BLASTX nr result
ID: Coptis25_contig00020943
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00020943
(255 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28421.3| unnamed protein product [Vitis vinifera] 130 1e-28
emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera] 130 1e-28
ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containi... 86 3e-15
dbj|BAD30981.1| putative fertility restorer homologue [Oryza sat... 85 5e-15
gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indi... 85 5e-15
>emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 130 bits (327), Expect = 1e-28
Identities = 59/84 (70%), Positives = 74/84 (88%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
NL+ YSSL+YGLCQEGKA++AE L++E+E K + D+V +TSLIDGF +LGR+DHAF LL
Sbjct: 617 NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLL 676
Query: 183 KRMIDFGCKPNYRTYTVLLKGLQK 254
+RM+D GCKPNYRTY+VLLKGLQK
Sbjct: 677 RRMVDMGCKPNYRTYSVLLKGLQK 700
Score = 64.7 bits (156), Expect = 8e-09
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = +3
Query: 15 YSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLLKRMI 194
Y+ LV G + GK E A +E+ + + V+YT+LIDG + G++D A SLLKRM
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540
Query: 195 DFGCKPNYRTYTVLLKGLQK 254
+ GC PN +Y ++ GL K
Sbjct: 541 EMGCNPNVESYNAVINGLSK 560
Score = 59.3 bits (142), Expect = 3e-07
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
N YS+L+ GLC EG+ ++A ++EE+ K + YT I + + A L+
Sbjct: 267 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 326
Query: 183 KRMIDFGCKPNYRTYTVLLKGLQK 254
RM GC+PN +TYT L+ GL +
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSR 350
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/82 (32%), Positives = 48/82 (58%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
N+ Y++++ GL +E + +AEK+ +++ + ++ + + YT+LIDG GR AF +
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606
Query: 183 KRMIDFGCKPNYRTYTVLLKGL 248
M C PN TY+ L+ GL
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGL 628
>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 130 bits (326), Expect = 1e-28
Identities = 59/84 (70%), Positives = 74/84 (88%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
NL+ YSSL+YGLCQEGKA++AE L++E+E K + D+V +TSLIDGF +LGR+DHAF LL
Sbjct: 659 NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLL 718
Query: 183 KRMIDFGCKPNYRTYTVLLKGLQK 254
+RM+D GCKPNYRTY+VLLKGLQK
Sbjct: 719 RRMVDVGCKPNYRTYSVLLKGLQK 742
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/80 (40%), Positives = 48/80 (60%)
Frame = +3
Query: 15 YSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLLKRMI 194
Y+ LV G + GK E A +E+ + + V+YT+LIDG + G++D A SLL+RM
Sbjct: 523 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME 582
Query: 195 DFGCKPNYRTYTVLLKGLQK 254
+ GC PN +Y ++ GL K
Sbjct: 583 EMGCNPNVESYNAVINGLSK 602
Score = 59.3 bits (142), Expect = 3e-07
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
N YS+L+ GLC EG+ ++A ++EE+ K + YT I + + A L+
Sbjct: 309 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 368
Query: 183 KRMIDFGCKPNYRTYTVLLKGLQK 254
RM GC+PN +TYT L+ GL +
Sbjct: 369 ARMKKRGCRPNVQTYTALISGLSR 392
Score = 57.0 bits (136), Expect = 2e-06
Identities = 27/82 (32%), Positives = 48/82 (58%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
N+ Y++++ GL +E + +AEK+ +++ + ++ + + YT+LIDG GR AF +
Sbjct: 589 NVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 648
Query: 183 KRMIDFGCKPNYRTYTVLLKGL 248
M C PN TY+ L+ GL
Sbjct: 649 HDMEKRKCLPNLYTYSSLIYGL 670
Score = 55.1 bits (131), Expect = 6e-06
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
+L +Y +L+ LC+ G+ E+A+ L + + K D++ +T L+DG G LD LL
Sbjct: 858 HLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL 917
Query: 183 KRMIDFGCKPNYRTYTVLLKGLQK 254
M PN +TY +L + L +
Sbjct: 918 HIMESKNFTPNIQTYVILGRELSR 941
>ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 85.9 bits (211), Expect = 3e-15
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
NLH YSSL+ L QEG+ E+AE++ EL+ + +I D+V Y +I+ M G++D AF L
Sbjct: 644 NLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFL 703
Query: 183 KRMIDFGCKPNYRTYTVLLKGLQ 251
MI+ GC+P +TY VL+KGLQ
Sbjct: 704 GEMINAGCQPTLQTYDVLIKGLQ 726
Score = 68.2 bits (165), Expect = 7e-10
Identities = 33/82 (40%), Positives = 49/82 (59%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
NL +Y+S++ LC++G DAE +I ++ M D YTS+I G+ LD AF +
Sbjct: 227 NLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIF 286
Query: 183 KRMIDFGCKPNYRTYTVLLKGL 248
RM + GC+PN TY+ L+ GL
Sbjct: 287 NRMDEEGCEPNAATYSTLINGL 308
Score = 62.8 bits (151), Expect = 3e-08
Identities = 31/80 (38%), Positives = 48/80 (60%)
Frame = +3
Query: 15 YSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLLKRMI 194
Y+ L+ G C+ K E A + E+ + + ++V YT+LI G+ +LD A +L+RM
Sbjct: 508 YTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMK 567
Query: 195 DFGCKPNYRTYTVLLKGLQK 254
GC+PN +TY VL+ GL K
Sbjct: 568 RSGCRPNVQTYNVLIHGLTK 587
>dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer
homologue [Oryza sativa Japonica Group]
Length = 918
Score = 85.1 bits (209), Expect = 5e-15
Identities = 41/83 (49%), Positives = 56/83 (67%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
NL YSSL+ L QEGK E+AE L ELE +I D++ Y +I+ + M G+++HAF+ L
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 693
Query: 183 KRMIDFGCKPNYRTYTVLLKGLQ 251
RMI GC+P TY VL+KGL+
Sbjct: 694 GRMIKAGCQPTLWTYGVLIKGLK 716
Score = 66.2 bits (160), Expect = 3e-09
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = +3
Query: 15 YSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLLKRMI 194
Y+ L+ G C+ K E A L E+ + ++V YT+LIDG+ +LD A SLL+ M
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557
Query: 195 DFGCKPNYRTYTVLLKGLQK 254
GC+PN +TY VL+ GL K
Sbjct: 558 RSGCRPNVQTYNVLIHGLTK 577
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
NL +Y++++ LC++G DAE +++++ M D YTS+I G LD A +
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 183 KRMIDFGCKPNYRTYTVLLKGL 248
+M GC+PN TY+ L+ GL
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGL 295
Score = 57.8 bits (138), Expect = 9e-07
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
NL Y++++ G C G A ++++ + D+ +YT LI GF + +++ AF L
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518
Query: 183 KRMIDFGCKPNYRTYTVLLKGLQK 254
M+D G PN TYT L+ G K
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCK 542
>gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer
homologue [Oryza sativa Indica Group]
Length = 918
Score = 85.1 bits (209), Expect = 5e-15
Identities = 41/83 (49%), Positives = 56/83 (67%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
NL YSSL+ L QEGK E+AE L ELE +I D++ Y +I+ + M G+++HAF+ L
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 693
Query: 183 KRMIDFGCKPNYRTYTVLLKGLQ 251
RMI GC+P TY VL+KGL+
Sbjct: 694 GRMIKAGCQPTLWTYGVLIKGLK 716
Score = 66.2 bits (160), Expect = 3e-09
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = +3
Query: 15 YSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLLKRMI 194
Y+ L+ G C+ K E A L E+ + ++V YT+LIDG+ +LD A SLL+ M
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557
Query: 195 DFGCKPNYRTYTVLLKGLQK 254
GC+PN +TY VL+ GL K
Sbjct: 558 RSGCRPNVQTYNVLIHGLTK 577
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
NL +Y++++ LC++G DAE +++++ M D YTS+I G LD A +
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 183 KRMIDFGCKPNYRTYTVLLKGL 248
+M GC+PN TY+ L+ GL
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGL 295
Score = 57.8 bits (138), Expect = 9e-07
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NLHVYSSLVYGLCQEGKAEDAEKLIEELEGKRMILDQVAYTSLIDGFTMLGRLDHAFSLL 182
NL Y++++ G C G A ++++ + D+ +YT LI GF + +++ AF L
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518
Query: 183 KRMIDFGCKPNYRTYTVLLKGLQK 254
M+D G PN TYT L+ G K
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCK 542