BLASTX nr result

ID: Coptis25_contig00021047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021047
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266606.1| PREDICTED: DUF246 domain-containing protein ...   283   5e-74
ref|XP_002313473.1| predicted protein [Populus trichocarpa] gi|2...   275   8e-72
ref|XP_002520639.1| conserved hypothetical protein [Ricinus comm...   274   2e-71
ref|XP_002880120.1| hypothetical protein ARALYDRAFT_483577 [Arab...   270   4e-70
ref|XP_004161417.1| PREDICTED: DUF246 domain-containing protein ...   269   6e-70

>ref|XP_002266606.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera] gi|297736200|emb|CBI24838.3| unnamed protein
           product [Vitis vinifera]
          Length = 536

 Score =  283 bits (723), Expect = 5e-74
 Identities = 149/207 (71%), Positives = 169/207 (81%), Gaps = 5/207 (2%)
 Frame = +2

Query: 275 IGMLK----LSPLVPFTPYPCFISPPLVQEHQQVSFPS-SNNIXXXXXXXXXXFWKQPDG 439
           I MLK    L PL+PF+P PC I+    Q    VS  S S+++          FW+QPDG
Sbjct: 63  IAMLKMGFNLEPLIPFSPNPCGIT----QSQGIVSAGSLSSHLGVKEDGEKSEFWEQPDG 118

Query: 440 LGYKPCLGFSEEYREMSDGIVKDRRNYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVP 619
           LGY+PCL FS+EY++ S  IV+DR  YLMVVVSGGMNQQRNQIVDAVVIARILGAALVVP
Sbjct: 119 LGYRPCLEFSKEYKKTSLEIVEDRTKYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVP 178

Query: 620 ILQVNVIWSDESEFADIFDLEHFKKVLADDVRIVSSLPSTHLMSRPIEEKKTPLHASPRW 799
           ILQVNVIW DESEF+DIFD+EHFK+VLA+DVRIVSSLPSTHLMSRP+EEK+TPLH SP+W
Sbjct: 179 ILQVNVIWGDESEFSDIFDMEHFKRVLANDVRIVSSLPSTHLMSRPVEEKRTPLHVSPQW 238

Query: 800 IRARYLKRLNRDGVLLLRGLDSRLSKD 880
           IRARYLKRL R+GVLLLRGLDSRLSKD
Sbjct: 239 IRARYLKRLRREGVLLLRGLDSRLSKD 265


>ref|XP_002313473.1| predicted protein [Populus trichocarpa] gi|222849881|gb|EEE87428.1|
           predicted protein [Populus trichocarpa]
          Length = 570

 Score =  275 bits (704), Expect = 8e-72
 Identities = 155/286 (54%), Positives = 181/286 (63%), Gaps = 29/286 (10%)
 Frame = +2

Query: 110 LSCITISSQMIPAXXXXXXXXXXXXPKKPTHNKHANXXXXXXXXXXXXXXXXXXXIGMLK 289
           +S I++ SQ+I +            PKKP+ N+                      +G LK
Sbjct: 11  VSYISVPSQIINSLSSSSLQSLLIPPKKPSANRFFGLKWFRSPRFWFLALFLCGFLGTLK 70

Query: 290 L----SPLVPFTPYPCFISPPLVQE-------HQQVSFPSSNNIXXXXXXXXXX------ 418
           L     PL+PF+PYPC      +QE        QQ+ F S++                  
Sbjct: 71  LWYTLDPLIPFSPYPCVTRQSQLQESFSNGHTRQQLGFVSNDERNDKKDQESLKGVVDFQ 130

Query: 419 ------------FWKQPDGLGYKPCLGFSEEYREMSDGIVKDRRNYLMVVVSGGMNQQRN 562
                       FWKQPDGLGYKPCL FS +YR  S+ I +DRR YL+VVVSGGMNQQRN
Sbjct: 131 GGISGGVEEESEFWKQPDGLGYKPCLKFSSDYRRGSELIFEDRRKYLLVVVSGGMNQQRN 190

Query: 563 QIVDAVVIARILGAALVVPILQVNVIWSDESEFADIFDLEHFKKVLADDVRIVSSLPSTH 742
           QIVDAVVIARILGAALVVPILQVNVIW DESEF+DIFDL +FK+VLA+DVRIVSSLPS H
Sbjct: 191 QIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLANFKRVLANDVRIVSSLPSYH 250

Query: 743 LMSRPIEEKKTPLHASPRWIRARYLKRLNRDGVLLLRGLDSRLSKD 880
           L  RP+ E +TPLH SP+WIRARYLKRLNR+GVLLLRGLDSRLSKD
Sbjct: 251 LTRRPVVESRTPLHVSPQWIRARYLKRLNREGVLLLRGLDSRLSKD 296


>ref|XP_002520639.1| conserved hypothetical protein [Ricinus communis]
           gi|223540159|gb|EEF41735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 589

 Score =  274 bits (700), Expect = 2e-71
 Identities = 133/154 (86%), Positives = 147/154 (95%)
 Frame = +2

Query: 419 FWKQPDGLGYKPCLGFSEEYREMSDGIVKDRRNYLMVVVSGGMNQQRNQIVDAVVIARIL 598
           FWKQPDGLGYKPCL FS+EYR  S+ +VKDRR YL+VVVSGGMNQQRNQIVDAVVIARIL
Sbjct: 166 FWKQPDGLGYKPCLDFSKEYRRGSELVVKDRRKYLIVVVSGGMNQQRNQIVDAVVIARIL 225

Query: 599 GAALVVPILQVNVIWSDESEFADIFDLEHFKKVLADDVRIVSSLPSTHLMSRPIEEKKTP 778
           GAALVVPILQVNVIW DESEF+DIFDLE+FK+VLA+DVRIVSSLPSTH+M+RP+EEK+TP
Sbjct: 226 GAALVVPILQVNVIWGDESEFSDIFDLEYFKRVLANDVRIVSSLPSTHIMTRPVEEKRTP 285

Query: 779 LHASPRWIRARYLKRLNRDGVLLLRGLDSRLSKD 880
           LH SP+WIRARYLKRLNR+GVLLLRGLDSRLSKD
Sbjct: 286 LHVSPQWIRARYLKRLNREGVLLLRGLDSRLSKD 319


>ref|XP_002880120.1| hypothetical protein ARALYDRAFT_483577 [Arabidopsis lyrata subsp.
           lyrata] gi|297325959|gb|EFH56379.1| hypothetical protein
           ARALYDRAFT_483577 [Arabidopsis lyrata subsp. lyrata]
          Length = 576

 Score =  270 bits (689), Expect = 4e-70
 Identities = 152/283 (53%), Positives = 184/283 (65%), Gaps = 26/283 (9%)
 Frame = +2

Query: 110 LSCITISSQMIPAXXXXXXXXXXXXPKKPTHNKHANXXXXXXXXXXXXXXXXXXXIGMLK 289
           +S I++ SQ+I +            PKK + + +                      GMLK
Sbjct: 17  VSYISVPSQIINSLSSSSLQSLLVSPKKSSRSINRFSFSYRNPRIWFFTLFLVSLFGMLK 76

Query: 290 LS----PL-VPFTPYPCFISPPLVQEHQQVS------------FPSSNNIXXXXXXXXXX 418
           L     P+ +PF+ YPC  + PL  + +Q +             P S+N           
Sbjct: 77  LGFNVDPISLPFSRYPCSTNHPLSFDGEQNAESHLGLVQESNLAPGSSNSNGIIQLDGGK 136

Query: 419 ---------FWKQPDGLGYKPCLGFSEEYREMSDGIVKDRRNYLMVVVSGGMNQQRNQIV 571
                    FWKQPDGLG+KPCLGF+ +YR  S+ I+K+R  YL+VVVSGGMNQQRNQIV
Sbjct: 137 NETLLTEGDFWKQPDGLGFKPCLGFTSQYRRDSNSILKNRWKYLLVVVSGGMNQQRNQIV 196

Query: 572 DAVVIARILGAALVVPILQVNVIWSDESEFADIFDLEHFKKVLADDVRIVSSLPSTHLMS 751
           DAVVIARILGA+LVVP+LQVNVIW DESEFADIFDLEHFK VLADDV IVSSLPSTH+M+
Sbjct: 197 DAVVIARILGASLVVPVLQVNVIWGDESEFADIFDLEHFKDVLADDVHIVSSLPSTHVMT 256

Query: 752 RPIEEKKTPLHASPRWIRARYLKRLNRDGVLLLRGLDSRLSKD 880
           RP+EEK+TPLHASP+WIRA YLKR+NR+ VLLLRGLDSRLSKD
Sbjct: 257 RPVEEKRTPLHASPQWIRAHYLKRINRERVLLLRGLDSRLSKD 299


>ref|XP_004161417.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 572

 Score =  269 bits (688), Expect = 6e-70
 Identities = 147/233 (63%), Positives = 161/233 (69%), Gaps = 32/233 (13%)
 Frame = +2

Query: 278 GMLKLS----PLVPFTPYPCFISP-----------------------PLVQEHQQVSFPS 376
           GMLKL+    PL+P+  YPCF S                         L  E    SF S
Sbjct: 70  GMLKLTFNPNPLIPYVSYPCFTSQWQSQGLVSNGVLKSGLIDRDRENALKDEVTSDSFQS 129

Query: 377 SNNIXXXXXXXXXX-----FWKQPDGLGYKPCLGFSEEYREMSDGIVKDRRNYLMVVVSG 541
              I               FWKQPDGLGYKPCL FSEEY++ + GIV +R  YLMVVVSG
Sbjct: 130 LRPISTGVLKSDEGNEQGEFWKQPDGLGYKPCLDFSEEYKKSTTGIVSERTKYLMVVVSG 189

Query: 542 GMNQQRNQIVDAVVIARILGAALVVPILQVNVIWSDESEFADIFDLEHFKKVLADDVRIV 721
           GMNQQRNQIVDAVVIARILGAALVVPILQVNVIW DESEF+DIFDLEHFK VLADDV IV
Sbjct: 190 GMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKNVLADDVHIV 249

Query: 722 SSLPSTHLMSRPIEEKKTPLHASPRWIRARYLKRLNRDGVLLLRGLDSRLSKD 880
           SSLPSTHLM+RP+EEK  P H SP WIR+RYL++L R+GVLLLRGLDSRLSKD
Sbjct: 250 SSLPSTHLMTRPVEEKSPPHHVSPSWIRSRYLRKLRREGVLLLRGLDSRLSKD 302


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