BLASTX nr result

ID: Coptis25_contig00020985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020985
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308145.1| histone 2 [Populus trichocarpa] gi|222854121...   176   5e-42
gb|ABK94574.1| unknown [Populus trichocarpa]                          176   5e-42
ref|XP_003547405.1| PREDICTED: histone H2A-like [Glycine max]         175   7e-42
ref|NP_001235555.1| uncharacterized protein LOC100305705 [Glycin...   175   9e-42
ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 ...   175   9e-42

>ref|XP_002308145.1| histone 2 [Populus trichocarpa] gi|222854121|gb|EEE91668.1| histone
           2 [Populus trichocarpa]
          Length = 136

 Score =  176 bits (445), Expect = 5e-42
 Identities = 90/121 (74%), Positives = 96/121 (79%)
 Frame = +2

Query: 158 LQFPVGRLGRYLKKGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRH 337
           LQFPVGR+GRYLKKGRY+QRVGSGAP                  GNAARDNKKNRIIPRH
Sbjct: 19  LQFPVGRIGRYLKKGRYSQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRH 78

Query: 338 VLLAIRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNDKADKVEKAPKSPSKGTRSPKK 517
           VLLA+RNDEELGKLLAGVTIAHGGVLPNINP+LLPKK +KA    K PKSPSK T+SPKK
Sbjct: 79  VLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTEKA---AKEPKSPSKATKSPKK 135

Query: 518 A 520
           A
Sbjct: 136 A 136


>gb|ABK94574.1| unknown [Populus trichocarpa]
          Length = 149

 Score =  176 bits (445), Expect = 5e-42
 Identities = 90/121 (74%), Positives = 96/121 (79%)
 Frame = +2

Query: 158 LQFPVGRLGRYLKKGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRH 337
           LQFPVGR+GRYLKKGRY+QRVGSGAP                  GNAARDNKKNRIIPRH
Sbjct: 32  LQFPVGRIGRYLKKGRYSQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRH 91

Query: 338 VLLAIRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNDKADKVEKAPKSPSKGTRSPKK 517
           VLLA+RNDEELGKLLAGVTIAHGGVLPNINP+LLPKK +KA    K PKSPSK T+SPKK
Sbjct: 92  VLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTEKA---AKEPKSPSKATKSPKK 148

Query: 518 A 520
           A
Sbjct: 149 A 149


>ref|XP_003547405.1| PREDICTED: histone H2A-like [Glycine max]
          Length = 149

 Score =  175 bits (444), Expect = 7e-42
 Identities = 89/121 (73%), Positives = 97/121 (80%)
 Frame = +2

Query: 158 LQFPVGRLGRYLKKGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRH 337
           LQFPVGR+GRYLKKGRYAQRVG+GAP                  GNAARDNKKNRIIPRH
Sbjct: 32  LQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRH 91

Query: 338 VLLAIRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNDKADKVEKAPKSPSKGTRSPKK 517
           VLLA+RNDEELGKLLAGVTIAHGGVLPNINP+LLPKK+++A    K PKSPSK T+SPKK
Sbjct: 92  VLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSERA---SKEPKSPSKATKSPKK 148

Query: 518 A 520
           A
Sbjct: 149 A 149


>ref|NP_001235555.1| uncharacterized protein LOC100305705 [Glycine max]
           gi|356558240|ref|XP_003547415.1| PREDICTED: histone
           H2A-like isoform 1 [Glycine max]
           gi|255626369|gb|ACU13529.1| unknown [Glycine max]
          Length = 149

 Score =  175 bits (443), Expect = 9e-42
 Identities = 89/121 (73%), Positives = 96/121 (79%)
 Frame = +2

Query: 158 LQFPVGRLGRYLKKGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRH 337
           LQFPVGR+GRYLKKGRYAQRVG+GAP                  GNAARDNKKNRIIPRH
Sbjct: 32  LQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRH 91

Query: 338 VLLAIRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNDKADKVEKAPKSPSKGTRSPKK 517
           VLLA+RNDEELGKLLAGVTIAHGGVLPNINP+LLPKK ++A    K PKSPSK T+SPKK
Sbjct: 92  VLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTERA---SKEPKSPSKATKSPKK 148

Query: 518 A 520
           A
Sbjct: 149 A 149


>ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 [Vitis vinifera]
           gi|147841321|emb|CAN60181.1| hypothetical protein
           VITISV_014244 [Vitis vinifera]
           gi|297746122|emb|CBI16178.3| unnamed protein product
           [Vitis vinifera]
          Length = 149

 Score =  175 bits (443), Expect = 9e-42
 Identities = 89/121 (73%), Positives = 96/121 (79%)
 Frame = +2

Query: 158 LQFPVGRLGRYLKKGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRH 337
           LQFPVGR+GRYLKKGRY+QRVG+GAP                  GNAARDNKKNRIIPRH
Sbjct: 32  LQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRH 91

Query: 338 VLLAIRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNDKADKVEKAPKSPSKGTRSPKK 517
           VLLA+RNDEELGKLL+GVTIAHGGVLPNINP+LLPKK DKA    K PKSPSK T+SPKK
Sbjct: 92  VLLAVRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKTDKA---TKEPKSPSKATKSPKK 148

Query: 518 A 520
           A
Sbjct: 149 A 149


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