BLASTX nr result

ID: Coptis25_contig00021066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021066
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32873.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-conta...   107   1e-21
ref|XP_002533583.1| zinc finger protein, putative [Ricinus commu...    97   1e-18
ref|XP_003518529.1| PREDICTED: zinc finger protein 84-like [Glyc...    94   9e-18

>emb|CBI32873.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/75 (65%), Positives = 59/75 (78%)
 Frame = +2

Query: 2   YYCDYCGVSRSKKCLLTSHLLSNHKEEMERAKLECGEEEKEGTKSNTCEECGTSFRKPAY 181
           Y+CDYCG+ RSKK L+ +H+LS+HKEEME  K+    EEKEG KSN CEECG SF+KPAY
Sbjct: 18  YFCDYCGLCRSKKALIRAHMLSHHKEEMEGQKVH-NNEEKEGEKSNACEECGASFKKPAY 76

Query: 182 LKEHMRSHSNEIYGF 226
           LK+HM+SHS E   F
Sbjct: 77  LKQHMQSHSLEALNF 91


>ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|222835723|gb|EEE74158.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  108 bits (270), Expect = 5e-22
 Identities = 49/81 (60%), Positives = 63/81 (77%)
 Frame = +2

Query: 2   YYCDYCGVSRSKKCLLTSHLLSNHKEEMERAKLECGEEEKEGTKSNTCEECGTSFRKPAY 181
           YYCDYCG+ RSKK L+TSH+L++HKEEM+   ++ G+E KEG KSNTCE CG SF+KPAY
Sbjct: 6   YYCDYCGICRSKKSLITSHVLTHHKEEMDEESVD-GDEGKEGVKSNTCENCGASFKKPAY 64

Query: 182 LKEHMRSHSNEIYGFSKFENC 244
           L +HM+SHS E      F++C
Sbjct: 65  LIQHMQSHSLERPFKCLFDDC 85


>ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-containing protein 10-like
           [Vitis vinifera]
          Length = 370

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/71 (67%), Positives = 58/71 (81%)
 Frame = +2

Query: 2   YYCDYCGVSRSKKCLLTSHLLSNHKEEMERAKLECGEEEKEGTKSNTCEECGTSFRKPAY 181
           Y+CDYCG+ RSKK L+ +H+LS+HKEEME  K+    EEKEG KSN CEECG SF+KPAY
Sbjct: 18  YFCDYCGLCRSKKALIRAHMLSHHKEEMEGQKVH-NNEEKEGEKSNACEECGASFKKPAY 76

Query: 182 LKEHMRSHSNE 214
           LK+HM+SHS E
Sbjct: 77  LKQHMQSHSLE 87


>ref|XP_002533583.1| zinc finger protein, putative [Ricinus communis]
           gi|223526542|gb|EEF28801.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 367

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/71 (60%), Positives = 56/71 (78%)
 Frame = +2

Query: 2   YYCDYCGVSRSKKCLLTSHLLSNHKEEMERAKLECGEEEKEGTKSNTCEECGTSFRKPAY 181
           Y+CDYCG+ RSKK L+TSH+ ++HKEEM + K + G  E +G KSNTC ECG +F+K AY
Sbjct: 20  YFCDYCGICRSKKSLITSHIQTHHKEEMNKDKSDEG-VEADGVKSNTCAECGANFKKAAY 78

Query: 182 LKEHMRSHSNE 214
           L++HMRSHS E
Sbjct: 79  LRQHMRSHSLE 89


>ref|XP_003518529.1| PREDICTED: zinc finger protein 84-like [Glycine max]
          Length = 362

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/71 (59%), Positives = 56/71 (78%)
 Frame = +2

Query: 2   YYCDYCGVSRSKKCLLTSHLLSNHKEEMERAKLECGEEEKEGTKSNTCEECGTSFRKPAY 181
           YYC+YCG+ RSKK L+TSH+  +HKEE E+A+ E  + E E +KSN+CEECG +F+K AY
Sbjct: 19  YYCEYCGICRSKKTLITSHINLHHKEEYEKARAE-RDPEAEASKSNSCEECGATFKKHAY 77

Query: 182 LKEHMRSHSNE 214
           L +HM+SHS E
Sbjct: 78  LLQHMQSHSLE 88


Top