVRAAKL 450
Score = 76.3 bits (186), Expect = 1e-11
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +3
Query: 423 TDPLASNTWEEVSPKDVLITPVQCKSLWRQFKTETEYTMTQAISSQ 560
TDPLAS++WE V+ + LITPVQCKSLWRQFK ETEYT+TQA+++Q
Sbjct: 622 TDPLASSSWERVAEEKTLITPVQCKSLWRQFKAETEYTVTQALAAQ 667
>tpg|DAA58644.1| TPA: hypothetical protein ZEAMMB73_094988, partial [Zea mays]
Length = 247
Score = 82.8 bits (203), Expect(2) = 6e-22
Identities = 47/89 (52%), Positives = 64/89 (71%)
Frame = +1
Query: 106 LSELKAKY*KQLSEALIEPVDSLLHVSGRDTLASIRRLL*CETESAVAKFSTSLSGFELD 285
LSEL AKY QL++AL EPV+SLL + DT +IR+LL ET++AV+ +++S FELD
Sbjct: 112 LSELCAKYEAQLTKALAEPVESLLDSASEDTWPAIRKLLQRETKTAVSGLQSAVSAFELD 171
Query: 286 QATYNGMVLDLR*FVRSLVEKKAKEEAGR 372
+AT +++ L RS+VE KAKEEAGR
Sbjct: 172 EATEKELLVKLEKHGRSVVESKAKEEAGR 200
Score = 48.5 bits (114), Expect(2) = 6e-22
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +3
Query: 3 DAAI*QANLDPTKVREKLRRDIEAHAASVRSEKL 104
DAAI Q N D +KV++KLRRDIEAH ASVR+ KL
Sbjct: 79 DAAIQQVNWDTSKVKDKLRRDIEAHVASVRAAKL 112
>ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine
max]
Length = 829
Score = 87.4 bits (215), Expect(2) = 1e-21
Identities = 46/89 (51%), Positives = 63/89 (70%)
Frame = +1
Query: 106 LSELKAKY*KQLSEALIEPVDSLLHVSGRDTLASIRRLL*CETESAVAKFSTSLSGFELD 285
LSE+ A + K+L++AL EPV+SL G+DT SIR LL ETE AV++FS S++GFELD
Sbjct: 452 LSEITANFEKKLAKALTEPVESLFEAGGKDTWLSIRELLKRETEIAVSEFSASVAGFELD 511
Query: 286 QATYNGMVLDLR*FVRSLVEKKAKEEAGR 372
+ T M LR + R +VE KA++EAG+
Sbjct: 512 EETVERMQQSLRDYARKVVENKARDEAGK 540
Score = 42.7 bits (99), Expect(2) = 1e-21
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +3
Query: 3 DAAI*QANLDPTKVREKLRRDIEAHAASVRSEKL 104
DAA+ QAN +KVR+KL RDI++H +S+RS KL
Sbjct: 419 DAAVRQANWGASKVRDKLHRDIDSHTSSMRSTKL 452
Score = 88.2 bits (217), Expect = 3e-15
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = +3
Query: 420 STDPLASNTWEEVSPKDVLITPVQCKSLWRQFKTETEYTMTQAISSQVCY 569
S DPLAS+TWEEVSP+DVLITPVQCK+LWRQF+ ETEYT+TQAIS+Q Y
Sbjct: 626 SVDPLASSTWEEVSPEDVLITPVQCKALWRQFQGETEYTVTQAISAQEAY 675
>ref|XP_004145461.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Cucumis
sativus] gi|449513053|ref|XP_004164215.1| PREDICTED:
protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Cucumis
sativus]
Length = 809
Score = 83.6 bits (205), Expect(2) = 3e-21
Identities = 47/94 (50%), Positives = 65/94 (69%)
Frame = +1
Query: 85 LSVVRN*LSELKAKY*KQLSEALIEPVDSLLHVSGRDTLASIRRLL*CETESAVAKFSTS 264
LS+ LS + A Y K+L+EAL +PV SLL SG+D ASIR++L ETE V+KFS
Sbjct: 445 LSIQNEKLSGMIASYEKRLTEALSQPVRSLLEASGKDAWASIRKILQHETEITVSKFSAD 504
Query: 265 LSGFELDQATYNGMVLDLR*FVRSLVEKKAKEEA 366
++GFELD+ + MV +LR R++VE +A+EEA
Sbjct: 505 IAGFELDKDKVDNMVQNLRNHSRNVVENRAREEA 538
Score = 45.4 bits (106), Expect(2) = 3e-21
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +3
Query: 3 DAAI*QANLDPTKVREKLRRDIEAHAASVRSEKL 104
DAA+ QAN DP+K REKL +DI+ HA S+++EKL
Sbjct: 419 DAAVQQANWDPSKFREKLCQDIDRHALSIQNEKL 452
Score = 83.2 bits (204), Expect = 1e-13
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = +3
Query: 414 GISTDPLASNTWEEVSPKDVLITPVQCKSLWRQFKTETEYTMTQAISSQVCY 569
G S+DPLAS+TWE+V KD LITPVQCKSLWRQFK ETEY +TQAI++Q Y
Sbjct: 617 GSSSDPLASSTWEKVLEKDTLITPVQCKSLWRQFKAETEYMVTQAITAQEAY 668