BLASTX nr result
ID: Coptis25_contig00020968
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020968 (544 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 69 6e-10 gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana] 60 2e-07 emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera] 60 3e-07 ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S... 59 4e-07 ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S... 59 5e-07 >emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1369 Score = 68.6 bits (166), Expect = 6e-10 Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 4/90 (4%) Frame = -1 Query: 262 MMTMNCRGMGTDSTILITKDLVREHQPDILCFSETKADKRRMEVVRKELKYQGNFILPAE 83 +++ NCRGMG+ S + + L+ P I+ SETK ME V+K+LK++ + E Sbjct: 4 ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63 Query: 82 G----TRGGLAVLWKEGIQLEVLGATQNHI 5 G RGGLA+LW+ I+++V+ + NHI Sbjct: 64 GECRKRRGGLAMLWRSEIKVQVMSMSSNHI 93 >gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana] Length = 238 Score = 60.1 bits (144), Expect = 2e-07 Identities = 27/74 (36%), Positives = 43/74 (58%) Frame = -1 Query: 250 NCRGMGTDSTILITKDLVREHQPDILCFSETKADKRRMEVVRKELKYQGNFILPAEGTRG 71 NC+G+G D T+ K++ R++ PD++C SETK + EL + ++P+ G G Sbjct: 60 NCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLSG 119 Query: 70 GLAVLWKEGIQLEV 29 GL VLWK + + V Sbjct: 120 GLVVLWKPSVHISV 133 >emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera] Length = 652 Score = 59.7 bits (143), Expect = 3e-07 Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Frame = -1 Query: 271 TAMM-MTMNCRGMGTDSTILITKDLVREHQPDILCFSETKADKRRMEVVRKELKYQGNFI 95 TAM+ ++ NCRG+G T+L ++ + +PD + ET ++E ++ +L ++G F Sbjct: 305 TAMIGISWNCRGLGNPRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKLGFEGAFC 364 Query: 94 LPAEGTRGGLAVLWKEGIQLEVLGATQNHI 5 + G GGLA LW++ +L +Q+HI Sbjct: 365 VDRVGRGGGLAFLWRKAGMFSLLXYSQSHI 394 >ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor] gi|241936261|gb|EES09406.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor] Length = 753 Score = 59.3 bits (142), Expect = 4e-07 Identities = 25/82 (30%), Positives = 45/82 (54%) Frame = -1 Query: 250 NCRGMGTDSTILITKDLVREHQPDILCFSETKADKRRMEVVRKELKYQGNFILPAEGTRG 71 NCRG+G +T+ +DL +++ P ++ ET+ K R+E +R L + +F + + G G Sbjct: 7 NCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVNSSGRSG 66 Query: 70 GLAVLWKEGIQLEVLGATQNHI 5 GL + W + L + + HI Sbjct: 67 GLGLFWNNDVLLSIQKYSNYHI 88 >ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor] gi|241941722|gb|EES14867.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor] Length = 589 Score = 58.9 bits (141), Expect = 5e-07 Identities = 27/77 (35%), Positives = 46/77 (59%) Frame = -1 Query: 235 GTDSTILITKDLVREHQPDILCFSETKADKRRMEVVRKELKYQGNFILPAEGTRGGLAVL 56 G D + + R PD++ SETK+D++RM V+R +L ++ ++ G GGLAVL Sbjct: 258 GRDDIVRGLLNCQRSVSPDMMLLSETKSDEKRMRVLRMKLGFENMEVVDCVGKGGGLAVL 317 Query: 55 WKEGIQLEVLGATQNHI 5 W+ G+ + + ++NHI Sbjct: 318 WRRGVDVVLRSKSKNHI 334