BLASTX nr result

ID: Coptis25_contig00020987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020987
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311428.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
emb|CBI27081.3| unnamed protein product [Vitis vinifera]              123   3e-26
ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242...   123   3e-26
emb|CAN78722.1| hypothetical protein VITISV_020005 [Vitis vinifera]   123   3e-26
ref|XP_002315966.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26

>ref|XP_002311428.1| predicted protein [Populus trichocarpa] gi|222851248|gb|EEE88795.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score =  124 bits (312), Expect = 1e-26
 Identities = 66/107 (61%), Positives = 75/107 (70%), Gaps = 5/107 (4%)
 Frame = +3

Query: 3   GISRPVTTFTEEFDFTAMNEKFKKDEVWGDLGKANK-ESDSKHDGDVSYNSDNLGSVKLE 179
           G SRPVT FTE+FDF AMNEKFKKDEVWG LGK NK  S  + DG+ S   D+    + E
Sbjct: 480 GSSRPVTKFTEDFDFIAMNEKFKKDEVWGHLGKNNKSHSKDREDGNASGEDDSQDEDENE 539

Query: 180 ----KPVYVKDDFFDSISCTALENGRWKGRTKFSELRKLDSETFGDF 308
               +PVY KDDFFD+ISC AL N    GRT+FSE  KLD+ETFGDF
Sbjct: 540 LAKIEPVYNKDDFFDTISCNALGNDSQNGRTRFSEQMKLDTETFGDF 586


>emb|CBI27081.3| unnamed protein product [Vitis vinifera]
          Length = 564

 Score =  123 bits (308), Expect = 3e-26
 Identities = 66/110 (60%), Positives = 77/110 (70%), Gaps = 8/110 (7%)
 Frame = +3

Query: 3   GISRPVTTFTEEFDFTAMNEKFKKDEVWGDLGKANKES--DSKHDGDVS-----YNSDNL 161
           G SRPVT FTE+FDF AMNEKFKKDEVWG LGK NK    D + DG VS      + D+ 
Sbjct: 412 GGSRPVTKFTEDFDFMAMNEKFKKDEVWGHLGKGNKSQSRDKEVDGKVSDEDDYEDEDDA 471

Query: 162 GSVKLE-KPVYVKDDFFDSISCTALENGRWKGRTKFSELRKLDSETFGDF 308
              K E KP+Y KDDFFDS+SC AL++    GRT+FSE  K+D+ETFGDF
Sbjct: 472 ELPKFEVKPIYNKDDFFDSLSCNALDHDSHNGRTRFSEQMKIDTETFGDF 521


>ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242198 [Vitis vinifera]
          Length = 616

 Score =  123 bits (308), Expect = 3e-26
 Identities = 66/110 (60%), Positives = 77/110 (70%), Gaps = 8/110 (7%)
 Frame = +3

Query: 3   GISRPVTTFTEEFDFTAMNEKFKKDEVWGDLGKANKES--DSKHDGDVS-----YNSDNL 161
           G SRPVT FTE+FDF AMNEKFKKDEVWG LGK NK    D + DG VS      + D+ 
Sbjct: 464 GGSRPVTKFTEDFDFMAMNEKFKKDEVWGHLGKGNKSQSRDKEVDGKVSDEDDYEDEDDA 523

Query: 162 GSVKLE-KPVYVKDDFFDSISCTALENGRWKGRTKFSELRKLDSETFGDF 308
              K E KP+Y KDDFFDS+SC AL++    GRT+FSE  K+D+ETFGDF
Sbjct: 524 ELPKFEVKPIYNKDDFFDSLSCNALDHDSHNGRTRFSEQMKIDTETFGDF 573


>emb|CAN78722.1| hypothetical protein VITISV_020005 [Vitis vinifera]
          Length = 665

 Score =  123 bits (308), Expect = 3e-26
 Identities = 66/110 (60%), Positives = 77/110 (70%), Gaps = 8/110 (7%)
 Frame = +3

Query: 3   GISRPVTTFTEEFDFTAMNEKFKKDEVWGDLGKANKES--DSKHDGDVS-----YNSDNL 161
           G SRPVT FTE+FDF AMNEKFKKDEVWG LGK NK    D + DG VS      + D+ 
Sbjct: 513 GGSRPVTKFTEDFDFMAMNEKFKKDEVWGHLGKGNKSQSRDKEVDGKVSDEDDYEDEDDA 572

Query: 162 GSVKLE-KPVYVKDDFFDSISCTALENGRWKGRTKFSELRKLDSETFGDF 308
              K E KP+Y KDDFFDS+SC AL++    GRT+FSE  K+D+ETFGDF
Sbjct: 573 ELPKFEVKPIYNKDDFFDSLSCNALDHDSHNGRTRFSEQMKIDTETFGDF 622


>ref|XP_002315966.1| predicted protein [Populus trichocarpa] gi|222865006|gb|EEF02137.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  122 bits (307), Expect = 4e-26
 Identities = 67/110 (60%), Positives = 76/110 (69%), Gaps = 8/110 (7%)
 Frame = +3

Query: 3   GISRPVTTFTEEFDFTAMNEKFKKDEVWGDLGKANK-ESDSKHDGDVS-------YNSDN 158
           G SRP+T FTE+FDF AMNEKFKKDEVWG LGK NK  S  + DGDVS        + D 
Sbjct: 475 GSSRPLTKFTEDFDFMAMNEKFKKDEVWGHLGKNNKSHSKDREDGDVSGEDDFQDEDEDE 534

Query: 159 LGSVKLEKPVYVKDDFFDSISCTALENGRWKGRTKFSELRKLDSETFGDF 308
           L  V+  KPVY KDDFFD+ISC A +     GRT+FSE  KLD+ETFGDF
Sbjct: 535 LAKVE-AKPVYNKDDFFDTISCNARDLESQNGRTRFSEQMKLDTETFGDF 583


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