BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020995
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indi...   115   8e-24
gb|AAX94970.1| retrotransposon protein, putative, unclassified [...   112   5e-23
gb|EEE62189.1| hypothetical protein OsJ_16976 [Oryza sativa Japo...   112   5e-23
emb|CAH66131.1| OSIGBa0135L04.5 [Oryza sativa Indica Group]           112   5e-23
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   112   8e-23

>gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indica Group]
          Length = 666

 Score =  115 bits (288), Expect = 8e-24
 Identities = 77/225 (34%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
 Frame = -3

Query: 664 NAGGLGVKNLDIQNLALLGKKAWDLLHQN-SLWAKYMKDKYFPNVDFWXXXXXXXXXXAW 488
           NAGGLG +++   N ALL ++AW L+    SL A+ +K KY+PN               W
Sbjct: 203 NAGGLGFRDMKAFNQALLARQAWRLIDNPVSLCARVLKAKYYPNGCLMDTVFSGNASPTW 262

Query: 487 KVMHNLRNLLSFGVAWHIGDGLSVRAWLDAWVTGTPLELPLIQKPYNCILDRVADFIDPV 308
           + + +   LL  G+ W IG+G  VR W D W+  +     +I     C +  VAD +D  
Sbjct: 263 RAIEHGLELLKEGLVWRIGNGTRVRIWRDPWIPRSSTR-KVITSQGRCRIKWVADLLD-A 320

Query: 307 NRRWNTQLVRQ-YWPMEYADRILTIPLKIHATQDSRYWAPHHKGCYTVKSAYRMLQGWID 131
           N  WN QLVRQ + PM+ AD IL+I        D   W     G +TVK+AYR+      
Sbjct: 321 NTNWNEQLVRQIFLPMD-ADAILSIRTSRQGEDDFLAWHLEKSGIFTVKTAYRLAIENKL 379

Query: 130 PSKYHN---------KKIFASIWKCKVAYKIRYCMWQGAQEVIPT 23
            SK  N         K ++ +IW C V  K+R   W+ A + + T
Sbjct: 380 NSKNSNASGSSIEGSKSLWNTIWSCPVPPKVRIFAWRVASDCLAT 424


>gb|AAX94970.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77550533|gb|ABA93330.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 816

 Score =  112 bits (281), Expect = 5e-23
 Identities = 72/222 (32%), Positives = 106/222 (47%), Gaps = 10/222 (4%)
 Frame = -3

Query: 658 GGLGVKNLDIQNLALLGKKAWDLLH-QNSLWAKYMKDKYFPNVDFWXXXXXXXXXXAWKV 482
           GG+G K+L I N ALL ++AW L+   +SL AK MK +YFPN               W+ 
Sbjct: 121 GGIGFKDLKIFNQALLARQAWRLIQFLDSLCAKLMKARYFPNGHLIDTVFPTDSSEVWRG 180

Query: 481 MHNLRNLLSFGVAWHIGDGLSVRAWLDAWVTGTPLELPLIQKPYNCILDRVADFIDPVNR 302
           + +   LL  G+ W IG G  +  W D W+     +L +  K     L  VAD + P N+
Sbjct: 181 ICHGLELLKKGIIWRIGKGDQLHIWRDNWIPRDH-QLRVTGKRTRTCLKWVADLVSPNNQ 239

Query: 301 RWNTQLVRQYWPMEYADRILTIPLKIHATQDSRYWAPHHKGCYTVKSAYRM--------- 149
            W+  L+RQ +   Y D IL I L    T D   W P   G +TV+SAY++         
Sbjct: 240 EWDEGLIRQIFYPPYVDEILKIKLPESPTDDFLAWHPERLGVFTVRSAYKLGLAEEHRAN 299

Query: 148 LQGWIDPSKYHNKKIFASIWKCKVAYKIRYCMWQGAQEVIPT 23
             G    +   ++ ++ +IW  +V  K+    W+ A E +PT
Sbjct: 300 EAGACSSNGNGDRVLWKNIWSAQVPQKVCIFAWRLAVERLPT 341


>gb|EEE62189.1| hypothetical protein OsJ_16976 [Oryza sativa Japonica Group]
          Length = 653

 Score =  112 bits (281), Expect = 5e-23
 Identities = 72/222 (32%), Positives = 106/222 (47%), Gaps = 10/222 (4%)
 Frame = -3

Query: 658 GGLGVKNLDIQNLALLGKKAWDLLH-QNSLWAKYMKDKYFPNVDFWXXXXXXXXXXAWKV 482
           GG+G K+L I N ALL ++AW L+   +SL AK MK +YFPN               W+ 
Sbjct: 121 GGIGFKDLKIFNQALLARQAWRLIQFLDSLCAKLMKARYFPNGHLIDTVFPTDSSEVWRG 180

Query: 481 MHNLRNLLSFGVAWHIGDGLSVRAWLDAWVTGTPLELPLIQKPYNCILDRVADFIDPVNR 302
           + +   LL  G+ W IG G  +  W D W+     +L +  K     L  VAD + P N+
Sbjct: 181 ICHGLELLKKGIIWRIGKGDQLHIWRDNWIPRDH-QLRVTGKRTRTCLKWVADLVSPNNQ 239

Query: 301 RWNTQLVRQYWPMEYADRILTIPLKIHATQDSRYWAPHHKGCYTVKSAYRM--------- 149
            W+  L+RQ +   Y D IL I L    T D   W P   G +TV+SAY++         
Sbjct: 240 EWDEGLIRQIFYPPYVDEILKIKLPESPTDDFLAWHPERLGVFTVRSAYKLGLAEEHRAN 299

Query: 148 LQGWIDPSKYHNKKIFASIWKCKVAYKIRYCMWQGAQEVIPT 23
             G    +   ++ ++ +IW  +V  K+    W+ A E +PT
Sbjct: 300 EAGACSSNGNGDRVLWKNIWSAQVPQKVCIFAWRLAVERLPT 341


>emb|CAH66131.1| OSIGBa0135L04.5 [Oryza sativa Indica Group]
          Length = 611

 Score =  112 bits (281), Expect = 5e-23
 Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 8/222 (3%)
 Frame = -3

Query: 658 GGLGVKNLDIQNLALLGKKAWDLLHQ-NSLWAKYMKDKYFPNVDFWXXXXXXXXXXAWKV 482
           GGLG ++  + N ALL ++AW L+ +  SL A+ ++ KY+P+               W+ 
Sbjct: 92  GGLGFRDFRLFNQALLARQAWRLIDRPKSLCARVLRAKYYPSGSLIDTAFGGNASPGWRA 151

Query: 481 MHNLRNLLSFGVAWHIGDGLSVRAWLDAWVTGTPLELPLIQKPYNCILDRVADFIDPVNR 302
           +     LL  G+ W +G+G S+R W D W+       P+  +  NC    VAD +  V+ 
Sbjct: 152 IEYGLELLKKGIIWRVGNGHSIRIWRDPWLPRNHSRRPITVRG-NCRTKWVADLMG-VDG 209

Query: 301 RWNTQLVRQ-YWPMEYADRILTIPLKIHATQDSRYWAPHHKGCYTVKSAYRM------LQ 143
            W+ Q+V++ +WPM+ A+ ILTI L   A +D   W P   G ++V+SAY++      + 
Sbjct: 210 TWDEQVVKRIFWPMD-AELILTIRLSARAEEDFLAWHPDKWGVFSVRSAYKLALQLAAID 268

Query: 142 GWIDPSKYHNKKIFASIWKCKVAYKIRYCMWQGAQEVIPTSD 17
                S+    K +  +WKC V  K++   W+ A   + T +
Sbjct: 269 NGSGSSEAETSKAWNLVWKCNVPQKVKVFTWRAATNSLATME 310


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  112 bits (279), Expect = 8e-23
 Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 20/238 (8%)
 Frame = -3

Query: 658  GGLGVKNLDIQNLALLGKKAWDLLHQ-NSLWAKYMKDKYFPNVDFWXXXXXXXXXXAWKV 482
            GG+G +     N A+LG++ W LL   +SL ++ +K +YFPN  FW           W+ 
Sbjct: 866  GGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRS 925

Query: 481  MHNLRNLLSFGVAWHIGDGLSVRAWLDAWVTGTPLELPLIQKPY------NCILDRVADF 320
            +   R LL+ GV W +GDG +++ + D W+ G   +L     P+      +C+++  A  
Sbjct: 926  LLFGRELLAKGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDATVSCLMNEDA-- 983

Query: 319  IDPVNRRWNTQLVRQYWPMEYADRILTIPLKIHATQDSRYWAPHHK-GCYTVKSAYRMLQ 143
                 R W+  L+R  +P++ A  IL IP+  H   D   W PH K G Y+V+SAY + +
Sbjct: 984  -----RCWDGDLIRSLFPVDIAKEILQIPISRHGDADFASW-PHDKLGLYSVRSAYNLAR 1037

Query: 142  G---WIDPSK---------YHNKKIFASIWKCKVAYKIRYCMWQGAQEVIPTSDFLLR 5
                + D S            ++K +  +WK     K++  +W+ A E + T  F LR
Sbjct: 1038 SEAFFADQSNSGRGMASRLLESQKDWKGLWKINAPGKMKITLWRAAHECLATG-FQLR 1094