BLASTX nr result

ID: Coptis25_contig00020993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020993
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU52640.1| beta-1,3-glucanase 5 [Solanum tuberosum]               180   1e-43
ref|XP_002302861.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-42
ref|XP_002333242.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_002525335.1| Glucan endo-1,3-beta-glucosidase precursor, ...   175   3e-42
ref|XP_002274828.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   173   1e-41

>gb|AFU52640.1| beta-1,3-glucanase 5 [Solanum tuberosum]
          Length = 477

 Score =  180 bits (456), Expect = 1e-43
 Identities = 88/132 (66%), Positives = 109/132 (82%), Gaps = 5/132 (3%)
 Frame = -2

Query: 383 MDRLTIFLCFISIFI-----LADAGQIGVNYGRVANNLPSAVKVVQLLKSQGIERVKLYD 219
           M++LTI L   +  +     +ADAG IG+NYGRVANNLPSAVKV+ LLKSQG+ERVK+YD
Sbjct: 1   MEKLTICLLLFAFSLSLFSSIADAGSIGINYGRVANNLPSAVKVIALLKSQGVERVKVYD 60

Query: 218 TDPSVLKALAGSNIEVTVALPNELLYSVSKTKSLAFKWVQKNILSYYPSTQIHAIAVGNE 39
           TDP+VLKAL+GS+I+VTV LPNELLY+ +K  S A+ WV+KN+ +YYPSTQI +IAVGNE
Sbjct: 61  TDPAVLKALSGSDIKVTVNLPNELLYNAAKRPSFAYSWVEKNVAAYYPSTQIESIAVGNE 120

Query: 38  VFADPNNTTNFL 3
           VF DP+NTT FL
Sbjct: 121 VFVDPHNTTRFL 132


>ref|XP_002302861.1| predicted protein [Populus trichocarpa] gi|222844587|gb|EEE82134.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/124 (69%), Positives = 102/124 (82%)
 Frame = -2

Query: 374 LTIFLCFISIFILADAGQIGVNYGRVANNLPSAVKVVQLLKSQGIERVKLYDTDPSVLKA 195
           L+ FL  + IF  ADAG IGVNYGR+ANNLP+A KVVQL+KSQG+ER+K+YDTDP VLKA
Sbjct: 6   LSSFLVLVCIFTSADAGSIGVNYGRIANNLPAAAKVVQLVKSQGLERIKVYDTDPIVLKA 65

Query: 194 LAGSNIEVTVALPNELLYSVSKTKSLAFKWVQKNILSYYPSTQIHAIAVGNEVFADPNNT 15
           L+G  I+VTV LPNELLYS +K    A  WVQKN+++Y+PSTQI AIAVGNEVF DP+NT
Sbjct: 66  LSGCGIKVTVDLPNELLYSAAKNPYFARTWVQKNVVAYHPSTQIEAIAVGNEVFVDPHNT 125

Query: 14  TNFL 3
           T FL
Sbjct: 126 TKFL 129


>ref|XP_002333242.1| predicted protein [Populus trichocarpa]
           gi|224129034|ref|XP_002320484.1| predicted protein
           [Populus trichocarpa] gi|118480997|gb|ABK92452.1|
           unknown [Populus trichocarpa]
           gi|222835778|gb|EEE74213.1| predicted protein [Populus
           trichocarpa] gi|222861257|gb|EEE98799.1| predicted
           protein [Populus trichocarpa]
          Length = 470

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/124 (68%), Positives = 103/124 (83%)
 Frame = -2

Query: 374 LTIFLCFISIFILADAGQIGVNYGRVANNLPSAVKVVQLLKSQGIERVKLYDTDPSVLKA 195
           L  FL  + +   ADAG +GVNYGR+ANNLPSAVKVV L+KSQG+ERVK+YDTDP+VLKA
Sbjct: 6   LPCFLLLLCVVAFADAGSVGVNYGRIANNLPSAVKVVNLVKSQGLERVKVYDTDPAVLKA 65

Query: 194 LAGSNIEVTVALPNELLYSVSKTKSLAFKWVQKNILSYYPSTQIHAIAVGNEVFADPNNT 15
           L+GS I+VTV LPN+LLYS +K  + A  WVQKNI++Y+PSTQI +IAVGNEVF DP+NT
Sbjct: 66  LSGSGIKVTVDLPNQLLYSAAKYPNFARSWVQKNIVAYHPSTQIESIAVGNEVFVDPHNT 125

Query: 14  TNFL 3
           T FL
Sbjct: 126 TKFL 129


>ref|XP_002525335.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223535394|gb|EEF37068.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 495

 Score =  175 bits (444), Expect = 3e-42
 Identities = 84/124 (67%), Positives = 102/124 (82%)
 Frame = -2

Query: 374 LTIFLCFISIFILADAGQIGVNYGRVANNLPSAVKVVQLLKSQGIERVKLYDTDPSVLKA 195
           ++  L  +S F  ADAG IGVNYGR+A+NLPSA KVVQLLKSQG++RVK++D DP+VLKA
Sbjct: 6   ISSLLLLLSTFTFADAGSIGVNYGRIADNLPSATKVVQLLKSQGLQRVKVFDADPAVLKA 65

Query: 194 LAGSNIEVTVALPNELLYSVSKTKSLAFKWVQKNILSYYPSTQIHAIAVGNEVFADPNNT 15
           L+G+ I+VTV LPNELLYS +K  S AF WVQ+N+  YYPST+I AIAVGNEVF DP+NT
Sbjct: 66  LSGTRIKVTVDLPNELLYSAAKRPSFAFSWVQRNVAVYYPSTEIEAIAVGNEVFVDPHNT 125

Query: 14  TNFL 3
           T FL
Sbjct: 126 TKFL 129


>ref|XP_002274828.1| PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Vitis vinifera]
          Length = 471

 Score =  173 bits (439), Expect = 1e-41
 Identities = 87/118 (73%), Positives = 99/118 (83%)
 Frame = -2

Query: 365 FLCFISIFILADAGQIGVNYGRVANNLPSAVKVVQLLKSQGIERVKLYDTDPSVLKALAG 186
           FL  ISIF  ADAG IGVNYGR+ANNLPSAVKVVQLLKSQGIERVK++DTDP+VLKAL  
Sbjct: 9   FLLVISIFAFADAGSIGVNYGRIANNLPSAVKVVQLLKSQGIERVKVFDTDPAVLKALGE 68

Query: 185 SNIEVTVALPNELLYSVSKTKSLAFKWVQKNILSYYPSTQIHAIAVGNEVFADPNNTT 12
           S I+VTV LPNELL S +K +S A  WVQKN+  Y+P+T+I AIAVGNEVF DP+NTT
Sbjct: 69  SGIKVTVDLPNELLISAAKRQSFANTWVQKNVADYFPATKIEAIAVGNEVFVDPHNTT 126


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