BLASTX nr result

ID: Coptis25_contig00021016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021016
         (1262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634173.1| PREDICTED: uncharacterized protein LOC100853...   118   4e-24
ref|XP_002515870.1| conserved hypothetical protein [Ricinus comm...   103   7e-20
ref|XP_002524424.1| conserved hypothetical protein [Ricinus comm...   103   9e-20
ref|XP_003602376.1| hypothetical protein MTR_3g092670 [Medicago ...    89   3e-15
ref|XP_002874202.1| hypothetical protein ARALYDRAFT_326742 [Arab...    84   8e-14

>ref|XP_003634173.1| PREDICTED: uncharacterized protein LOC100853133 [Vitis vinifera]
          Length = 985

 Score =  118 bits (295), Expect = 4e-24
 Identities = 82/202 (40%), Positives = 105/202 (51%), Gaps = 34/202 (16%)
 Frame = +1

Query: 64  WLDRLRSSKGFPLTNDQNLETFLXXXXXXXXXXXXXXXXXXXXVSDIS---ESP------ 216
           WLDRLRS+KGFP  ND +LE FL                    +SD +   E P      
Sbjct: 166 WLDRLRSAKGFPTGNDDDLEHFLTHRDPNLSNSPITKPSDPKSISDSTCSDEKPVQDRSQ 225

Query: 217 ------KQWFSTMSNVLAELFIMEEDDSINDSQIVKVRKSCRKQANPKVCVISR-RNEVK 375
                 K+WF  MSNVLAELF M + + I     +  +KS RKQ NPK+C++S  R E +
Sbjct: 226 PPETGEKEWFGIMSNVLAELFNMGDSNQIPK---LSGKKSSRKQTNPKICLLSSVRQEDE 282

Query: 376 VKEKTPSSS-NSVTIVKGNEG-----GESKLDLL------------GYSRLDLVVIDTSI 501
           V    PSS  NS+T +K + G      + K+D L             YSR ++ VIDTS 
Sbjct: 283 VPATAPSSGDNSLTEMKDSNGEVKTVNQGKVDCLDAEEEKCNQDLSAYSRSEVTVIDTSC 342

Query: 502 DVWKTEKLVLRKGDVWKVREKK 567
            VWK EKL+ RK +VWKVR+KK
Sbjct: 343 AVWKFEKLLFRKKNVWKVRDKK 364


>ref|XP_002515870.1| conserved hypothetical protein [Ricinus communis]
           gi|223545025|gb|EEF46539.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 268

 Score =  103 bits (258), Expect = 7e-20
 Identities = 75/211 (35%), Positives = 103/211 (48%), Gaps = 31/211 (14%)
 Frame = +1

Query: 28  GSLMWTQKPASNWLDRLRSSKGFPLTNDQNLETFLXXXXXXXXXXXXXXXXXXXXVSDIS 207
           GS+    K  SNWLDRLRS+KGFP T + +L+ FL                     SD +
Sbjct: 3   GSVFAGNKSGSNWLDRLRSTKGFPATENLDLDNFLSDPSLPNSESTQSLNRRV--TSDQT 60

Query: 208 ESP--------KQWFSTMSNVLAELFIMEEDDSINDSQIVKVRKSCRKQANPKVC-VISR 360
           E P        ++WF  ++NVL +LF M   DS + +  +  +KS RKQ NPK     S 
Sbjct: 61  EIPDTLRENGEREWFGVVTNVLCDLFNM--GDSQDKNSRISGKKSSRKQTNPKFFDADSV 118

Query: 361 RNEVKVKEKTPSS---SNSVTIVKGN-------------------EGGESKLDLLGYSRL 474
           R E  V+  T +S    N+  +V  N                   E   S  +L GYS+ 
Sbjct: 119 RKEEYVQAATTASFHSDNNSNVVGMNADCFVDDDDEYNGKLDEKKEKSSSDKELKGYSKS 178

Query: 475 DLVVIDTSIDVWKTEKLVLRKGDVWKVREKK 567
           ++ VIDTS +VWK +KLV R+  +WKVR+KK
Sbjct: 179 EVTVIDTSFEVWKFDKLVFRRKSIWKVRDKK 209


>ref|XP_002524424.1| conserved hypothetical protein [Ricinus communis]
           gi|223536308|gb|EEF37959.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 272

 Score =  103 bits (257), Expect = 9e-20
 Identities = 75/202 (37%), Positives = 103/202 (50%), Gaps = 29/202 (14%)
 Frame = +1

Query: 49  KPASNWLDRLRSSKGFPLTNDQNLETFLXXXXXXXXXXXXXXXXXXXXV-SDISESP--- 216
           K  SNWLDRLRS+KGFP T + +L+ FL                    V SD ++ P   
Sbjct: 10  KSGSNWLDRLRSTKGFPATENLDLDNFLSNSSLLNPSISESTLSHNKRVTSDQTQFPDTS 69

Query: 217 -----KQWFSTMSNVLAELFIMEEDDSINDSQIVKVRKSCRKQANPKVCVI-SRRNEVKV 378
                K+WF  ++NVL +LF M   DS + +  +   KS RKQ NPK   I S R E  V
Sbjct: 70  SENGEKEWFGLVTNVLCDLFNM--GDSQDKNSRLSGTKSSRKQTNPKFFDIESVRKEECV 127

Query: 379 KEKTPSS---SNSVTIVKGN----------------EGGESKLDLLGYSRLDLVVIDTSI 501
           +  TP+S    N+  +V  N                E   S  +L GYS+ ++ VIDTS 
Sbjct: 128 QVATPASFRSDNNSNVVGMNADCFSNDDDNNVDEEKEKCSSDKELKGYSKSEVTVIDTSF 187

Query: 502 DVWKTEKLVLRKGDVWKVREKK 567
           ++WK +KLV R+ ++WKVR+KK
Sbjct: 188 EMWKFDKLVFRRKNIWKVRDKK 209


>ref|XP_003602376.1| hypothetical protein MTR_3g092670 [Medicago truncatula]
           gi|355491424|gb|AES72627.1| hypothetical protein
           MTR_3g092670 [Medicago truncatula]
          Length = 216

 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 57/180 (31%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
 Frame = +1

Query: 43  TQKPASNWLDRLRSSKGFPLTNDQNLETFLXXXXXXXXXXXXXXXXXXXXVSDISESPKQ 222
           + KP SNWLDRLRS+KG P  ++ +L+TF+                         + P  
Sbjct: 7   SNKPGSNWLDRLRSNKGIPTDDNLDLDTFILNLATHSPQPRPIKPLRHRPPITHDDPP-- 64

Query: 223 WFSTMSNVLAELFIMEEDDSINDSQIVKVRKSC-RKQANPKVCVISRRNEVKVKEKTPSS 399
               ++ VLA LF        N        K C RKQ NPK+ + S           P++
Sbjct: 65  ----LTTVLAHLF--------NPGAATITSKKCPRKQTNPKIFIPSSTIISTTTANAPAA 112

Query: 400 SNSVTIV----KGNEGGESKLDLLGYSRLDLVVIDTSIDVWKTEKLVLRKGDVWKVREKK 567
           +     V    +G EG + + D  G+++ ++ VIDTS  VWK +K V R+ +VWK+RE+K
Sbjct: 113 TGVDAAVDVENRGVEGEDGEEDFKGFTKSEVTVIDTSCPVWKVDKFVFRRNNVWKIRERK 172


>ref|XP_002874202.1| hypothetical protein ARALYDRAFT_326742 [Arabidopsis lyrata subsp.
           lyrata] gi|297320039|gb|EFH50461.1| hypothetical protein
           ARALYDRAFT_326742 [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 69/223 (30%), Positives = 99/223 (44%), Gaps = 52/223 (23%)
 Frame = +1

Query: 55  ASNWLDRLRSSKGFPLTNDQN-------LETFLXXXXXXXXXXXXXXXXXXXXVS----- 198
           AS WL+RLR ++G   T D +       L+ FL                           
Sbjct: 12  ASTWLNRLRLNRGLSTTEDDDASGNPLTLDDFLRRNHHTEITATSSASDSPPSAPVPSDP 71

Query: 199 DISESPKQ------WFSTMSNVLAELFIMEEDDSINDSQIVKVRKSCRKQANPKVCVISR 360
           +++ESP +      W+  MS+VL+ELF      S   S I   +K  RKQ+NP+ C +  
Sbjct: 72  ELAESPSEEPVPGEWYGVMSDVLSELFNF--GGSSKSSTIPGKKKLPRKQSNPRHCSLDT 129

Query: 361 RNEV---------------KVKEKTPSSSNS-------VTIVKGN------------EGG 438
            N+V                V+E   SSS S          ++G             E  
Sbjct: 130 PNDVVPLVNQKSNDANCVPSVREFATSSSRSSYNKKTPAPEIRGRRRSVAEDEDVDEEEE 189

Query: 439 ESKLDLLGYSRLDLVVIDTSIDVWKTEKLVLRKGDVWKVREKK 567
           + + DL+G+SR ++ VIDTS  +WK+EKLV R+ +VWKVREKK
Sbjct: 190 KGEKDLVGFSRSEVTVIDTSFKIWKSEKLVFRRRNVWKVREKK 232


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