BLASTX nr result
ID: Coptis25_contig00020954
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020954 (1827 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303222.1| predicted protein [Populus trichocarpa] gi|2... 616 e-174 ref|XP_002519926.1| pentatricopeptide repeat-containing protein,... 598 e-168 ref|XP_003548696.1| PREDICTED: pentatricopeptide repeat-containi... 576 e-162 ref|XP_003629008.1| Pentatricopeptide repeat-containing protein ... 550 e-154 ref|XP_002269803.2| PREDICTED: pentatricopeptide repeat-containi... 535 e-149 >ref|XP_002303222.1| predicted protein [Populus trichocarpa] gi|222840654|gb|EEE78201.1| predicted protein [Populus trichocarpa] Length = 472 Score = 616 bits (1588), Expect = e-174 Identities = 295/446 (66%), Positives = 362/446 (81%) Frame = +1 Query: 361 MNPRVRVLCDIVGTVPAAEIETALARCGVSPLPEYAEEVLKHSYEFPAAAVKFFKWTGSL 540 ++P R+L +I+ + +IE+AL+ G+ P + EVLK +E +A+ FF+W G Sbjct: 26 ISPSARLLFEIITRPSSHDIESALSSTGIPPTHDIVHEVLKLCHENATSAIAFFRWAGRT 85 Query: 541 NRHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQENVLSMATFASVFGSYCIAGKFSEAVM 720 ++ T Y+WNLMVDLLGKN ++E MWDA+R+MKQE++LSMATF SVFGSYC+AGKF+EA+M Sbjct: 86 HKLTSYAWNLMVDLLGKNWMYEPMWDAVRTMKQEDMLSMATFVSVFGSYCMAGKFNEAIM 145 Query: 721 SFDVLDRYGIQQDVIAVNSLLSAICREENQTYKALEFFEKIKMKIAPDADTFAILLEGWE 900 SF V+D+YG+QQDV+ VNSLL+AIC EENQT KALEFF+KIK+KI P+ADTFAILLEGWE Sbjct: 146 SFYVMDKYGVQQDVVVVNSLLTAICHEENQTAKALEFFDKIKLKIPPNADTFAILLEGWE 205 Query: 901 KEGNAAKAKNTFGEMVIRVGWSPQNMSAYDAFLTTLVRGAQADEAIKFLHVMKGKNCLPG 1080 KEG+ AKAK TFGEMVI+VGWSP+NMSAYD+FLTTLVRG+QADEA+KFL VMKGKNCLPG Sbjct: 206 KEGDVAKAKTTFGEMVIKVGWSPENMSAYDSFLTTLVRGSQADEAVKFLRVMKGKNCLPG 265 Query: 1081 MKFFSNALDILVKQNDSSQAVPLWEIMVGSGLLPSLIMYNAMIGLLCNNSDFDNALRLLD 1260 +KFFSNALD+LVKQNDS+ A+PLW+IMVGSGLLP+LIMYNAMIGL CNN+D DNA RLLD Sbjct: 266 LKFFSNALDMLVKQNDSTHAIPLWDIMVGSGLLPNLIMYNAMIGLHCNNNDVDNAFRLLD 325 Query: 1261 EMAFRGAFPDSLTYNMIFQCLIKNKKVRQAANFFNEMMKNEQPPTHANCXXXXXXXXXXX 1440 EM F GAFPD LT+N+IF+CLIKNKKV + FF EM+KNE PPTH +C Sbjct: 326 EMVFNGAFPDFLTFNIIFRCLIKNKKVHRVGKFFYEMIKNESPPTHFDCSAAIMTLIDGG 385 Query: 1441 XPETAVEVWVSMMINLVYPADDSSNELLIGLCGLGRLSEVRKFFDDMLDRRINIYESTMK 1620 PE A+E+W ++ N V P D S+N LLIG C LGR+S+VR+F +DMLDRRINIYESTMK Sbjct: 386 DPEMAIEIWNYIVENHVLPLDGSANALLIGFCNLGRMSQVRRFAEDMLDRRINIYESTMK 445 Query: 1621 KLKNAFYKKGRSGEDIYYHLSKKWKA 1698 KLK++F K GR G D Y L ++WKA Sbjct: 446 KLKDSFDKTGRHGRDKYDCLIRRWKA 471 >ref|XP_002519926.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223540972|gb|EEF42530.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 481 Score = 598 bits (1543), Expect = e-168 Identities = 291/456 (63%), Positives = 357/456 (78%) Frame = +1 Query: 331 HPSYIEATPTMNPRVRVLCDIVGTVPAAEIETALARCGVSPLPEYAEEVLKHSYEFPAAA 510 H + ++ ++ R L DI+ V ++E+AL+ G++ + EVLK SY PA+A Sbjct: 25 HSNGVDIDIDISQSARTLSDILTRVSPHDMESALSSTGINLTCDIIHEVLKLSYSNPASA 84 Query: 511 VKFFKWTGSLNRHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQENVLSMATFASVFGSYC 690 V+FF+W G HT YSWNLMVDLLGKN LFE MWDAIRSMKQENVLSMATFASVFGSYC Sbjct: 85 VEFFRWAGRSGTHTPYSWNLMVDLLGKNQLFEAMWDAIRSMKQENVLSMATFASVFGSYC 144 Query: 691 IAGKFSEAVMSFDVLDRYGIQQDVIAVNSLLSAICREENQTYKALEFFEKIKMKIAPDAD 870 AG FSEA+MSFD++D+YGIQQDVIAVNSLLSAIC E+NQT KA+EFF++IK+KI PD D Sbjct: 145 KAGSFSEAIMSFDIMDKYGIQQDVIAVNSLLSAICNEDNQTIKAVEFFDRIKLKIPPDGD 204 Query: 871 TFAILLEGWEKEGNAAKAKNTFGEMVIRVGWSPQNMSAYDAFLTTLVRGAQADEAIKFLH 1050 T+AILLEGWEKEGNAAKAKN FGEMVI VGWSP+NM AY+AFL LVR +Q D+A FL Sbjct: 205 TYAILLEGWEKEGNAAKAKNIFGEMVIHVGWSPENMPAYNAFLNLLVRESQTDDAFDFLR 264 Query: 1051 VMKGKNCLPGMKFFSNALDILVKQNDSSQAVPLWEIMVGSGLLPSLIMYNAMIGLLCNNS 1230 +MK K CLPG+KF+S+ALD+L+K+ND AVP+W+IMV +GL+P+L+MYN+MIGLLCNN+ Sbjct: 265 LMKEKGCLPGLKFYSDALDMLLKRNDVLHAVPMWDIMVDTGLMPNLLMYNSMIGLLCNNN 324 Query: 1231 DFDNALRLLDEMAFRGAFPDSLTYNMIFQCLIKNKKVRQAANFFNEMMKNEQPPTHANCX 1410 D DNA RL D+M F GAFPD LTY MIF+CL+KNKKV QAA+FF+EM+KNE PPTH +C Sbjct: 325 DIDNAFRLFDDMVFHGAFPDFLTYKMIFRCLVKNKKVSQAASFFHEMIKNENPPTHLDCA 384 Query: 1411 XXXXXXXXXXXPETAVEVWVSMMINLVYPADDSSNELLIGLCGLGRLSEVRKFFDDMLDR 1590 PE A+E+W M+ + P D+S+N LL+GL LGRLSEV +F +DMLDR Sbjct: 385 AAITMFMGGDDPEMAIEIWNYMVDDQELPLDESANALLVGLGNLGRLSEVSRFAEDMLDR 444 Query: 1591 RINIYESTMKKLKNAFYKKGRSGEDIYYHLSKKWKA 1698 RINI+ESTM KLK +FYK+GRS D + LS+KWKA Sbjct: 445 RINIHESTMAKLKASFYKEGRSSRDRFDSLSRKWKA 480 >ref|XP_003548696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Glycine max] Length = 488 Score = 576 bits (1485), Expect = e-162 Identities = 277/459 (60%), Positives = 347/459 (75%) Frame = +1 Query: 322 PQNHPSYIEATPTMNPRVRVLCDIVGTVPAAEIETALARCGVSPLPEYAEEVLKHSYEFP 501 P PS+++A P ++ R LCDI+ +IE+AL+ G+ P E EVL+ SY +P Sbjct: 27 PNQFPSHLDA-PNVSSTARALCDILTRSSPQDIESALSSSGIVPEEECTNEVLRLSYNYP 85 Query: 502 AAAVKFFKWTGSLNRHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQENVLSMATFASVFG 681 ++AVKFF+W G +H ++WNLMVDLLGKN LFE MWDA+RSMKQE LS++TFASVF Sbjct: 86 SSAVKFFRWAGRGKKHPVHTWNLMVDLLGKNQLFEPMWDAVRSMKQEQKLSLSTFASVFQ 145 Query: 682 SYCIAGKFSEAVMSFDVLDRYGIQQDVIAVNSLLSAICREENQTYKALEFFEKIKMKIAP 861 SYC A +F+EAVMSFDV+DRYG++QDV+AVNSLLSAIC E+NQT LEFFE IK K+ P Sbjct: 146 SYCTAARFNEAVMSFDVMDRYGVKQDVVAVNSLLSAICSEDNQTSFGLEFFEGIKAKVPP 205 Query: 862 DADTFAILLEGWEKEGNAAKAKNTFGEMVIRVGWSPQNMSAYDAFLTTLVRGAQADEAIK 1041 D DTFAILLEGWEKEGNAAKAK TFG+MV +GW+ N++AYDAFL TL+R D+ ++ Sbjct: 206 DGDTFAILLEGWEKEGNAAKAKTTFGDMVAHIGWNKDNVAAYDAFLMTLLRAGLMDDVVR 265 Query: 1042 FLHVMKGKNCLPGMKFFSNALDILVKQNDSSQAVPLWEIMVGSGLLPSLIMYNAMIGLLC 1221 FL VMK +C PG+KFF+ ALD LVKQND+ AVP+W++MV L+P+LIMYNAMIGLLC Sbjct: 266 FLQVMKDHDCFPGLKFFTTALDFLVKQNDADHAVPVWDVMVSGELVPNLIMYNAMIGLLC 325 Query: 1222 NNSDFDNALRLLDEMAFRGAFPDSLTYNMIFQCLIKNKKVRQAANFFNEMMKNEQPPTHA 1401 NN+ D+A RLLDEMAF GAFPDSLTYNMIF+CL+KNKK R+ FF EM+KNE PPT + Sbjct: 326 NNAAVDHAFRLLDEMAFHGAFPDSLTYNMIFECLVKNKKARETERFFAEMVKNEWPPTGS 385 Query: 1402 NCXXXXXXXXXXXXPETAVEVWVSMMINLVYPADDSSNELLIGLCGLGRLSEVRKFFDDM 1581 NC PE A E+W ++ N V P D+S+N LLIGLC + R +EV++F +D+ Sbjct: 386 NCAAAIAMLFDCDDPEAAHEIWSYVVENRVKPLDESANALLIGLCNMSRFTEVKRFAEDI 445 Query: 1582 LDRRINIYESTMKKLKNAFYKKGRSGEDIYYHLSKKWKA 1698 LDRRINIY+STM LK+AFYK+GRS D Y L ++WKA Sbjct: 446 LDRRINIYQSTMSILKDAFYKEGRSARDRYDSLYRRWKA 484 >ref|XP_003629008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355523030|gb|AET03484.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 543 Score = 550 bits (1417), Expect = e-154 Identities = 271/466 (58%), Positives = 347/466 (74%), Gaps = 7/466 (1%) Frame = +1 Query: 322 PQNHPSYIEATPTMNPRVRVLCDIVGTVPAAEIETALARCGVSPLPEYAEEVLKHSYEFP 501 P PS+++ TP ++ R LC+++ +I+ AL+ G+ P E EVLK SY +P Sbjct: 38 PNEFPSHLD-TPNVSSTARTLCNLLTRTSPQDIDNALSSSGIHPSEECVHEVLKLSYNYP 96 Query: 502 AAAVKFFKWTGSLNRHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQENVLSMATFASVFG 681 ++A+KFF+W G L +H+ ++WNLMVDLLG+N LFE MWDA+R+MKQE VLS+ TF SVF Sbjct: 97 SSAIKFFRWAGRLRKHSAHAWNLMVDLLGRNQLFEPMWDAVRTMKQEGVLSLPTFVSVFQ 156 Query: 682 SYCIAGKFSEAVMSFDVLDRYGIQQDVIAVNSLLSAICREENQTYKALEFFEKI-----K 846 SYC+AG+ +EAVMSFDV+D+Y I ++V+AVNSLLSAICREENQT +EF EK + Sbjct: 157 SYCMAGRVNEAVMSFDVMDKYDIDKNVVAVNSLLSAICREENQTSVGVEFLEKKVTGKDE 216 Query: 847 MKIAPDADTFAILLEGWEKEGNAAKAKNTFGEMVIRVGWSPQNMSAYDAFLTTLVRGAQA 1026 KI D D++AILLEGWEKEGNA KAK TFGEMVIRVGWS N++AYDAFL TL+R Q Sbjct: 217 GKIELDGDSYAILLEGWEKEGNATKAKTTFGEMVIRVGWSQDNVAAYDAFLMTLLRALQF 276 Query: 1027 DEAIKFLHVMKGKNCLPGMKFFSNALDILVKQNDSSQAVPLWEIMVGSGLLPSLIMYNAM 1206 DE + FL VMK +C PG+KFF+NALD+LVK+ND++ A+PLW++MV SGLLP+LIMYNAM Sbjct: 277 DEVVGFLKVMKDHDCFPGLKFFTNALDVLVKRNDAAHAIPLWDVMVVSGLLPNLIMYNAM 336 Query: 1207 IGLLCNNSDFDNALRLLDEMAFRGAFPDSLTYNMIFQCLIKNKKVRQAANFFNEMMKNEQ 1386 IGLLCNN + D+A RLLDEM GAFPDSLTYNMIF+CL+KNKKVR+ FF EM+KNE Sbjct: 337 IGLLCNNDEIDHAFRLLDEMVLHGAFPDSLTYNMIFECLVKNKKVRETERFFAEMIKNEW 396 Query: 1387 PPTHANCXXXXXXXXXXXXPETAVEVWVSMMINLVYPADDSSNELLIGLCGLGRLSEVRK 1566 PT +NC P+ A+E+W M+ V D S+N +LIGLC L RLSEVR+ Sbjct: 397 LPTTSNCAVAIEMLFNCDDPDAALEIWSYMVETRVRVLDVSANMVLIGLCKLKRLSEVRR 456 Query: 1567 FFDDMLDRRINIYESTMKKLKNAFYKKGR--SGEDIYYHLSKKWKA 1698 F ++MLD+RI+IY+STM KLK AFYK+ R S D + + ++WKA Sbjct: 457 FAEEMLDKRISIYDSTMNKLKEAFYKESRSSSARDKFDAIYRRWKA 502 >ref|XP_002269803.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Vitis vinifera] gi|296085476|emb|CBI29208.3| unnamed protein product [Vitis vinifera] Length = 464 Score = 535 bits (1378), Expect = e-149 Identities = 257/445 (57%), Positives = 324/445 (72%) Frame = +1 Query: 361 MNPRVRVLCDIVGTVPAAEIETALARCGVSPLPEYAEEVLKHSYEFPAAAVKFFKWTGSL 540 ++P + L I+ + AL+ + P P+ ++VL+ SY +AAV+FF+W G Sbjct: 13 ISPDAKTLLQIISATAPHALVAALSATSIPPTPDVVQDVLRLSYSNSSAAVEFFRWAGLT 72 Query: 541 NRHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQENVLSMATFASVFGSYCIAGKFSEAVM 720 +H+ +SWNL+VDLLGKN FE MWDAIRSM+ E LS++ F SVFGSYC G+ +EA+M Sbjct: 73 RKHSAHSWNLIVDLLGKNSKFEPMWDAIRSMRNEGALSLSAFISVFGSYCSVGRVNEAIM 132 Query: 721 SFDVLDRYGIQQDVIAVNSLLSAICREENQTYKALEFFEKIKMKIAPDADTFAILLEGWE 900 SF+V+DRYGI DV A+N+LLSAIC E T ALEFFEKIK+KI PD DTF ILLEGWE Sbjct: 133 SFEVMDRYGIPPDVAAMNALLSAICCEGGSTTLALEFFEKIKVKITPDGDTFMILLEGWE 192 Query: 901 KEGNAAKAKNTFGEMVIRVGWSPQNMSAYDAFLTTLVRGAQADEAIKFLHVMKGKNCLPG 1080 +EGN KAK+TFGEMV+R+GWSPQNM AY++ L TLVRG + +EAIKFL VMKGK CLPG Sbjct: 193 REGNVTKAKSTFGEMVVRLGWSPQNMVAYNSVLMTLVRGMEVEEAIKFLLVMKGKGCLPG 252 Query: 1081 MKFFSNALDILVKQNDSSQAVPLWEIMVGSGLLPSLIMYNAMIGLLCNNSDFDNALRLLD 1260 +KFFSNALD+L+KQNDS+ A+ LW+IM+ G +P+L+MYN +IG+LCN D DNA R LD Sbjct: 253 LKFFSNALDVLLKQNDSTHAIALWDIMLDGGFMPNLMMYNTIIGILCNAGDADNAFRFLD 312 Query: 1261 EMAFRGAFPDSLTYNMIFQCLIKNKKVRQAANFFNEMMKNEQPPTHANCXXXXXXXXXXX 1440 EM F G F DS TYNMIFQCL+K+KKV +A FF EM+KNE PP +NC Sbjct: 313 EMVFYGVFADSFTYNMIFQCLVKHKKVHEAGKFFIEMIKNECPPMPSNCAAAIAMCFDGD 372 Query: 1441 XPETAVEVWVSMMINLVYPADDSSNELLIGLCGLGRLSEVRKFFDDMLDRRINIYESTMK 1620 PE A+E+W M+ N + P D+S+N LLIGLC L R S+ R+F +DMLD +I I+ESTM+ Sbjct: 373 DPEMAIEIWSYMIENSLSPVDESANALLIGLCNLRRFSDYRRFAEDMLDMKIKIHESTME 432 Query: 1621 KLKNAFYKKGRSGEDIYYHLSKKWK 1695 KLKNA YK GRS D L K+WK Sbjct: 433 KLKNARYKDGRSARDTCDSLWKRWK 457