BLASTX nr result

ID: Coptis25_contig00021015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021015
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301476.1| multidrug resistance protein ABC transporter...   234   5e-60
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   230   8e-59
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   230   1e-58
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   229   1e-58
ref|XP_004136172.1| PREDICTED: ABC transporter C family member 4...   220   1e-55

>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1508

 Score =  234 bits (597), Expect = 5e-60
 Identities = 109/166 (65%), Positives = 142/166 (85%)
 Frame = +1

Query: 1    MKATSEMLNNMRVIKFQAWEEYFYKRVQDFRDAEYNWLSKFMFSISANFVFLWSTPVIVT 180
            MKAT+EMLN MRVIKFQAWEE+F KR+Q+FR++E+ W+SKF++SIS N + +WS P++V+
Sbjct: 505  MKATNEMLNYMRVIKFQAWEEHFNKRIQNFRESEFGWISKFLYSISGNIIVMWSAPLLVS 564

Query: 181  TLAFGTAMLLGFPLDAGTVFTATSLFKILQEPIWGFPQALISTSQAMISLGRLDGYLMSK 360
            TL FGTA+LLG PLDAGTVFT TS+FKILQEPI  FPQ++IS SQAM+SL RLD Y++SK
Sbjct: 565  TLTFGTALLLGVPLDAGTVFTTTSVFKILQEPIRTFPQSMISLSQAMVSLSRLDRYMISK 624

Query: 361  ELVEGAVEREEGCGEGIAIEVKDGMFAWDDDGGEIVLKILNLRIKK 498
            ELVE +VER +GC + IA+++KDG+F+WDD+  + VLK +NL IKK
Sbjct: 625  ELVEESVERVDGCDDRIAVQIKDGVFSWDDETEDDVLKNINLEIKK 670


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223537625|gb|EEF39248.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  230 bits (587), Expect = 8e-59
 Identities = 107/166 (64%), Positives = 138/166 (83%)
 Frame = +1

Query: 1    MKATSEMLNNMRVIKFQAWEEYFYKRVQDFRDAEYNWLSKFMFSISANFVFLWSTPVIVT 180
            MKAT+EMLN MRVIKFQAWEE+F KR+Q+FR++E+ WLSKFM+S+S N + +W TP++++
Sbjct: 503  MKATNEMLNYMRVIKFQAWEEHFNKRIQNFRESEFEWLSKFMYSVSGNIIVMWCTPLLIS 562

Query: 181  TLAFGTAMLLGFPLDAGTVFTATSLFKILQEPIWGFPQALISTSQAMISLGRLDGYLMSK 360
            T+ FGTA+L G PLDAGTVFT TS+FKILQ+PI  FPQ++IS SQAMISL RLD Y++SK
Sbjct: 563  TVTFGTALLFGVPLDAGTVFTTTSIFKILQDPIRSFPQSMISFSQAMISLERLDRYMLSK 622

Query: 361  ELVEGAVEREEGCGEGIAIEVKDGMFAWDDDGGEIVLKILNLRIKK 498
            ELVE +VER +GC   IA+E+KDG F+WDD+  + VLK +N  IKK
Sbjct: 623  ELVEQSVERVDGCDGRIAVEIKDGSFSWDDESEDEVLKNINFEIKK 668


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/166 (65%), Positives = 136/166 (81%)
 Frame = +1

Query: 1    MKATSEMLNNMRVIKFQAWEEYFYKRVQDFRDAEYNWLSKFMFSISANFVFLWSTPVIVT 180
            MKAT+EMLN MRVIKFQAWEE+F KR+Q FR++E+ WL+KFM+SIS N + +WSTP++++
Sbjct: 505  MKATNEMLNYMRVIKFQAWEEHFNKRIQSFRESEFGWLTKFMYSISGNIIVMWSTPLMIS 564

Query: 181  TLAFGTAMLLGFPLDAGTVFTATSLFKILQEPIWGFPQALISTSQAMISLGRLDGYLMSK 360
               F TA++LG  LDAGTVFT TS+FKILQEPI  FPQ++IS SQAMISL RLD Y+ S+
Sbjct: 565  AFTFATAIMLGVQLDAGTVFTTTSIFKILQEPIRAFPQSMISISQAMISLARLDKYMTSR 624

Query: 361  ELVEGAVEREEGCGEGIAIEVKDGMFAWDDDGGEIVLKILNLRIKK 498
            ELVE +VEREE C   IA+EVKDG+F+WDD+G E VL+ LN  IKK
Sbjct: 625  ELVESSVEREESCDGRIAVEVKDGVFSWDDEGKEEVLRNLNFEIKK 670


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1507

 Score =  229 bits (585), Expect = 1e-58
 Identities = 110/166 (66%), Positives = 138/166 (83%)
 Frame = +1

Query: 1    MKATSEMLNNMRVIKFQAWEEYFYKRVQDFRDAEYNWLSKFMFSISANFVFLWSTPVIVT 180
            MKAT+EMLN MRVIKFQAWE++F KR+QDFRD+E+ W+SKF++SIS N + +WSTP++V+
Sbjct: 504  MKATNEMLNYMRVIKFQAWEDHFNKRIQDFRDSEFGWISKFLYSISINTIVMWSTPLLVS 563

Query: 181  TLAFGTAMLLGFPLDAGTVFTATSLFKILQEPIWGFPQALISTSQAMISLGRLDGYLMSK 360
            TL FGTA+LLG PLDAGTVFT TS+FK+LQEPI  FPQA+IS SQAM+SL RLD Y++SK
Sbjct: 564  TLTFGTALLLGVPLDAGTVFTTTSIFKMLQEPIRVFPQAMISLSQAMVSLARLDCYMLSK 623

Query: 361  ELVEGAVEREEGCGEGIAIEVKDGMFAWDDDGGEIVLKILNLRIKK 498
            ELVE +VER + C   IA+EVK G+F+WDD+    VL  +NL IKK
Sbjct: 624  ELVEESVERVDACDGRIAVEVKGGIFSWDDEAKGEVLNNINLEIKK 669


>ref|XP_004136172.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus]
          Length = 1499

 Score =  220 bits (560), Expect = 1e-55
 Identities = 105/166 (63%), Positives = 134/166 (80%)
 Frame = +1

Query: 1   MKATSEMLNNMRVIKFQAWEEYFYKRVQDFRDAEYNWLSKFMFSISANFVFLWSTPVIVT 180
           MKAT+EMLNNMRVIKFQAWEE+F KR++ FR  E+ WLSKFM+S+S   + L   P +++
Sbjct: 501 MKATNEMLNNMRVIKFQAWEEHFQKRIETFRGTEFKWLSKFMYSVSTTMMVLGCAPALIS 560

Query: 181 TLAFGTAMLLGFPLDAGTVFTATSLFKILQEPIWGFPQALISTSQAMISLGRLDGYLMSK 360
           T+ FG A+LLG  LDAGTVFTA SLFK++QEPI  FPQ+LIS SQA+ISLGRLD +++S+
Sbjct: 561 TVTFGCAILLGIRLDAGTVFTAMSLFKLVQEPIRTFPQSLISLSQAVISLGRLDSFMLSR 620

Query: 361 ELVEGAVEREEGCGEGIAIEVKDGMFAWDDDGGEIVLKILNLRIKK 498
           EL E +VEREE C  GIA+EV+DG F+WDD+GGE VLK +N  ++K
Sbjct: 621 ELAEDSVEREERCDSGIAVEVRDGSFSWDDEGGE-VLKNINFNVRK 665


Top