BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020994
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    62   6e-08
emb|CAH66131.1| OSIGBa0135L04.5 [Oryza sativa Indica Group]            57   2e-06

>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
 Frame = -3

Query: 298 WNTQLVRQYWPMEYADRILTIPLKIDATQDSRYWAPHHKGCYTVKSFYRMLQGWIDP-SK 122
           WN Q+V   +  + A  IL+IPL      D+R W     G YTVKS YR+    + P   
Sbjct: 49  WNQQIVTSIFNPQDAAAILSIPLHNRLLSDTRIWKTTTTGNYTVKSAYRICSDLLHPHDS 108

Query: 121 YHNKKKIAFIWKCNVAYKIRYCLWQGAQEVIPT 23
            HN      IW  N+ +++R  LW+ A   +PT
Sbjct: 109 AHNNSSWMNIWNLNIPHRVRAFLWRLAHNCLPT 141


>emb|CAH66131.1| OSIGBa0135L04.5 [Oryza sativa Indica Group]
          Length = 611

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
 Frame = -3

Query: 298 WNTQLVRQ-YWPMEYADRILTIPLKIDATQDSRYWAPHHKGCYTVKSFYRM------LQG 140
           W+ Q+V++ +WPM+ A+ ILTI L   A +D   W P   G ++V+S Y++      +  
Sbjct: 211 WDEQVVKRIFWPMD-AELILTIRLSARAEEDFLAWHPDKWGVFSVRSAYKLALQLAAIDN 269

Query: 139 WIDPSKYHNKKKIAFIWKCNVAYKIRYCLWQGAQEVIPTSD 17
               S+    K    +WKCNV  K++   W+ A   + T +
Sbjct: 270 GSGSSEAETSKAWNLVWKCNVPQKVKVFTWRAATNSLATME 310