BLASTX nr result

ID: Coptis25_contig00020917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020917
         (1760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-10
emb|CAN71609.1| hypothetical protein VITISV_013246 [Vitis vinifera]    72   5e-10
ref|XP_003598938.1| hypothetical protein MTR_3g023670 [Medicago ...    58   5e-10
ref|XP_003560582.1| PREDICTED: uncharacterized protein LOC100825...    66   5e-10
ref|XP_003581634.1| PREDICTED: uncharacterized protein LOC100823...    65   6e-10

>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
            predicted protein [Populus trichocarpa]
          Length = 327

 Score = 58.2 bits (139), Expect(2) = 2e-10
 Identities = 29/85 (34%), Positives = 47/85 (55%)
 Frame = +1

Query: 757  KTQIFQRINKQWREFKSKLRSKHYDKCDTDLERIRNCPGGVPHKDWVIFVGNQSTPNAQA 936
            KT + + +  +WR +K+KL+S+HY    TD ER+ +    V  + W I +   ++  AQ 
Sbjct: 75   KTWVLRSLASKWRNWKAKLKSEHYYPHKTDEERLNDRDRRVLPEQWAILISYWNSEEAQL 134

Query: 937  RHSKGKSAREALKTPHTYGRRGAAR 1011
            R +K K+ R   K+ HT G +  AR
Sbjct: 135  RSAKNKANRSNQKSTHTAGSKSFAR 159



 Score = 35.0 bits (79), Expect(2) = 2e-10
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 515 GQPVGEGSISFVSYLGSVMR--KHCPISYEHWKDVPDQIKVMIWNLVTVCF 661
           GQPVG  +    ++LG+V R  +  P+++  W  +PD+ K  +W  V   F
Sbjct: 18  GQPVGPEASKLSTFLGTVARNGEMAPLTFVDWFAMPDEKKENMWQFVQTKF 68



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
 Frame = +3

Query: 1155 VYFNDYRQPMGEGSVSFTSNLGSLTRRH--CPITYEQWRDVPDQ----IWKRVTDRYIVT 1316
            V  N   QP+G  +   ++ LG++ R     P+T+  W  +PD+    +W+ V  ++ + 
Sbjct: 12   VPINTLGQPVGPEASKLSTFLGTVARNGEMAPLTFVDWFAMPDEKKENMWQFVQTKFDIE 71

Query: 1317 ARFKEQILKKVSKHWREFKSHLRSKYFDRYNIDEERKRNCPRGVRSKDWSIFVDNQSTPD 1496
               K  +L+ ++  WR +K+ L+S+++  +  DEER  +  R V  + W+I +   ++ +
Sbjct: 72   PVCKTWVLRSLASKWRNWKAKLKSEHYYPHKTDEERLNDRDRRVLPEQWAILISYWNSEE 131

Query: 1497 AQAR 1508
            AQ R
Sbjct: 132  AQLR 135


>emb|CAN71609.1| hypothetical protein VITISV_013246 [Vitis vinifera]
          Length = 1277

 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
 Frame = +3

Query: 1143 QKKVVYFNDYRQPMGEGSVS-FTSNLGSLTR--RHCPITYEQWR----DVPDQIWKRVTD 1301
            +KK   FN   Q + +G     +S +G+L R   + PI  + W     DV ++IW  V +
Sbjct: 932  EKKTTRFNTRGQVVYDGKGERLSSYMGTLVRSQHNVPIQVQDWNHVSEDVKEKIWALVLE 991

Query: 1302 RYIVTARFKEQILKKVSKHWREFKSHLRSKYFDRYNIDEERKRNCPRGVRSKDWSIFVDN 1481
            +Y +    K  IL+     +R +++ +++KY++ YN DEER  + P  +   DW   +  
Sbjct: 992  KYELEETXKSYILQCCGNLFRSYRNKMKAKYYNPYNTDEERLCHRPPHLSDDDWRWLIHF 1051

Query: 1482 QSTPDAQARRRRGYEDPTQI 1541
             STP+A+A+++    +P +I
Sbjct: 1052 WSTPEAKAQKKEDRSEPNRI 1071



 Score = 45.8 bits (107), Expect(2) = 2e-07
 Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
 Frame = +1

Query: 730  DDYTVSLTYKTQIFQRINKQWREFKSKLRSKHYDKCDTDLERIRNCPGGVPHKDWVIFVG 909
            + Y +  T K+ I Q     +R +++K+++K+Y+  +TD ER+ + P  +   DW   + 
Sbjct: 991  EKYELEETXKSYILQCCGNLFRSYRNKMKAKYYNPYNTDEERLCHRPPHLSDDDWRWLIH 1050

Query: 910  NQSTPNAQARHSKGKSAREALKT-PHTYGRRGAART---NKAMAERSVSLSHQKQSASPK 1077
              STP A+A+  + +S    ++    T+ R+        +K + ++   L  Q +  S  
Sbjct: 1051 FWSTPEAKAQKKEDRSEPNRIEMFALTHTRKDGTPVDDHSKEIMDQFQQLLSQPEGTSSS 1110

Query: 1078 VSRPSAA 1098
             S  S A
Sbjct: 1111 TSASSGA 1117



 Score = 37.0 bits (84), Expect(2) = 2e-07
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = +2

Query: 488  KKMAHFNGDGQPVGEGSISFVS-YLGSVMRK--HCPISYEHWKDVPDQIKVMIWNLVTVC 658
            KK   FN  GQ V +G    +S Y+G+++R   + PI  + W  V + +K  IW LV   
Sbjct: 933  KKTTRFNTRGQVVYDGKGERLSSYMGTLVRSQHNVPIQVQDWNHVSEDVKEKIWALVLEK 992

Query: 659  FRL 667
            + L
Sbjct: 993  YEL 995


>ref|XP_003598938.1| hypothetical protein MTR_3g023670 [Medicago truncatula]
            gi|355487986|gb|AES69189.1| hypothetical protein
            MTR_3g023670 [Medicago truncatula]
          Length = 497

 Score = 56.2 bits (134), Expect(2) = 5e-10
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +1

Query: 757  KTQIFQRINKQWREFKSKLRSKHYDKCDTDLE-RIRNCPGGVPHKDWVIFVGNQSTPNAQ 933
            K+ I   I ++W++ + +L  +HY K D  LE  + N P  +   DW +FV  +  P+ Q
Sbjct: 259  KSYILTSIGRKWKDERCRLFKEHY-KWDLPLEVNLANYPRHIGPTDWALFVAYRRKPDTQ 317

Query: 934  ARHSKGKSAREALKTPHTYGRRGAAR 1011
             +  K  + R+ L TPHT G++  AR
Sbjct: 318  KKAQKNVANRKKLTTPHTLGKKSLAR 343



 Score = 35.8 bits (81), Expect(2) = 5e-10
 Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = +2

Query: 452 IADFDIEGFSKPKKMAHFNGDGQPVGEGSISFVSYLGSVMRKH--CPISYEHWKDVPDQI 625
           + D  +E  +  + +  +NG  QPVGE +    S+LG++ R +   PI +E W  +P++ 
Sbjct: 180 VYDVLLESPNGTRIITRWNGR-QPVGEAAGFLASFLGTLARMYRDFPIMFESWDKIPEKT 238

Query: 626 KVMIWN 643
           K  +++
Sbjct: 239 KTKVYD 244



 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
 Frame = +3

Query: 1173 RQPMGEGSVSFTSNLGSLTR--RHCPITYEQWRDVPDQIWKRVTDRYIVTARF------K 1328
            RQP+GE +    S LG+L R  R  PI +E W  +P++   +V D  I T         K
Sbjct: 200  RQPVGEAAGFLASFLGTLARMYRDFPIMFESWDKIPEKTKTKVYDEKIKTKFVVDDGDNK 259

Query: 1329 EQILKKVSKHWREFKSHLRSKYFDRYNIDEERKRNCPRGVRSKDWSIFVDNQSTPDAQAR 1508
              IL  + + W++ +  L  +++      E    N PR +   DW++FV  +  PD Q +
Sbjct: 260  SYILTSIGRKWKDERCRLFKEHYKWDLPLEVNLANYPRHIGPTDWALFVAYRRKPDTQKK 319

Query: 1509 RRR 1517
             ++
Sbjct: 320  AQK 322


>ref|XP_003560582.1| PREDICTED: uncharacterized protein LOC100825363 [Brachypodium
            distachyon]
          Length = 313

 Score = 48.5 bits (114), Expect(2) = 5e-10
 Identities = 23/99 (23%), Positives = 44/99 (44%)
 Frame = +1

Query: 736  YTVSLTYKTQIFQRINKQWREFKSKLRSKHYDKCDTDLERIRNCPGGVPHKDWVIFVGNQ 915
            Y +  T  + ++   + +W+E+K+ L+   +D   TD + +R C   +  +DW   +   
Sbjct: 177  YELDSTALSYVYNTSHTKWKEWKADLKKTKFDPELTDAQLMRRCDERISKRDWATLIEYW 236

Query: 916  STPNAQARHSKGKSAREALKTPHTYGRRGAARTNKAMAE 1032
             +P   AR ++ K         HT G +  A     MA+
Sbjct: 237  RSPEFDARSARAKENLAKSTVSHTTGSKSHAHVTHEMAD 275



 Score = 43.5 bits (101), Expect(2) = 5e-10
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +2

Query: 482 KPKKMAHFNGDGQPVGEGSISFVSYLGSVMRKHCPISYEHWKDVP-DQIKVMIWNLVTVC 658
           KPK    FN  GQP G  +  F +++G+++RKH  ++   W+DV  +  K ++W+ +   
Sbjct: 117 KPKIKIPFNELGQPFGADATEFANFIGTLVRKHISLAKLDWRDVELEAQKSLVWDHLQAF 176

Query: 659 FRL 667
           + L
Sbjct: 177 YEL 179



 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
 Frame = +3

Query: 1140 KQKKVVYFNDYRQPMGEGSVSFTSNLGSLTRRHCPITYEQWRDVPDQ-----IWKRVTDR 1304
            K K  + FN+  QP G  +  F + +G+L R+H  +    WRDV  +     +W  +   
Sbjct: 117  KPKIKIPFNELGQPFGADATEFANFIGTLVRKHISLAKLDWRDVELEAQKSLVWDHLQAF 176

Query: 1305 YIVTARFKEQILKKVSKHWREFKSHLRSKYFDRYNIDEERKRNCPRGVRSKDWSIFVDNQ 1484
            Y + +     +       W+E+K+ L+   FD    D +  R C   +  +DW+  ++  
Sbjct: 177  YELDSTALSYVYNTSHTKWKEWKADLKKTKFDPELTDAQLMRRCDERISKRDWATLIEYW 236

Query: 1485 STPDAQARRRRGYED 1529
             +P+  AR  R  E+
Sbjct: 237  RSPEFDARSARAKEN 251


>ref|XP_003581634.1| PREDICTED: uncharacterized protein LOC100823437 [Brachypodium
           distachyon]
          Length = 1110

 Score = 45.8 bits (107), Expect(2) = 6e-10
 Identities = 17/54 (31%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
 Frame = +2

Query: 506 NGDGQPVGEGSISFVSYLGSVMRKH--CPISYEHWKDVPDQIKVMIWNLVTVCF 661
           N  G P+G+ +  F+++LG++ R     P++Y+ WK +P + K ++W++V + F
Sbjct: 790 NNSGLPIGKNAAMFITFLGTLARDGMLAPLTYQSWKSIPKENKNVLWHIVKLKF 843



 Score = 45.8 bits (107), Expect(2) = 6e-10
 Identities = 26/82 (31%), Positives = 42/82 (51%)
 Frame = +1

Query: 766  IFQRINKQWREFKSKLRSKHYDKCDTDLERIRNCPGGVPHKDWVIFVGNQSTPNAQARHS 945
            + + I K WR +KS L+ KHYD   T+ ER+ +    V  + W   V   +T  A+ R +
Sbjct: 853  VLKCIRKTWRCWKSHLKRKHYDSHTTEEERLADRDPRVLKEQWRQLVAYWNTEKAKVRSA 912

Query: 946  KGKSAREALKTPHTYGRRGAAR 1011
            K K++R      ++ G +  AR
Sbjct: 913  KSKASRAKSTYINSTGSKSFAR 934



 Score = 65.1 bits (157), Expect = 6e-08
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
 Frame = +3

Query: 1119 KTYFGPFKQKKVVYFNDYRQPMGEGSVSFTSNLGSLTRRH--CPITYEQWRDVPDQ---- 1280
            K +  P   +  V  N+   P+G+ +  F + LG+L R     P+TY+ W+ +P +    
Sbjct: 775  KVWILPEGVRLPVSLNNSGLPIGKNAAMFITFLGTLARDGMLAPLTYQSWKSIPKENKNV 834

Query: 1281 IWKRVTDRYIVTARFKEQILKKVSKHWREFKSHLRSKYFDRYNIDEERKRNCPRGVRSKD 1460
            +W  V  ++ V    +  +LK + K WR +KSHL+ K++D +  +EER  +    V  + 
Sbjct: 835  LWHIVKLKFDVDPPCELSVLKCIRKTWRCWKSHLKRKHYDSHTTEEERLADRDPRVLKEQ 894

Query: 1461 WSIFVDNQSTPDAQAR 1508
            W   V   +T  A+ R
Sbjct: 895  WRQLVAYWNTEKAKVR 910


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