BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020934
         (1993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vi...   572   e-160
ref|XP_002510970.1| ubiquitin-protein ligase, putative [Ricinus ...   538   e-150
emb|CBI38670.3| unnamed protein product [Vitis vinifera]              529   e-147
ref|XP_002263969.1| PREDICTED: F-box protein At5g07670 [Vitis vi...   529   e-147
ref|XP_003540579.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   525   e-146

>ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 473

 Score =  572 bits (1475), Expect = e-160
 Identities = 292/442 (66%), Positives = 343/442 (77%), Gaps = 7/442 (1%)
 Frame = +2

Query: 8    WLKEKA-LKHVVFKMQLD----KNRHQQKEEEMSKPSDFSLLSDTLALQILIKLPQQN-- 166
            W  ++A   HVVFKMQL     +N    ++        FSLLSD L L IL KLP  +  
Sbjct: 20   WFNDQAPFSHVVFKMQLQSLSPENDIVPRKSLTITTDPFSLLSDQLLLHILSKLPYSHHT 79

Query: 167  PNSLVCKKWMCLLGQLVTSIKLLDWNFLESGRLVSRFPNLTHIDLASACIDSTKNSPILL 346
              SLVCK+WM L G+LV S+KL+DW+FLESGRL+ RFPNLT IDL  AC+    NS I L
Sbjct: 80   TTSLVCKRWMHLHGRLVQSVKLVDWDFLESGRLICRFPNLTDIDLVRACVRLPNNSAIWL 139

Query: 347  THRLISIHLDSEFIVGNKFVCDDNLLSLEKIDRGLRVLARGCPSLRKLVLISASEDGLSC 526
            +H+ +SI LDS F+ G  FV  D+LL  + ID GLR++A GCP+LRKLVLI ASE GLS 
Sbjct: 140  SHKFLSIQLDSRFLSGG-FVSGDDLLPPDVIDEGLRIVAEGCPNLRKLVLIGASEKGLSS 198

Query: 527  VAEECPTLQELELHDCTDFALKGIVECKNLQILKLVGCVDGFYGSVISDIGLTILANGCK 706
            VA EC TLQELELH CTD +L+GI  C+NLQILKL+G V   Y SVISDIGLTILA GC+
Sbjct: 199  VATECLTLQELELHYCTDLSLRGISGCQNLQILKLIGSVRELYNSVISDIGLTILAQGCR 258

Query: 707  RLVKIELSGCEGSYDGIRAIGQCCDMLEEITFFDHRMDAGWIAALSFCGNLKTLRLISCK 886
            RLVK+EL GCEGSYDGI+AIGQCC MLEE+T  DHRMD GW++ALSFCGNLKTL+L SCK
Sbjct: 259  RLVKLELCGCEGSYDGIKAIGQCCQMLEELTLCDHRMDGGWLSALSFCGNLKTLKLQSCK 318

Query: 887  KVDPSPGPIEHLGSCPTLETLHLQRCQIRDKESANALFLVCIAVRDVVIQDCWGMHNEMF 1066
             +D SPG  +HLGSCPTLETLHLQRCQ+RDK+S  ALFLVC AVR++V+QDCWG+ +E F
Sbjct: 319  SIDASPGSDQHLGSCPTLETLHLQRCQMRDKQSTRALFLVCEAVREIVLQDCWGLEDETF 378

Query: 1067 AFASICRRVKFLSLEGCSLLTTDCLESVVLSWVELQQLKVVSCNNIKDSEVTPAMSTLFS 1246
              A+ICRR+K LSLEGCSLLT + L+SVV SW ELQ+L+VVSCNNIKDSEVTPA++TLFS
Sbjct: 379  GIATICRRLKSLSLEGCSLLTVEGLDSVVHSWKELQRLRVVSCNNIKDSEVTPALATLFS 438

Query: 1247 ALKELKWRPDTRSLLSSDLAGT 1312
             LKELKWRPD+RSLLSS L  T
Sbjct: 439  VLKELKWRPDSRSLLSSSLGET 460


>ref|XP_002510970.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223550085|gb|EEF51572.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 531

 Score =  538 bits (1385), Expect = e-150
 Identities = 277/461 (60%), Positives = 341/461 (73%), Gaps = 24/461 (5%)
 Frame = +2

Query: 2    DLWLKE-KALKHVVFKMQLD-------------KNRHQQKEEEMSKPSDFS------LLS 121
            D WLK  K LKHVVF MQL              K ++  K ++ +  S+FS      LLS
Sbjct: 28   DFWLKNTKPLKHVVFAMQLQSLASPTPTNDKDSKTKNITKTKDQTLISNFSNSDRTLLLS 87

Query: 122  DTLALQILIKLP--QQNPNSLVCKKWMCLLGQLVTSIKLLDWNFLESGRLVSRFPNLTHI 295
            D L L+IL  LP  Q+N N LVCK+W+ + G+LV S+K+LDW F+ESGRL++RFPNLTH+
Sbjct: 88   DELLLKILSTLPDTQKNHNFLVCKRWLNVQGRLVRSLKVLDWEFIESGRLIARFPNLTHV 147

Query: 296  DLASACIDSTKNSPILLTHRLISIHLDSEFI--VGNKFVCDDNLLSLEKIDRGLRVLARG 469
            DL + CI +  NS + L HR++S+ +DS  +  V N  +C+ NLL ++ +DRGL+ LA  
Sbjct: 148  DLMNGCIITPHNSTLWLNHRVLSMQIDSGVLGFVPNWNICEQNLLPVDIVDRGLKALACA 207

Query: 470  CPSLRKLVLISASEDGLSCVAEECPTLQELELHDCTDFALKGIVECKNLQILKLVGCVDG 649
            CP+LRKLV+I ASE GL  VAEEC TLQELELH C D  L+GI  C+NLQILKLVG V G
Sbjct: 208  CPNLRKLVVIGASELGLLSVAEECLTLQELELHKCNDNVLRGIAACENLQILKLVGNVGG 267

Query: 650  FYGSVISDIGLTILANGCKRLVKIELSGCEGSYDGIRAIGQCCDMLEEITFFDHRMDAGW 829
             Y S++SDIGLTILA G KRLVK+ELSGCEGS+DGI+AIGQCC MLEE+TF DHRMD GW
Sbjct: 268  LYSSLVSDIGLTILAQGSKRLVKLELSGCEGSFDGIKAIGQCCQMLEELTFSDHRMDDGW 327

Query: 830  IAALSFCGNLKTLRLISCKKVDPSPGPIEHLGSCPTLETLHLQRCQIRDKESANALFLVC 1009
            ++A+S+C NLKTLR +SCKK+D  PG  E LGSC  LE LHL +CQ+RDK S  A+F VC
Sbjct: 328  LSAISYCENLKTLRFLSCKKIDLHPGLDEFLGSCQALERLHLHKCQLRDKRSIRAMFKVC 387

Query: 1010 IAVRDVVIQDCWGMHNEMFAFASICRRVKFLSLEGCSLLTTDCLESVVLSWVELQQLKVV 1189
              VR++V QDCWG+ N+MF+FASICR+VK LSLEGCSLLTT  LESV+L++ ELQ L V 
Sbjct: 388  QGVREIVFQDCWGLDNDMFSFASICRKVKLLSLEGCSLLTTQGLESVLLTYNELQHLTVR 447

Query: 1190 SCNNIKDSEVTPAMSTLFSALKELKWRPDTRSLLSSDLAGT 1312
            SC  IKD EV+PA+STLFS LKELKWRPD +SLL+  L GT
Sbjct: 448  SCKRIKDYEVSPALSTLFSGLKELKWRPDAKSLLAPSLVGT 488


>emb|CBI38670.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  529 bits (1362), Expect = e-147
 Identities = 269/439 (61%), Positives = 333/439 (75%), Gaps = 5/439 (1%)
 Frame = +2

Query: 2    DLWLKE--KALKHVVFKMQLDK-NRHQQKEEEMSKPSDFSLLSDTLALQILIKLP--QQN 166
            +LW K   KAL HVVF M L    +HQ +  +        LLSD L L++  KLP  Q+ 
Sbjct: 25   NLWFKSPNKALNHVVFTMHLKSLTKHQLQPHKALIFDRTLLLSDELLLRVFQKLPESQRK 84

Query: 167  PNSLVCKKWMCLLGQLVTSIKLLDWNFLESGRLVSRFPNLTHIDLASACIDSTKNSPILL 346
            PNSLVCK+W+ L G+LV S+KLL+W+FLESGRLVSRFPNLT +DL  ACI   ++  +LL
Sbjct: 85   PNSLVCKRWLSLQGRLVQSVKLLEWDFLESGRLVSRFPNLTRVDLVHACIVWPRSCGVLL 144

Query: 347  THRLISIHLDSEFIVGNKFVCDDNLLSLEKIDRGLRVLARGCPSLRKLVLISASEDGLSC 526
             HR++S+ +DSE +  N F+ +  +L+   +DRGLR LA G P+LRKL ++ ASE GL  
Sbjct: 145  NHRVVSVPVDSE-VSQNGFLENGKVLASNVVDRGLRFLASGYPNLRKLAVVGASELGLLS 203

Query: 527  VAEECPTLQELELHDCTDFALKGIVECKNLQILKLVGCVDGFYGSVISDIGLTILANGCK 706
            VAEEC TLQELELH C+D  L+ I    NLQILKL+G  +G Y S++SD+GLTILA GC 
Sbjct: 204  VAEECSTLQELELHKCSDATLRAISGFGNLQILKLIGNAEGLYKSLVSDVGLTILAQGCT 263

Query: 707  RLVKIELSGCEGSYDGIRAIGQCCDMLEEITFFDHRMDAGWIAALSFCGNLKTLRLISCK 886
            RLVK+ELSGCEGSYDGI+AIGQCC MLEE+T  DHR+D GW++ALS+C NLKTLR  SC+
Sbjct: 264  RLVKLELSGCEGSYDGIKAIGQCCQMLEELTLSDHRLDGGWLSALSYCENLKTLRFQSCR 323

Query: 887  KVDPSPGPIEHLGSCPTLETLHLQRCQIRDKESANALFLVCIAVRDVVIQDCWGMHNEMF 1066
            ++D  PG  E+LGSCPTLE LHL +CQ+RDK S  AL+++  AVRD VIQDCWG+ N++ 
Sbjct: 324  RIDVCPGLDEYLGSCPTLERLHLHKCQLRDKLSMRALYMISGAVRDFVIQDCWGLDNDIL 383

Query: 1067 AFASICRRVKFLSLEGCSLLTTDCLESVVLSWVELQQLKVVSCNNIKDSEVTPAMSTLFS 1246
              A+ CRRVK LSLEGCSLLTT+ LES VLSW +LQ+L+VVSC NIKDSEV+PA+STLFS
Sbjct: 384  GLATTCRRVKLLSLEGCSLLTTEGLESAVLSWKDLQKLRVVSCKNIKDSEVSPALSTLFS 443

Query: 1247 ALKELKWRPDTRSLLSSDL 1303
             LKEL+WRPDTRSLLSS L
Sbjct: 444  ILKELQWRPDTRSLLSSSL 462


>ref|XP_002263969.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 478

 Score =  529 bits (1362), Expect = e-147
 Identities = 269/439 (61%), Positives = 333/439 (75%), Gaps = 5/439 (1%)
 Frame = +2

Query: 2    DLWLKE--KALKHVVFKMQLDK-NRHQQKEEEMSKPSDFSLLSDTLALQILIKLP--QQN 166
            +LW K   KAL HVVF M L    +HQ +  +        LLSD L L++  KLP  Q+ 
Sbjct: 25   NLWFKSPNKALNHVVFTMHLKSLTKHQLQPHKALIFDRTLLLSDELLLRVFQKLPESQRK 84

Query: 167  PNSLVCKKWMCLLGQLVTSIKLLDWNFLESGRLVSRFPNLTHIDLASACIDSTKNSPILL 346
            PNSLVCK+W+ L G+LV S+KLL+W+FLESGRLVSRFPNLT +DL  ACI   ++  +LL
Sbjct: 85   PNSLVCKRWLSLQGRLVQSVKLLEWDFLESGRLVSRFPNLTRVDLVHACIVWPRSCGVLL 144

Query: 347  THRLISIHLDSEFIVGNKFVCDDNLLSLEKIDRGLRVLARGCPSLRKLVLISASEDGLSC 526
             HR++S+ +DSE +  N F+ +  +L+   +DRGLR LA G P+LRKL ++ ASE GL  
Sbjct: 145  NHRVVSVPVDSE-VSQNGFLENGKVLASNVVDRGLRFLASGYPNLRKLAVVGASELGLLS 203

Query: 527  VAEECPTLQELELHDCTDFALKGIVECKNLQILKLVGCVDGFYGSVISDIGLTILANGCK 706
            VAEEC TLQELELH C+D  L+ I    NLQILKL+G  +G Y S++SD+GLTILA GC 
Sbjct: 204  VAEECSTLQELELHKCSDATLRAISGFGNLQILKLIGNAEGLYKSLVSDVGLTILAQGCT 263

Query: 707  RLVKIELSGCEGSYDGIRAIGQCCDMLEEITFFDHRMDAGWIAALSFCGNLKTLRLISCK 886
            RLVK+ELSGCEGSYDGI+AIGQCC MLEE+T  DHR+D GW++ALS+C NLKTLR  SC+
Sbjct: 264  RLVKLELSGCEGSYDGIKAIGQCCQMLEELTLSDHRLDGGWLSALSYCENLKTLRFQSCR 323

Query: 887  KVDPSPGPIEHLGSCPTLETLHLQRCQIRDKESANALFLVCIAVRDVVIQDCWGMHNEMF 1066
            ++D  PG  E+LGSCPTLE LHL +CQ+RDK S  AL+++  AVRD VIQDCWG+ N++ 
Sbjct: 324  RIDVCPGLDEYLGSCPTLERLHLHKCQLRDKLSMRALYMISGAVRDFVIQDCWGLDNDIL 383

Query: 1067 AFASICRRVKFLSLEGCSLLTTDCLESVVLSWVELQQLKVVSCNNIKDSEVTPAMSTLFS 1246
              A+ CRRVK LSLEGCSLLTT+ LES VLSW +LQ+L+VVSC NIKDSEV+PA+STLFS
Sbjct: 384  GLATTCRRVKLLSLEGCSLLTTEGLESAVLSWKDLQKLRVVSCKNIKDSEVSPALSTLFS 443

Query: 1247 ALKELKWRPDTRSLLSSDL 1303
             LKEL+WRPDTRSLLSS L
Sbjct: 444  ILKELQWRPDTRSLLSSSL 462


>ref|XP_003540579.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g07670-like [Glycine
            max]
          Length = 497

 Score =  525 bits (1353), Expect = e-146
 Identities = 267/450 (59%), Positives = 331/450 (73%), Gaps = 14/450 (3%)
 Frame = +2

Query: 2    DLWLKEKALKHVVFKMQLDKNRHQQKEEEMSKPSDFS----------LLSDTLALQILIK 151
            D+W K K L  +V  M+L       +     K +             LLSD L L+I+  
Sbjct: 24   DIWTKSKPLNQMVMAMKLHSLSSSPRISTTDKTNPILSPFPITDRTLLLSDALLLKIIAL 83

Query: 152  LP----QQNPNSLVCKKWMCLLGQLVTSIKLLDWNFLESGRLVSRFPNLTHIDLASACID 319
            +     Q+N NSLVCK+W+ L G+LV S+++ DWNFL SGRL+ RFPNL H+DL SA + 
Sbjct: 84   VSDSSTQRNSNSLVCKRWLNLQGRLVRSLRISDWNFLLSGRLIHRFPNLNHVDLLSAALI 143

Query: 320  STKNSPILLTHRLISIHLDSEFIVGNKFVCDDNLLSLEKIDRGLRVLARGCPSLRKLVLI 499
            S KNS ILL++R+IS+HLDS       F  +DN+L +E ID GL  LA GCP+LR+L +I
Sbjct: 144  SPKNSGILLSNRVISMHLDSNSSPNWCFF-EDNMLPVEVIDNGLTSLASGCPNLRRLHVI 202

Query: 500  SASEDGLSCVAEECPTLQELELHDCTDFALKGIVECKNLQILKLVGCVDGFYGSVISDIG 679
              +E GL  VAEEC TLQELEL  C+D  L+GI  C NLQILKLVG VDGFY SV+SDIG
Sbjct: 203  GTTEIGLLTVAEECSTLQELELQRCSDNVLRGIAACGNLQILKLVGHVDGFYDSVVSDIG 262

Query: 680  LTILANGCKRLVKIELSGCEGSYDGIRAIGQCCDMLEEITFFDHRMDAGWIAALSFCGNL 859
            LTILA GCKRLVK+ELSGCEGS+DGI+AIG+CC MLEE+TF DHRMD GW+AA+S+C NL
Sbjct: 263  LTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFSDHRMDDGWLAAISYCENL 322

Query: 860  KTLRLISCKKVDPSPGPIEHLGSCPTLETLHLQRCQIRDKESANALFLVCIAVRDVVIQD 1039
            KTLR  SCKK+DP+PG  E+LG CP LE LHLQ+CQ+RD++S  ALF VC AVR++VIQD
Sbjct: 323  KTLRFQSCKKIDPNPGMEEYLGCCPALERLHLQKCQLRDRKSVVALFSVCRAVREIVIQD 382

Query: 1040 CWGMHNEMFAFASICRRVKFLSLEGCSLLTTDCLESVVLSWVELQQLKVVSCNNIKDSEV 1219
            CWG+ N MF+ A IC RVK L LEGCSLLTT+ LESV+ SW +LQ L+VVSC NIKD+E+
Sbjct: 383  CWGLDNSMFSLAMICWRVKLLYLEGCSLLTTEGLESVIHSWKDLQSLRVVSCKNIKDNEI 442

Query: 1220 TPAMSTLFSALKELKWRPDTRSLLSSDLAG 1309
            +PA++TLF+ LKEL+W PDT+SLL S + G
Sbjct: 443  SPALATLFTTLKELRWSPDTKSLLPSSVKG 472