BLASTX nr result

ID: Coptis25_contig00021003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021003
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17501.3| unnamed protein product [Vitis vinifera]              333   3e-89
ref|XP_002265804.1| PREDICTED: tubby-like F-box protein 5-like [...   333   3e-89
ref|XP_002521568.1| phosphoric diester hydrolase, putative [Rici...   323   5e-86
ref|XP_003537592.1| PREDICTED: tubby-like F-box protein 5-like [...   315   1e-83
ref|XP_002282152.1| PREDICTED: tubby-like F-box protein 5 isofor...   315   1e-83

>emb|CBI17501.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  333 bits (855), Expect = 3e-89
 Identities = 171/250 (68%), Positives = 202/250 (80%), Gaps = 11/250 (4%)
 Frame = -3

Query: 717 MSLKNIFREFREKKDGNGN--------KHGR--SRSEITP-VGPRFRNGSVQQSRWANLP 571
           MS K+I RE +E KDG GN        KH R  +RS I P  GP   +G++QQ +WANLP
Sbjct: 1   MSFKSIVRELKEMKDGIGNISRRGVEGKHWRRRTRSYIAPDQGPL--SGALQQGQWANLP 58

Query: 570 PELLLDVIKRLEASQTCWPARRHVVACASVCKSWRDITKEVVKTPEECGRLTFPISLKQP 391
           PELLLD+I+R+E S+T WPAR  VV CASVC+SWR+ITKE+VKTPEECGRLTFPISLKQP
Sbjct: 59  PELLLDIIQRVEESETSWPARNVVVFCASVCRSWREITKEIVKTPEECGRLTFPISLKQP 118

Query: 390 GPRDSPIHCFIRRERGTNTYRLYLGLTPALLGENGKLLLAAKKIRKTTRTEFVISLVADD 211
           GPRDSPI CFIRR+R T+TY LY GLTP+  G++ KLLLAA++IR+ T T+FVISLVADD
Sbjct: 119 GPRDSPIQCFIRRDRATSTYLLYFGLTPS-EGQSDKLLLAARRIRRPTSTDFVISLVADD 177

Query: 210 FSRVSNTYLGKLRSNFLGTKFTVYDNQPPYEVDVPSSSRTHRRIHSKQVSPRVPAGNYNI 31
           FSR SNTY+GKLRSNFLGTKFT+YD+QPPY+  V  +SR+ RR HSKQVSPRVPA NY++
Sbjct: 178 FSRASNTYVGKLRSNFLGTKFTIYDSQPPYDTAVQPNSRSSRRFHSKQVSPRVPACNYSV 237

Query: 30  GTIGYELNVL 1
            TI YELNVL
Sbjct: 238 ATISYELNVL 247


>ref|XP_002265804.1| PREDICTED: tubby-like F-box protein 5-like [Vitis vinifera]
          Length = 413

 Score =  333 bits (855), Expect = 3e-89
 Identities = 171/250 (68%), Positives = 202/250 (80%), Gaps = 11/250 (4%)
 Frame = -3

Query: 717 MSLKNIFREFREKKDGNGN--------KHGR--SRSEITP-VGPRFRNGSVQQSRWANLP 571
           MS K+I RE +E KDG GN        KH R  +RS I P  GP   +G++QQ +WANLP
Sbjct: 1   MSFKSIVRELKEMKDGIGNISRRGVEGKHWRRRTRSYIAPDQGPL--SGALQQGQWANLP 58

Query: 570 PELLLDVIKRLEASQTCWPARRHVVACASVCKSWRDITKEVVKTPEECGRLTFPISLKQP 391
           PELLLD+I+R+E S+T WPAR  VV CASVC+SWR+ITKE+VKTPEECGRLTFPISLKQP
Sbjct: 59  PELLLDIIQRVEESETSWPARNVVVFCASVCRSWREITKEIVKTPEECGRLTFPISLKQP 118

Query: 390 GPRDSPIHCFIRRERGTNTYRLYLGLTPALLGENGKLLLAAKKIRKTTRTEFVISLVADD 211
           GPRDSPI CFIRR+R T+TY LY GLTP+  G++ KLLLAA++IR+ T T+FVISLVADD
Sbjct: 119 GPRDSPIQCFIRRDRATSTYLLYFGLTPS-EGQSDKLLLAARRIRRPTSTDFVISLVADD 177

Query: 210 FSRVSNTYLGKLRSNFLGTKFTVYDNQPPYEVDVPSSSRTHRRIHSKQVSPRVPAGNYNI 31
           FSR SNTY+GKLRSNFLGTKFT+YD+QPPY+  V  +SR+ RR HSKQVSPRVPA NY++
Sbjct: 178 FSRASNTYVGKLRSNFLGTKFTIYDSQPPYDTAVQPNSRSSRRFHSKQVSPRVPACNYSV 237

Query: 30  GTIGYELNVL 1
            TI YELNVL
Sbjct: 238 ATISYELNVL 247


>ref|XP_002521568.1| phosphoric diester hydrolase, putative [Ricinus communis]
           gi|223539246|gb|EEF40839.1| phosphoric diester
           hydrolase, putative [Ricinus communis]
          Length = 414

 Score =  323 bits (827), Expect = 5e-86
 Identities = 163/249 (65%), Positives = 196/249 (78%), Gaps = 10/249 (4%)
 Frame = -3

Query: 717 MSLKNIFREFREKKDGNGN--------KH--GRSRSEITPVGPRFRNGSVQQSRWANLPP 568
           MSLK+I RE RE KDG G+        KH  GR+RS I P      +  +QQ +WANLPP
Sbjct: 1   MSLKSIVRELREMKDGIGSISRRGVEGKHWRGRTRSHIAPDETPPDSEPIQQGQWANLPP 60

Query: 567 ELLLDVIKRLEASQTCWPARRHVVACASVCKSWRDITKEVVKTPEECGRLTFPISLKQPG 388
           ELLLD+I+R+E S+T WPAR  VV CA VC+SWR++TKE+VKTPE+CGRLTFPISLKQPG
Sbjct: 61  ELLLDIIRRVEESETLWPARAVVVYCALVCRSWREVTKEIVKTPEQCGRLTFPISLKQPG 120

Query: 387 PRDSPIHCFIRRERGTNTYRLYLGLTPALLGENGKLLLAAKKIRKTTRTEFVISLVADDF 208
           PR+SPI CFIRRE  T+TY LY GL P+   E+ KLLLAA+KIR+ T T+F++SL ADDF
Sbjct: 121 PRESPIQCFIRRETATSTYLLYYGLVPS-ENESDKLLLAARKIRRATCTDFIVSLAADDF 179

Query: 207 SRVSNTYLGKLRSNFLGTKFTVYDNQPPYEVDVPSSSRTHRRIHSKQVSPRVPAGNYNIG 28
           SR SNTY+GKLRSNFLGTKFTV+D+QP  EV +  +SRTHRR HS+QVSP++PA NY+IG
Sbjct: 180 SRASNTYVGKLRSNFLGTKFTVFDSQPTCEVPIQPASRTHRRFHSRQVSPKLPACNYSIG 239

Query: 27  TIGYELNVL 1
           TI YELNVL
Sbjct: 240 TITYELNVL 248


>ref|XP_003537592.1| PREDICTED: tubby-like F-box protein 5-like [Glycine max]
          Length = 414

 Score =  315 bits (806), Expect = 1e-83
 Identities = 158/249 (63%), Positives = 188/249 (75%), Gaps = 10/249 (4%)
 Frame = -3

Query: 717 MSLKNIFREFREKKDGNGNK----------HGRSRSEITPVGPRFRNGSVQQSRWANLPP 568
           MSLK+I RE +E +DG G+           +GR++S + P         +QQ  WANLPP
Sbjct: 1   MSLKSIVRELKEMRDGIGSMSRRGVESRRWNGRTKSHVAPDVTLTSLEPIQQGHWANLPP 60

Query: 567 ELLLDVIKRLEASQTCWPARRHVVACASVCKSWRDITKEVVKTPEECGRLTFPISLKQPG 388
           ELLLD+I+R+E S+T WPAR  VV C SVCKSWR +TKE+VKTPE+CGRLTFPISLKQPG
Sbjct: 61  ELLLDIIRRVEDSETTWPARAVVVYCGSVCKSWRAVTKEIVKTPEQCGRLTFPISLKQPG 120

Query: 387 PRDSPIHCFIRRERGTNTYRLYLGLTPALLGENGKLLLAAKKIRKTTRTEFVISLVADDF 208
           PRDSPI CFIRR R T+TY LY+GL P+   E  KLLLAAKK+R+ T T+F+ISLVADDF
Sbjct: 121 PRDSPIQCFIRRNRETSTYLLYIGLVPS-ENETDKLLLAAKKVRRATGTDFIISLVADDF 179

Query: 207 SRVSNTYLGKLRSNFLGTKFTVYDNQPPYEVDVPSSSRTHRRIHSKQVSPRVPAGNYNIG 28
           SR SNTY+GKLRSNFLGTKFT+YD+QPP+   +   S+  RR HSKQVSPRVPA NY + 
Sbjct: 180 SRSSNTYVGKLRSNFLGTKFTIYDSQPPHGAAIQPDSQPSRRFHSKQVSPRVPACNYVVS 239

Query: 27  TIGYELNVL 1
           TI YELNVL
Sbjct: 240 TIAYELNVL 248


>ref|XP_002282152.1| PREDICTED: tubby-like F-box protein 5 isoform 1 [Vitis vinifera]
          Length = 416

 Score =  315 bits (806), Expect = 1e-83
 Identities = 157/250 (62%), Positives = 194/250 (77%), Gaps = 11/250 (4%)
 Frame = -3

Query: 717 MSLKNIFREFREKKDGNGN--------KHG--RSRSEITPVG-PRFRNGSVQQSRWANLP 571
           M  K+I RE R+ +D  GN        KH   R RS I P G P       QQS+WAN+P
Sbjct: 1   MHFKSIVRELRDMRDSIGNSSRRRAEGKHTNRRGRSHIAPEGSPSSSALFQQQSQWANMP 60

Query: 570 PELLLDVIKRLEASQTCWPARRHVVACASVCKSWRDITKEVVKTPEECGRLTFPISLKQP 391
           PELLLD+I+R+EA++  WPARR VV+C SVC+SWRDITKE+VKTPE+CG LTFPISLKQP
Sbjct: 61  PELLLDIIQRVEAAEASWPARRDVVSCGSVCRSWRDITKEIVKTPEQCGCLTFPISLKQP 120

Query: 390 GPRDSPIHCFIRRERGTNTYRLYLGLTPALLGENGKLLLAAKKIRKTTRTEFVISLVADD 211
           GPR+S I CFI+RER T+T+RLYLGL+PAL G+  KLLLAA+KIR+ T TEFVISL+ DD
Sbjct: 121 GPRESQIQCFIKRERATSTFRLYLGLSPALSGDASKLLLAARKIRRATSTEFVISLLGDD 180

Query: 210 FSRVSNTYLGKLRSNFLGTKFTVYDNQPPYEVDVPSSSRTHRRIHSKQVSPRVPAGNYNI 31
           FSR +N Y+GKL+SNFLGTKFT+YD+QPP++  V S+ +++ R+HSKQ S R P+GNYN+
Sbjct: 181 FSRATNAYVGKLKSNFLGTKFTIYDSQPPHDPAVQSNCQSNGRLHSKQGSTRSPSGNYNV 240

Query: 30  GTIGYELNVL 1
            TI YELNVL
Sbjct: 241 ATISYELNVL 250


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