BLASTX nr result
ID: Coptis25_contig00021052
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021052 (245 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633196.1| PREDICTED: general transcription factor IIE ... 80 1e-13 ref|XP_004172712.1| PREDICTED: uncharacterized protein LOC101232... 75 5e-12 ref|XP_004138223.1| PREDICTED: general transcription factor IIE ... 75 5e-12 ref|XP_002314760.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-10 ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2... 69 3e-10 >ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis vinifera] gi|297735317|emb|CBI17757.3| unnamed protein product [Vitis vinifera] Length = 475 Score = 80.5 bits (197), Expect = 1e-13 Identities = 41/72 (56%), Positives = 52/72 (72%) Frame = +1 Query: 1 EQRGEVKQESKMDSSSGPIDRSDDKKPNNHEKDDKNSIQDEYVKAYYAALLKRQXXXXXX 180 EQRGE+KQESKM SSS P+ SDDKK + KD++ ++QDEYVKAYYAA+LKRQ Sbjct: 338 EQRGEIKQESKMGSSSAPLGSSDDKKSTTN-KDEEKNLQDEYVKAYYAAILKRQQEQEEA 396 Query: 181 ASRRQEFSSPSI 216 A ++ E S+ I Sbjct: 397 AKKQLELSNAHI 408 >ref|XP_004172712.1| PREDICTED: uncharacterized protein LOC101232004 [Cucumis sativus] Length = 188 Score = 75.1 bits (183), Expect = 5e-12 Identities = 41/78 (52%), Positives = 51/78 (65%) Frame = +1 Query: 1 EQRGEVKQESKMDSSSGPIDRSDDKKPNNHEKDDKNSIQDEYVKAYYAALLKRQXXXXXX 180 EQRGEVK ESK D+ S SDDKK ++ DDK +IQDEYVKAYYAA+LK+Q Sbjct: 49 EQRGEVKDESKTDAGSASAQFSDDKKSLAND-DDKTNIQDEYVKAYYAAILKKQQELEEA 107 Query: 181 ASRRQEFSSPSIVSNDAS 234 A +QE SS + + A+ Sbjct: 108 AKGQQELSSTEVTESVAN 125 >ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis sativus] Length = 475 Score = 75.1 bits (183), Expect = 5e-12 Identities = 41/78 (52%), Positives = 51/78 (65%) Frame = +1 Query: 1 EQRGEVKQESKMDSSSGPIDRSDDKKPNNHEKDDKNSIQDEYVKAYYAALLKRQXXXXXX 180 EQRGEVK ESK D+ S SDDKK ++ DDK +IQDEYVKAYYAA+LK+Q Sbjct: 337 EQRGEVKDESKTDAGSASAQFSDDKKSLAND-DDKTNIQDEYVKAYYAAILKKQQELEEA 395 Query: 181 ASRRQEFSSPSIVSNDAS 234 A +QE SS + + A+ Sbjct: 396 AKGQQELSSTEVTESVAN 413 >ref|XP_002314760.1| predicted protein [Populus trichocarpa] gi|222863800|gb|EEF00931.1| predicted protein [Populus trichocarpa] Length = 429 Score = 69.7 bits (169), Expect = 2e-10 Identities = 42/80 (52%), Positives = 53/80 (66%) Frame = +1 Query: 1 EQRGEVKQESKMDSSSGPIDRSDDKKPNNHEKDDKNSIQDEYVKAYYAALLKRQXXXXXX 180 EQRGEVKQESKMDSSS ++ SD+KK S ++EYVKAYYAALL++Q Sbjct: 304 EQRGEVKQESKMDSSSTAVEFSDEKK----------SAKEEYVKAYYAALLEQQRQAEES 353 Query: 181 ASRRQEFSSPSIVSNDASEA 240 A ++QE S S +SN SE+ Sbjct: 354 AKQQQELSQTS-MSNGLSES 372 >ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1| predicted protein [Populus trichocarpa] Length = 472 Score = 69.3 bits (168), Expect = 3e-10 Identities = 44/80 (55%), Positives = 53/80 (66%) Frame = +1 Query: 1 EQRGEVKQESKMDSSSGPIDRSDDKKPNNHEKDDKNSIQDEYVKAYYAALLKRQXXXXXX 180 EQRGEVKQ SKMD SS + DDKK + E DDK I+DEYVKAYYAALL++Q Sbjct: 335 EQRGEVKQGSKMDDSSAAAEPPDDKKISI-ENDDK--IKDEYVKAYYAALLQKQREAEES 391 Query: 181 ASRRQEFSSPSIVSNDASEA 240 A ++QE SI SN S++ Sbjct: 392 AEKQQELLQTSI-SNGFSKS 410