BLASTX nr result
ID: Coptis25_contig00020980
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00020980
(895 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|2... 323 e-118
ref|XP_002521428.1| beta-galactosidase, putative [Ricinus commun... 324 e-114
gb|ABK24373.1| unknown [Picea sitchensis] 276 1e-93
ref|XP_003558321.1| PREDICTED: LOW QUALITY PROTEIN: beta-galacto... 277 1e-93
dbj|BAJ89450.1| predicted protein [Hordeum vulgare subsp. vulgare] 278 1e-93
>ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|222860304|gb|EEE97851.1|
predicted protein [Populus trichocarpa]
Length = 849
Score = 323 bits (828), Expect(2) = e-118
Identities = 148/176 (84%), Positives = 157/176 (89%)
Frame = +3
Query: 3 NTCNGFYCDEFTPNSPSKPKMWTENYVGWFLAFGYAHPFRPDEDLAFAVTRFFGKGGTFQ 182
NTCNGFYCD+FTPNSPSKPKMWTENY GWFLAFGYA P+RP EDLAFAV RFF GG+FQ
Sbjct: 238 NTCNGFYCDQFTPNSPSKPKMWTENYSGWFLAFGYAVPYRPVEDLAFAVARFFEYGGSFQ 297
Query: 183 NYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLRDLHRAIKQCERYLVS 362
NYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLRDLH AIKQCE YLVS
Sbjct: 298 NYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLRDLHSAIKQCEEYLVS 357
Query: 363 SDPIFKKLGVNLEAHIYYKSPNNCAAFLSNVDKLLDANVTFNGRTYNLPAWSVSIL 530
SDP+ ++LG LEAH+YYK N+CAAFL+N D DANVTFNG TY LPAWSVSIL
Sbjct: 358 SDPVHQQLGNKLEAHVYYKHSNDCAAFLANYDSGSDANVTFNGNTYFLPAWSVSIL 413
Score = 128 bits (321), Expect(2) = e-118
Identities = 63/105 (60%), Positives = 78/105 (74%), Gaps = 1/105 (0%)
Frame = +1
Query: 583 AWSVSILPDCKNVVYNTAKIVSQRSLGHHLTTTRSLKD-ELPKASTWSWYKEKKGVQDKY 759
AWSVSIL DCKNV++NTAK+V+QR +G L + + D L AS WSWYKE+ G+
Sbjct: 407 AWSVSILADCKNVIFNTAKVVTQRHIGDALFSRSTTVDGNLVAASPWSWYKEEVGIWGNN 466
Query: 760 SFTSPSLLEQIKTTKDTSDFLWYTTSVIVKPGERKEVFLSVESLG 894
SFT P LLEQI TTKDTSDFLWY+TS+ V+ G+ KE L++ESLG
Sbjct: 467 SFTKPGLLEQINTTKDTSDFLWYSTSLYVEAGQDKEHLLNIESLG 511
>ref|XP_002521428.1| beta-galactosidase, putative [Ricinus communis]
gi|223539327|gb|EEF40918.1| beta-galactosidase, putative
[Ricinus communis]
Length = 841
Score = 324 bits (830), Expect(2) = e-114
Identities = 148/176 (84%), Positives = 158/176 (89%)
Frame = +3
Query: 3 NTCNGFYCDEFTPNSPSKPKMWTENYVGWFLAFGYAHPFRPDEDLAFAVTRFFGKGGTFQ 182
NTCNGFYCD F+PNSPSKPKMWTENY GWFL+FGYA P+RP EDLAFAV RFF GGTFQ
Sbjct: 232 NTCNGFYCDRFSPNSPSKPKMWTENYSGWFLSFGYAIPYRPVEDLAFAVARFFETGGTFQ 291
Query: 183 NYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLRDLHRAIKQCERYLVS 362
NYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLRDLH+AIKQCE +L+S
Sbjct: 292 NYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLRDLHKAIKQCEEHLIS 351
Query: 363 SDPIFKKLGVNLEAHIYYKSPNNCAAFLSNVDKLLDANVTFNGRTYNLPAWSVSIL 530
SDPI ++LG NLEAHIYYKS N+CAAFL+N D DANVTFNG Y LPAWSVSIL
Sbjct: 352 SDPIHQQLGNNLEAHIYYKSSNDCAAFLANYDSSSDANVTFNGNIYFLPAWSVSIL 407
Score = 114 bits (286), Expect(2) = e-114
Identities = 56/105 (53%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Frame = +1
Query: 583 AWSVSILPDCKNVVYNTAKIVSQRSLGHHLTTTRSLKDELP-KASTWSWYKEKKGVQDKY 759
AWSVSILPDCKNV++NTAK++ +LG + +E+P + WSWYKE+ G+
Sbjct: 401 AWSVSILPDCKNVIFNTAKVLIL-NLGDDFFAHSTSVNEIPLEQIVWSWYKEEVGIWGNN 459
Query: 760 SFTSPSLLEQIKTTKDTSDFLWYTTSVIVKPGERKEVFLSVESLG 894
SFT+P LLEQI TTKD SDFLWY+TS+ V + K++ L++ESLG
Sbjct: 460 SFTAPGLLEQINTTKDISDFLWYSTSISVNADQVKDIILNIESLG 504
>gb|ABK24373.1| unknown [Picea sitchensis]
Length = 861
Score = 276 bits (705), Expect(2) = 1e-93
Identities = 123/176 (69%), Positives = 142/176 (80%)
Frame = +3
Query: 3 NTCNGFYCDEFTPNSPSKPKMWTENYVGWFLAFGYAHPFRPDEDLAFAVTRFFGKGGTFQ 182
NTCNGFYCD FTPNSP+KPKMWTEN+ GWFL+FG PFRP EDLAF+V RFF +GGTFQ
Sbjct: 233 NTCNGFYCDAFTPNSPNKPKMWTENWSGWFLSFGGRLPFRPTEDLAFSVARFFQRGGTFQ 292
Query: 183 NYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLRDLHRAIKQCERYLVS 362
NYYMY GGTNFGRT GGP +ATSYDYDAPIDEYG +RQPKWGHL++LH+AIK CE LV+
Sbjct: 293 NYYMYHGGTNFGRTTGGPFIATSYDYDAPIDEYGIVRQPKWGHLKELHKAIKLCEAALVN 352
Query: 363 SDPIFKKLGVNLEAHIYYKSPNNCAAFLSNVDKLLDANVTFNGRTYNLPAWSVSIL 530
++ + LG LEAH+Y CAAFL+N + DA V FNG +Y+LPAWSVSIL
Sbjct: 353 AESNYTSLGSGLEAHVYSPGSGTCAAFLANSNTQSDATVKFNGNSYHLPAWSVSIL 408
Score = 94.4 bits (233), Expect(2) = 1e-93
Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 12/116 (10%)
Frame = +1
Query: 583 AWSVSILPDCKNVVYNTAKIVSQRSLGHH------LTTTRSLKD-ELPKASTWSWYKEKK 741
AWSVSILPDCKNVV+NTAKI SQ + L + S+K + A++WSW E+
Sbjct: 402 AWSVSILPDCKNVVFNTAKIGSQTTSVQMNPANLILAGSNSMKGTDSANAASWSWLHEQI 461
Query: 742 GVQDKYSFTSPSLLEQIKTTKDTSDFLWYTTSVIVKPGE-----RKEVFLSVESLG 894
G+ +F+ P LLEQI TT D+SD+LWYTTS+ V E + L V+SLG
Sbjct: 462 GIGGSNTFSKPGLLEQINTTVDSSDYLWYTTSIQVDDNEPFLHNGTQPVLHVQSLG 517
>ref|XP_003558321.1| PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 6-like
[Brachypodium distachyon]
Length = 852
Score = 277 bits (708), Expect(2) = 1e-93
Identities = 122/176 (69%), Positives = 147/176 (83%)
Frame = +3
Query: 3 NTCNGFYCDEFTPNSPSKPKMWTENYVGWFLAFGYAHPFRPDEDLAFAVTRFFGKGGTFQ 182
NTCNGFYCD+FTPNS SKPK+WTEN+ GWFL+FG A P+RP EDLAFAV RF+ +GGT Q
Sbjct: 231 NTCNGFYCDQFTPNSNSKPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQ 290
Query: 183 NYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLRDLHRAIKQCERYLVS 362
NYYMY GGTNFGR++GGP ++TSYDYDAPIDEYG +RQPKWGHL+D+H+AIKQCE L++
Sbjct: 291 NYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLKDVHKAIKQCEPALIA 350
Query: 363 SDPIFKKLGVNLEAHIYYKSPNNCAAFLSNVDKLLDANVTFNGRTYNLPAWSVSIL 530
+DP + +G N EAH+ YK+ + CAAFL+N+D D VTFNG Y LPAWSVSIL
Sbjct: 351 TDPSYMSMGQNAEAHV-YKAGSVCAAFLANMDTQSDKTVTFNGNAYKLPAWSVSIL 405
Score = 93.2 bits (230), Expect(2) = 1e-93
Identities = 54/100 (54%), Positives = 65/100 (65%), Gaps = 8/100 (8%)
Frame = +1
Query: 583 AWSVSILPDCKNVVYNTAKIVSQ------RSLGHHLTTT--RSLKDELPKASTWSWYKEK 738
AWSVSILPDCKNVV NTA+I SQ RSLG + S++ EL S WS+ E
Sbjct: 399 AWSVSILPDCKNVVLNTAQINSQTTTSEMRSLGSSTKASDGSSIETELA-LSGWSYAIEP 457
Query: 739 KGVQDKYSFTSPSLLEQIKTTKDTSDFLWYTTSVIVKPGE 858
G+ + + T P L+EQI TT D SDFLWY+TSV+VK GE
Sbjct: 458 VGITTENALTKPGLMEQINTTADASDFLWYSTSVVVKGGE 497
>dbj|BAJ89450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 278 bits (710), Expect(2) = 1e-93
Identities = 122/176 (69%), Positives = 147/176 (83%)
Frame = +3
Query: 3 NTCNGFYCDEFTPNSPSKPKMWTENYVGWFLAFGYAHPFRPDEDLAFAVTRFFGKGGTFQ 182
NTCNGFYCD+FTP+ PS+PK+WTEN+ GWFL+FG A P+RP EDLAFAV RF+ +GGT Q
Sbjct: 142 NTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQ 201
Query: 183 NYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLRDLHRAIKQCERYLVS 362
NYYMY GGTNFGR++GGP ++TSYDYDAPIDEYG +RQPKWGHLRD+H+AIK CE L++
Sbjct: 202 NYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIA 261
Query: 363 SDPIFKKLGVNLEAHIYYKSPNNCAAFLSNVDKLLDANVTFNGRTYNLPAWSVSIL 530
+DP + LG N EAH+ YKS + CAAFL+N+D D VTFNG+ Y LPAWSVSIL
Sbjct: 262 TDPSYMSLGQNAEAHV-YKSGSLCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSIL 316
Score = 92.4 bits (228), Expect(2) = 1e-93
Identities = 57/116 (49%), Positives = 72/116 (62%), Gaps = 12/116 (10%)
Frame = +1
Query: 583 AWSVSILPDCKNVVYNTAKIVSQ------RSLGHHLTTT--RSLKDELPKASTWSWYKEK 738
AWSVSILPDCKNVV NTA+I SQ R+LG + S++ EL AS+WS+ E
Sbjct: 310 AWSVSILPDCKNVVLNTAQINSQVASTQMRNLGFSTQASDGSSVEAELA-ASSWSYAVEP 368
Query: 739 KGVQDKYSFTSPSLLEQIKTTKDTSDFLWYTTSVIVKPGE----RKEVFLSVESLG 894
G+ + + T P L+EQI TT D SDFLWY+TS++V GE + L V SLG
Sbjct: 369 VGITKENALTKPGLMEQINTTADASDFLWYSTSIVVAGGEPYLNGSQSNLPVNSLG 424