BLASTX nr result

ID: Coptis25_contig00021052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021052
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...    80   1e-13
ref|XP_004172712.1| PREDICTED: uncharacterized protein LOC101232...    75   5e-12
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...    75   5e-12
ref|XP_002314760.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10

>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
           vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
           product [Vitis vinifera]
          Length = 475

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/72 (56%), Positives = 52/72 (72%)
 Frame = +1

Query: 1   EQRGEVKQESKMDSSSGPIDRSDDKKPNNHEKDDKNSIQDEYVKAYYAALLKRQXXXXXX 180
           EQRGE+KQESKM SSS P+  SDDKK   + KD++ ++QDEYVKAYYAA+LKRQ      
Sbjct: 338 EQRGEIKQESKMGSSSAPLGSSDDKKSTTN-KDEEKNLQDEYVKAYYAAILKRQQEQEEA 396

Query: 181 ASRRQEFSSPSI 216
           A ++ E S+  I
Sbjct: 397 AKKQLELSNAHI 408


>ref|XP_004172712.1| PREDICTED: uncharacterized protein LOC101232004 [Cucumis sativus]
          Length = 188

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 41/78 (52%), Positives = 51/78 (65%)
 Frame = +1

Query: 1   EQRGEVKQESKMDSSSGPIDRSDDKKPNNHEKDDKNSIQDEYVKAYYAALLKRQXXXXXX 180
           EQRGEVK ESK D+ S     SDDKK   ++ DDK +IQDEYVKAYYAA+LK+Q      
Sbjct: 49  EQRGEVKDESKTDAGSASAQFSDDKKSLAND-DDKTNIQDEYVKAYYAAILKKQQELEEA 107

Query: 181 ASRRQEFSSPSIVSNDAS 234
           A  +QE SS  +  + A+
Sbjct: 108 AKGQQELSSTEVTESVAN 125


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
           sativus]
          Length = 475

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 41/78 (52%), Positives = 51/78 (65%)
 Frame = +1

Query: 1   EQRGEVKQESKMDSSSGPIDRSDDKKPNNHEKDDKNSIQDEYVKAYYAALLKRQXXXXXX 180
           EQRGEVK ESK D+ S     SDDKK   ++ DDK +IQDEYVKAYYAA+LK+Q      
Sbjct: 337 EQRGEVKDESKTDAGSASAQFSDDKKSLAND-DDKTNIQDEYVKAYYAAILKKQQELEEA 395

Query: 181 ASRRQEFSSPSIVSNDAS 234
           A  +QE SS  +  + A+
Sbjct: 396 AKGQQELSSTEVTESVAN 413


>ref|XP_002314760.1| predicted protein [Populus trichocarpa] gi|222863800|gb|EEF00931.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/80 (52%), Positives = 53/80 (66%)
 Frame = +1

Query: 1   EQRGEVKQESKMDSSSGPIDRSDDKKPNNHEKDDKNSIQDEYVKAYYAALLKRQXXXXXX 180
           EQRGEVKQESKMDSSS  ++ SD+KK          S ++EYVKAYYAALL++Q      
Sbjct: 304 EQRGEVKQESKMDSSSTAVEFSDEKK----------SAKEEYVKAYYAALLEQQRQAEES 353

Query: 181 ASRRQEFSSPSIVSNDASEA 240
           A ++QE S  S +SN  SE+
Sbjct: 354 AKQQQELSQTS-MSNGLSES 372


>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/80 (55%), Positives = 53/80 (66%)
 Frame = +1

Query: 1   EQRGEVKQESKMDSSSGPIDRSDDKKPNNHEKDDKNSIQDEYVKAYYAALLKRQXXXXXX 180
           EQRGEVKQ SKMD SS   +  DDKK +  E DDK  I+DEYVKAYYAALL++Q      
Sbjct: 335 EQRGEVKQGSKMDDSSAAAEPPDDKKISI-ENDDK--IKDEYVKAYYAALLQKQREAEES 391

Query: 181 ASRRQEFSSPSIVSNDASEA 240
           A ++QE    SI SN  S++
Sbjct: 392 AEKQQELLQTSI-SNGFSKS 410


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